| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789435
Identifier: 91789435
GI number: 91789435
Start: 3782901
End: 3783674
Strand: Reverse
Name: 91789435
Synonym: Bpro_3582
Alternate gene names: NA
Gene position: 3783674-3782901 (Counterclockwise)
Preceding gene: 91789436
Following gene: 91789428
Centisome position: 72.76
GC content: 63.05
Gene sequence:
>774_bases ATGAAAAGAGACGGCCGCACCCTGGACCACGCCACGCTGGAAGAATTTCGCCTGCTGGCGCTGCGCCGGGTGCGCGAAGG CGAGAAGCCCTCGGCGGTGGTGAGGTCCCTGGGCATGAACCGCACCTCGATCTACCGCTGGCTCAAAGCGGCATCGGGAC GCGGCAAAGGAGAGCGGGCGCTGGCCTCGCGTCCTGCCACGGGACGCCCCTGCAAATTGACAGCGACCCAGCAAGCTCAG GTCTTTCGCTGGATCAACGGCAAGGACCCCAGGCAGTACGGGCTGGACTTCGGATTGTGGACACGCCAGATCGCAGCCAC CCTGATCGAGAAAAAGTTTGGTCTGAAGCTGGGCGTCACGGCCGTCGGCAGAATGCTGGCCCGTCTGGGCTTGAGCCCGC AAAAGCCACTGCAGCGTGCCTACCAGCGCGACCCGCAAGCCATCGAGCGCTGGCAGCGCGAAACCTATCCGGGCATTGCG GCGGCTGCGCGGCAAAGCGGCGCAGACATCTATTTCTGGGACGAGTCGGGCTTTCGTGCCGACACAGTGCATGGCAAGAC TTGGGGCGTCAAGGGCAAGACGCCCGTCATCGAGCGTCCCGGCCAGCGCCAGTCGATCTCGGCGGCCTCGGCGGTCAATG CCAAGGGGGGCTTCTGGTTTGCCACCTACCAAGGGGGTCTGACGGCAGAGCTGTTTGTAGTGTGGTGGTCAAGTTATTTC GGACACATCGATAGGTTGTTGAGTTGCCGATTTTTGCTCGAAGGCAATGGGTGA
Upstream 100 bases:
>100_bases TGGCTCGACTTTACCCGCCGTGAAAATTGAACTTACTCACCAGTCCGAAATTAGAGCGACAAGTTGGGAACTTGAGCGAG AGGTGATAGTCTGATGGTGC
Downstream 100 bases:
>100_bases CAAATTTCCCAGTTTTGAATGCAGTCGTTCACAGTTGTAGAAGCCGACGATGTAGTCAGCAACGTCGTTTGTGGCCTCAC TGTGATTTGCGTAGTCTTTT
Product: transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivatives; ISXo7 Transposase; Helix-Turn-Helix Type; ISXoo2 Transposase; Transposase And Inactivated Derivatives-Like Protein; Transposase ISC; Transposase IS; Transposase Of IS; Cation Diffusion Facilitator Family Transporter; Isxo7 Transposase; Transposase Fragmentary Gene
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MKRDGRTLDHATLEEFRLLALRRVREGEKPSAVVRSLGMNRTSIYRWLKAASGRGKGERALASRPATGRPCKLTATQQAQ VFRWINGKDPRQYGLDFGLWTRQIAATLIEKKFGLKLGVTAVGRMLARLGLSPQKPLQRAYQRDPQAIERWQRETYPGIA AAARQSGADIYFWDESGFRADTVHGKTWGVKGKTPVIERPGQRQSISAASAVNAKGGFWFATYQGGLTAELFVVWWSSYF GHIDRLLSCRFLLEGNG
Sequences:
>Translated_257_residues MKRDGRTLDHATLEEFRLLALRRVREGEKPSAVVRSLGMNRTSIYRWLKAASGRGKGERALASRPATGRPCKLTATQQAQ VFRWINGKDPRQYGLDFGLWTRQIAATLIEKKFGLKLGVTAVGRMLARLGLSPQKPLQRAYQRDPQAIERWQRETYPGIA AAARQSGADIYFWDESGFRADTVHGKTWGVKGKTPVIERPGQRQSISAASAVNAKGGFWFATYQGGLTAELFVVWWSSYF GHIDRLLSCRFLLEGNG >Mature_257_residues MKRDGRTLDHATLEEFRLLALRRVREGEKPSAVVRSLGMNRTSIYRWLKAASGRGKGERALASRPATGRPCKLTATQQAQ VFRWINGKDPRQYGLDFGLWTRQIAATLIEKKFGLKLGVTAVGRMLARLGLSPQKPLQRAYQRDPQAIERWQRETYPGIA AAARQSGADIYFWDESGFRADTVHGKTWGVKGKTPVIERPGQRQSISAASAVNAKGGFWFATYQGGLTAELFVVWWSSYF GHIDRLLSCRFLLEGNG
Specific function: Unknown
COG id: COG3415
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28801; Mature: 28801
Theoretical pI: Translated: 11.22; Mature: 11.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRDGRTLDHATLEEFRLLALRRVREGEKPSAVVRSLGMNRTSIYRWLKAASGRGKGERA CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHH LASRPATGRPCKLTATQQAQVFRWINGKDPRQYGLDFGLWTRQIAATLIEKKFGLKLGVT HHCCCCCCCCEEEEEHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCEECHH AVGRMLARLGLSPQKPLQRAYQRDPQAIERWQRETYPGIAAAARQSGADIYFWDESGFRA HHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHCCCCEEEEECCCCCEE DTVHGKTWGVKGKTPVIERPGQRQSISAASAVNAKGGFWFATYQGGLTAELFVVWWSSYF ECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHH GHIDRLLSCRFLLEGNG HHHHHHHHHHHEEECCC >Mature Secondary Structure MKRDGRTLDHATLEEFRLLALRRVREGEKPSAVVRSLGMNRTSIYRWLKAASGRGKGERA CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHH LASRPATGRPCKLTATQQAQVFRWINGKDPRQYGLDFGLWTRQIAATLIEKKFGLKLGVT HHCCCCCCCCEEEEEHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCEECHH AVGRMLARLGLSPQKPLQRAYQRDPQAIERWQRETYPGIAAAARQSGADIYFWDESGFRA HHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHCCCCEEEEECCCCCEE DTVHGKTWGVKGKTPVIERPGQRQSISAASAVNAKGGFWFATYQGGLTAELFVVWWSSYF ECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHH GHIDRLLSCRFLLEGNG HHHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA