| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is fabH
Identifier: 91789500
GI number: 91789500
Start: 3849620
End: 3850597
Strand: Reverse
Name: fabH
Synonym: Bpro_3650
Alternate gene names: 91789500
Gene position: 3850597-3849620 (Counterclockwise)
Preceding gene: 91789501
Following gene: 91789499
Centisome position: 74.05
GC content: 62.17
Gene sequence:
>978_bases ATGACCCGTTATTCACGCATCACTGGCACCGGTAGTTATTTGCCACCGCGCCGACTGACCAATGCCGAGCTGGCCGCTGA GCTGGCCACCAAGGGCGTTGAAACTTCCGACGAATGGATTGTGGAGCGCACCGGCATCCGGGCCCGCCATTTCGCCGCGC CCGATGTGTCCAGCAGCGACCTCGCCGTGAAAGCTGCCCGGCACGCGCTGGAGGCGGCAGGCCGTCAGGCGTCCGACATT GACCTGATCATTGTTGCGACGTCGACGCCAGACATGGTGTTTCCCTCCGCCGCGTGCATCGTGCAGAACAAACTCGGTAT TGCGGGTTGCCCCGCCTTTGATGTCCAGGCCGTTTGCAGTGGATTTGTTTATGCACTGACCGTGGCCGACGCGTTGATCA AAACCGGCTCGGCCACCAAGGCGCTGGTTATTGGCGCGGAAGTGTTCTCGCGCATCCTGGATTTTTCGGACAGGACCACC TGCGTGCTGTTTGGCGATGGCGCAGGTGCCGTGGTGCTGGAAGCGTCGGAGACGCCCGGCATCCTTGCCAGCGATCTGCA TGCTGACGGCAAGCATGTCGGCATCCTGTGCGTACCGGGCAATGTATCGGGTGGCCAGGTGCTGGGCGATCCCCTCCTCA AAATGGACGGGCAGGCCGTGTTCAAGCTGGCCGTTGGCGTTCTTGAAAGCTCGGCCCGGGCCGCGCTGGCCAAAGCCAAC CTGCGGGATACGGATATCGACTGGCTGATTCCGCACCAGGCCAACATCCGCATCATGCAGAGCACAGCGAAGAAGCTGAA GGTGCCCCCGGAAAAGCTGATCGTCACGGTCGACGAGCATGGCAACACCTCGGCAGCGTCCATCCCGCTGGCGCTGGATG CGTCCGTGCGCAGCGGCAAGGTGAAAAAAGGTGACACCCTCATGCTCGAAGGCGTGGGCGGCGGCTTTACCTGGGGTGCG GTGCTTCTCAACTATTGA
Upstream 100 bases:
>100_bases GTTGCTGGTTGCAGCACAGATGGCACCGGCCAGTGATGGAGTGAGTGCGGTTTCTTCGATGGCAGTTGACCCAGCAGTCT CTACACCGGCACACTAATCA
Downstream 100 bases:
>100_bases GAGATGACTCCATGTATTTCCCGGCCAGCTACTGACCGACAGGTGGCCGCTTGAGTCTCGGACCGTCAGGCGTGTGGATG CCATTGCAATCCTGCTGCTG
Product: 3-oxoacyl-(acyl carrier protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MTRYSRITGTGSYLPPRRLTNAELAAELATKGVETSDEWIVERTGIRARHFAAPDVSSSDLAVKAARHALEAAGRQASDI DLIIVATSTPDMVFPSAACIVQNKLGIAGCPAFDVQAVCSGFVYALTVADALIKTGSATKALVIGAEVFSRILDFSDRTT CVLFGDGAGAVVLEASETPGILASDLHADGKHVGILCVPGNVSGGQVLGDPLLKMDGQAVFKLAVGVLESSARAALAKAN LRDTDIDWLIPHQANIRIMQSTAKKLKVPPEKLIVTVDEHGNTSAASIPLALDASVRSGKVKKGDTLMLEGVGGGFTWGA VLLNY
Sequences:
>Translated_325_residues MTRYSRITGTGSYLPPRRLTNAELAAELATKGVETSDEWIVERTGIRARHFAAPDVSSSDLAVKAARHALEAAGRQASDI DLIIVATSTPDMVFPSAACIVQNKLGIAGCPAFDVQAVCSGFVYALTVADALIKTGSATKALVIGAEVFSRILDFSDRTT CVLFGDGAGAVVLEASETPGILASDLHADGKHVGILCVPGNVSGGQVLGDPLLKMDGQAVFKLAVGVLESSARAALAKAN LRDTDIDWLIPHQANIRIMQSTAKKLKVPPEKLIVTVDEHGNTSAASIPLALDASVRSGKVKKGDTLMLEGVGGGFTWGA VLLNY >Mature_324_residues TRYSRITGTGSYLPPRRLTNAELAAELATKGVETSDEWIVERTGIRARHFAAPDVSSSDLAVKAARHALEAAGRQASDID LIIVATSTPDMVFPSAACIVQNKLGIAGCPAFDVQAVCSGFVYALTVADALIKTGSATKALVIGAEVFSRILDFSDRTTC VLFGDGAGAVVLEASETPGILASDLHADGKHVGILCVPGNVSGGQVLGDPLLKMDGQAVFKLAVGVLESSARAALAKANL RDTDIDWLIPHQANIRIMQSTAKKLKVPPEKLIVTVDEHGNTSAASIPLALDASVRSGKVKKGDTLMLEGVGGGFTWGAV LLNY
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family
Homologues:
Organism=Escherichia coli, GI1787333, Length=322, Percent_Identity=51.2422360248447, Blast_Score=326, Evalue=2e-90,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FABH_POLSJ (Q126I8)
Other databases:
- EMBL: CP000316 - RefSeq: YP_550452.1 - ProteinModelPortal: Q126I8 - SMR: Q126I8 - STRING: Q126I8 - GeneID: 4013679 - GenomeReviews: CP000316_GR - KEGG: pol:Bpro_3650 - NMPDR: fig|296591.1.peg.5123 - eggNOG: COG0332 - HOGENOM: HBG649927 - OMA: NARILHA - PhylomeDB: Q126I8 - ProtClustDB: PRK09352 - BioCyc: PSP296591:BPRO_3650-MONOMER - GO: GO:0005737 - HAMAP: MF_01815 - InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 - Gene3D: G3DSA:3.40.47.10 - TIGRFAMs: TIGR00747
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C; SSF53901 Thiolase-like
EC number: =2.3.1.41
Molecular weight: Translated: 33890; Mature: 33759
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: ACT_SITE 119-119 ACT_SITE 252-252 ACT_SITE 282-282
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRYSRITGTGSYLPPRRLTNAELAAELATKGVETSDEWIVERTGIRARHFAAPDVSSSD CCCCCEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCEEEECCCCCCCCH LAVKAARHALEAAGRQASDIDLIIVATSTPDMVFPSAACIVQNKLGIAGCPAFDVQAVCS HHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHEEEECCCCCCCCCCCCHHHHHH GFVYALTVADALIKTGSATKALVIGAEVFSRILDFSDRTTCVLFGDGAGAVVLEASETPG HHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCCC ILASDLHADGKHVGILCVPGNVSGGQVLGDPLLKMDGQAVFKLAVGVLESSARAALAKAN EEEECCCCCCCEEEEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC LRDTDIDWLIPHQANIRIMQSTAKKLKVPPEKLIVTVDEHGNTSAASIPLALDASVRSGK CCCCCCCEECCCCCCEEEEEHHHHHHCCCHHHEEEEECCCCCCCCEEEEEEEECCCCCCC VKKGDTLMLEGVGGGFTWGAVLLNY CCCCCEEEEEECCCCEEEHEEEECC >Mature Secondary Structure TRYSRITGTGSYLPPRRLTNAELAAELATKGVETSDEWIVERTGIRARHFAAPDVSSSD CCCCEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCEEEECCCCCCCCH LAVKAARHALEAAGRQASDIDLIIVATSTPDMVFPSAACIVQNKLGIAGCPAFDVQAVCS HHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHEEEECCCCCCCCCCCCHHHHHH GFVYALTVADALIKTGSATKALVIGAEVFSRILDFSDRTTCVLFGDGAGAVVLEASETPG HHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCCC ILASDLHADGKHVGILCVPGNVSGGQVLGDPLLKMDGQAVFKLAVGVLESSARAALAKAN EEEECCCCCCCEEEEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC LRDTDIDWLIPHQANIRIMQSTAKKLKVPPEKLIVTVDEHGNTSAASIPLALDASVRSGK CCCCCCCEECCCCCCEEEEEHHHHHHCCCHHHEEEEECCCCCCCCEEEEEEEECCCCCCC VKKGDTLMLEGVGGGFTWGAVLLNY CCCCCEEEEEECCCCEEEHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA