| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789472
Identifier: 91789472
GI number: 91789472
Start: 3824766
End: 3826100
Strand: Reverse
Name: 91789472
Synonym: Bpro_3621
Alternate gene names: NA
Gene position: 3826100-3824766 (Counterclockwise)
Preceding gene: 91789474
Following gene: 91789462
Centisome position: 73.58
GC content: 61.12
Gene sequence:
>1335_bases ATGAACAACGTCACAACCATTGCACCCTGTCGCGTCAACCTGGCTTTGCAGGGCGGTGGCTCGCACGGCGCCTTCACATG GGGCGTGCTCGACGCGCTGCTCGAAGACGGGCGCATCGATATCGAGGGAATGAGCGGCACCAGCGCAGGGGCCATGAATG CGGTGGCGCTGGCGCATGGTTTTGCCGGTGCCGAGGGAAAATCCAGAGTGCAGCAGCATGACGCAGCACGCGAAGCGCTG GCCAGCTTCTGGAACGGCATCGTCAACATGGGCGCGCTGTCGTCATCGATGTCCAAAATGCAGCGCGCTCCGTTTGACAT CCTGTTCGGCCACATGACGATGGGGACGTCTGCGGGACCGTCCAGGTTATGGACCGATGCCATGACCCGCTACTGGGCCA ATACGCTGTCGCCTTACCAGAGCAACCCCTTTGACATCAACCCCCTCAGGAAATTCCTGGAAGGCCAGGTCGATTTCGAA CGGCTGGCGGCTGCCCGTGACCCCGGTACGCCCAAGGTATTTGTGGTGGCCACGCGCGTCAGCAGCGGCAAGGCCGAGGT GTTTTCAGGCAAACGCCTGACGGCCAGTGCCGTGATGGCATCGGCCTGCCTGCCGATGGTGTTCCAGGCGGTGGAGATTG AAGGCAGTCATTTCTGGGACGGTGGTTATTCGGGTAATCCTGCGATCCATCCACTGATTTACCACTGCAACAGCCGCGAT ATCGTGCTGGTGCAGATCAATCCCATCAAGCGCGAGTCGCTGCCGACCAACGCGAACGAGATCATGGACCGCATCAATGA AATCACCTTCAATGCCGGGTTGATTGCCGAGATGCGTGCCATTGATTTCGTCAAGCGCCTGCTGGCCGAAGGCAAGCTCG ATCCGGGGCATTACAAGAATGTGCTGATGCACCGGGTGGACGGTGGCGAGGCGCTTGAGCGGTTCACGGCCTCGACCAAG TCATCGACCGAGGCCAGCCTGATTCACGGTCTGCGTGACCTGGGCGTCCGGTGCGGCAAGGAGTGGCTGGACAAGCACTA CCCGGCGCTGGGCGTGAAGGACAGTGTGAACATTGCGCGGGATTATCTTGATGATTTGCGCATGCCGGTGACGAATGCGA ATGGGCAGCCGGCGCACCCGGAACGCCCGCAAGCCGTAGAGGCCAGCGAGCGCGGCAAGCCGGCAACCTTGCCTCCAGTA TCAACGGGTGCCGTCAAGGTATCGGCACCAGTACAGGCCCCCGCGCCTGCACCCGCAGCACGCAAGACCGTGCGCCACAA AATCCGCTCTGTTCTGGACAACTACCTGCACAAGCTCAAAAAGCGCAAGGGCTGA
Upstream 100 bases:
>100_bases AGGTGTTTCCCGGATGCGGGGGAAGCCTCCTGATTTTAGTCGTGTGGCTGCCAAGACGCGTGTGGCGGGCGCTGACACCA TTTTTTGCTAACCTTGGCCC
Downstream 100 bases:
>100_bases ACCGGGTCCGGCCTGTCCGGCGTGTTGCCTGCGCAGGCGCGCCCCTGCGGCGCGCTTACGCTTCGCGGCGTAGCGCGGGG AACAAGATCACATCGCGAAT
Product: patatin
Products: NA
Alternate protein names: Alpha-Beta Hydrolase Family Esterase; Patatin-Like Phospholipase; Patatin Family Phospholipase; Phospholipase Patatin Family; Transmembrane Protein; Esterase Of Alpha-Beta Hydrolase Superfamily; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Serine Protease; Patatin-Like Phospholipase Domain-Containing Protein; FabD/Lysophospholipase-Like Esterase; FabD/Lysophospholipase-Like Protein; Patatin-Like Phospholipase Family; FabD/Lysophospholipase; Esterase; Dehydrogenase/Reductase; Alpha/Beta Fold Family Hydrolase; Phospholipase Patatin Family Protein; Phospholipase
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MNNVTTIAPCRVNLALQGGGSHGAFTWGVLDALLEDGRIDIEGMSGTSAGAMNAVALAHGFAGAEGKSRVQQHDAAREAL ASFWNGIVNMGALSSSMSKMQRAPFDILFGHMTMGTSAGPSRLWTDAMTRYWANTLSPYQSNPFDINPLRKFLEGQVDFE RLAAARDPGTPKVFVVATRVSSGKAEVFSGKRLTASAVMASACLPMVFQAVEIEGSHFWDGGYSGNPAIHPLIYHCNSRD IVLVQINPIKRESLPTNANEIMDRINEITFNAGLIAEMRAIDFVKRLLAEGKLDPGHYKNVLMHRVDGGEALERFTASTK SSTEASLIHGLRDLGVRCGKEWLDKHYPALGVKDSVNIARDYLDDLRMPVTNANGQPAHPERPQAVEASERGKPATLPPV STGAVKVSAPVQAPAPAPAARKTVRHKIRSVLDNYLHKLKKRKG
