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The map label for this gene is osmF [H]

Identifier: 91789479

GI number: 91789479

Start: 3831366

End: 3831932

Strand: Reverse

Name: osmF [H]

Synonym: Bpro_3629

Alternate gene names: 91789479

Gene position: 3831932-3831366 (Counterclockwise)

Preceding gene: 91789480

Following gene: 91789478

Centisome position: 73.69

GC content: 60.14

Gene sequence:

>567_bases
ATGAAATCAATCCAACGCAGGGCCGCCATGCTGCTGGTCGGTGCTCTGGCGGCAGGCGGGGTGCTGGCGCAGGGGGTAGC
GCCAGTTCGGGTCGGCTCCAAAATCGACACCGAGGGAAAGCTGCTGGGCAACATGATTGTCCTGGCGCTGGAGGCCAACG
GCATCAAGACCGAAAACAAAGCCTCGCTGGGAAACACCAAGGTCGTGCGTGGCGCCATCACGGCCGGCGAAATTGATCTT
TACCCGGAGTACACCGGCAACGGCGCTTTTATCTTCTCGGAAGAATCCAGCCCGGTCTGGAAGAACGCCAAGGCGGGCTA
CGAGCGCGTCAAGACGCTGGACTACGACAAAAACAAAATCGTCTGGCTCGAGCCCTCGCCGGCCAACAACACTTGGGCGA
TTGCCGTTCGCAAAGAGGTGGCGAACGCCAACAAGCTCAAGACCCTGGACGATTTGGGCAAGTGGATCACGGGCGGCGGG
CAGTTCAAGCTCGCGGCATCGGCTGAGTTTGTCGAGCGGTCTGATGCGTTGCCGGCTTTTCAGGCGGCCTACAATGTGGT
GGTCTAA

Upstream 100 bases:

>100_bases
CTTTCGATTCAATCGTTACAGCCCACTAGCCGAGGCCGGTCAGTCTAAGGTATCGTCAAATCCTCTTCGTCCACTTTTCC
TTTGTTTGGGAGTACTCACC

Downstream 100 bases:

>100_bases
TTTAAACAGACACAACGATAGGTTTTTTCAAACCTAAATGGCGCAAGACGTGAAAAATCAGAAATCCCGAAGAACCTTTG
ATGCGAGCTTCAAGCTCCAG

Product: ABC type periplasmic choline/glycine/betaine-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKSIQRRAAMLLVGALAAGGVLAQGVAPVRVGSKIDTEGKLLGNMIVLALEANGIKTENKASLGNTKVVRGAITAGEIDL
YPEYTGNGAFIFSEESSPVWKNAKAGYERVKTLDYDKNKIVWLEPSPANNTWAIAVRKEVANANKLKTLDDLGKWITGGG
QFKLAASAEFVERSDALPAFQAAYNVVV

Sequences:

>Translated_188_residues
MKSIQRRAAMLLVGALAAGGVLAQGVAPVRVGSKIDTEGKLLGNMIVLALEANGIKTENKASLGNTKVVRGAITAGEIDL
YPEYTGNGAFIFSEESSPVWKNAKAGYERVKTLDYDKNKIVWLEPSPANNTWAIAVRKEVANANKLKTLDDLGKWITGGG
QFKLAASAEFVERSDALPAFQAAYNVVV
>Mature_188_residues
MKSIQRRAAMLLVGALAAGGVLAQGVAPVRVGSKIDTEGKLLGNMIVLALEANGIKTENKASLGNTKVVRGAITAGEIDL
YPEYTGNGAFIFSEESSPVWKNAKAGYERVKTLDYDKNKIVWLEPSPANNTWAIAVRKEVANANKLKTLDDLGKWITGGG
QFKLAASAEFVERSDALPAFQAAYNVVV

Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=169, Percent_Identity=62.7218934911243, Blast_Score=229, Evalue=1e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 20052; Mature: 20052

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIQRRAAMLLVGALAAGGVLAQGVAPVRVGSKIDTEGKLLGNMIVLALEANGIKTENK
CCHHHHHHHHHHHHHHHHCCHHHCCCCCEEECCCCCCCCCEEEEEEEEEEECCCCCCCCC
ASLGNTKVVRGAITAGEIDLYPEYTGNGAFIFSEESSPVWKNAKAGYERVKTLDYDKNKI
CCCCCCEEEEEEEEECEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEE
VWLEPSPANNTWAIAVRKEVANANKLKTLDDLGKWITGGGQFKLAASAEFVERSDALPAF
EEECCCCCCCEEEEEEEHHHCCCCCCCCHHHHHHHHCCCCCEEEECCHHHHHHCCCCHHH
QAAYNVVV
HHHHEECC
>Mature Secondary Structure
MKSIQRRAAMLLVGALAAGGVLAQGVAPVRVGSKIDTEGKLLGNMIVLALEANGIKTENK
CCHHHHHHHHHHHHHHHHCCHHHCCCCCEEECCCCCCCCCEEEEEEEEEEECCCCCCCCC
ASLGNTKVVRGAITAGEIDLYPEYTGNGAFIFSEESSPVWKNAKAGYERVKTLDYDKNKI
CCCCCCEEEEEEEEECEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEE
VWLEPSPANNTWAIAVRKEVANANKLKTLDDLGKWITGGGQFKLAASAEFVERSDALPAF
EEECCCCCCCEEEEEEEHHHCCCCCCCCHHHHHHHHCCCCCEEEECCHHHHHHCCCCHHH
QAAYNVVV
HHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]