Sequences:
>Translated_444_residues MNNVTTIAPCRVNLALQGGGSHGAFTWGVLDALLEDGRIDIEGMSGTSAGAMNAVALAHGFAGAEGKSRVQQHDAAREAL ASFWNGIVNMGALSSSMSKMQRAPFDILFGHMTMGTSAGPSRLWTDAMTRYWANTLSPYQSNPFDINPLRKFLEGQVDFE RLAAARDPGTPKVFVVATRVSSGKAEVFSGKRLTASAVMASACLPMVFQAVEIEGSHFWDGGYSGNPAIHPLIYHCNSRD IVLVQINPIKRESLPTNANEIMDRINEITFNAGLIAEMRAIDFVKRLLAEGKLDPGHYKNVLMHRVDGGEALERFTASTK SSTEASLIHGLRDLGVRCGKEWLDKHYPALGVKDSVNIARDYLDDLRMPVTNANGQPAHPERPQAVEASERGKPATLPPV STGAVKVSAPVQAPAPAPAARKTVRHKIRSVLDNYLHKLKKRKG >Mature_444_residues MNNVTTIAPCRVNLALQGGGSHGAFTWGVLDALLEDGRIDIEGMSGTSAGAMNAVALAHGFAGAEGKSRVQQHDAAREAL ASFWNGIVNMGALSSSMSKMQRAPFDILFGHMTMGTSAGPSRLWTDAMTRYWANTLSPYQSNPFDINPLRKFLEGQVDFE RLAAARDPGTPKVFVVATRVSSGKAEVFSGKRLTASAVMASACLPMVFQAVEIEGSHFWDGGYSGNPAIHPLIYHCNSRD IVLVQINPIKRESLPTNANEIMDRINEITFNAGLIAEMRAIDFVKRLLAEGKLDPGHYKNVLMHRVDGGEALERFTASTK SSTEASLIHGLRDLGVRCGKEWLDKHYPALGVKDSVNIARDYLDDLRMPVTNANGQPAHPERPQAVEASERGKPATLPPV STGAVKVSAPVQAPAPAPAARKTVRHKIRSVLDNYLHKLKKRKG
Specific function: Unknown
COG id: COG1752
COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48040; Mature: 48040
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNVTTIAPCRVNLALQGGGSHGAFTWGVLDALLEDGRIDIEGMSGTSAGAMNAVALAHG CCCCCEEECEEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHC FAGAEGKSRVQQHDAAREALASFWNGIVNMGALSSSMSKMQRAPFDILFGHMTMGTSAGP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEHHHHCCCCCCC SRLWTDAMTRYWANTLSPYQSNPFDINPLRKFLEGQVDFERLAAARDPGTPKVFVVATRV HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCCCCCEEEEEEEEC SSGKAEVFSGKRLTASAVMASACLPMVFQAVEIEGSHFWDGGYSGNPAIHPLIYHCNSRD CCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHEECCCEEECCCCCCCCCCCEEEEEECCCC IVLVQINPIKRESLPTNANEIMDRINEITFNAGLIAEMRAIDFVKRLLAEGKLDPGHYKN EEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH VLMHRVDGGEALERFTASTKSSTEASLIHGLRDLGVRCGKEWLDKHYPALGVKDSVNIAR HHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH DYLDDLRMPVTNANGQPAHPERPQAVEASERGKPATLPPVSTGAVKVSAPVQAPAPAPAA HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEECCCCCCCCCHHH RKTVRHKIRSVLDNYLHKLKKRKG HHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNNVTTIAPCRVNLALQGGGSHGAFTWGVLDALLEDGRIDIEGMSGTSAGAMNAVALAHG CCCCCEEECEEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHC FAGAEGKSRVQQHDAAREALASFWNGIVNMGALSSSMSKMQRAPFDILFGHMTMGTSAGP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEHHHHCCCCCCC SRLWTDAMTRYWANTLSPYQSNPFDINPLRKFLEGQVDFERLAAARDPGTPKVFVVATRV HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCCCCCEEEEEEEEC SSGKAEVFSGKRLTASAVMASACLPMVFQAVEIEGSHFWDGGYSGNPAIHPLIYHCNSRD CCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHEECCCEEECCCCCCCCCCCEEEEEECCCC IVLVQINPIKRESLPTNANEIMDRINEITFNAGLIAEMRAIDFVKRLLAEGKLDPGHYKN EEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH VLMHRVDGGEALERFTASTKSSTEASLIHGLRDLGVRCGKEWLDKHYPALGVKDSVNIAR HHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH DYLDDLRMPVTNANGQPAHPERPQAVEASERGKPATLPPVSTGAVKVSAPVQAPAPAPAA HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEECCCCCCCCCHHH RKTVRHKIRSVLDNYLHKLKKRKG HHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA