Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91789435

Identifier: 91789435

GI number: 91789435

Start: 3782901

End: 3783674

Strand: Reverse

Name: 91789435

Synonym: Bpro_3582

Alternate gene names: NA

Gene position: 3783674-3782901 (Counterclockwise)

Preceding gene: 91789436

Following gene: 91789428

Centisome position: 72.76

GC content: 63.05

Gene sequence:

>774_bases
ATGAAAAGAGACGGCCGCACCCTGGACCACGCCACGCTGGAAGAATTTCGCCTGCTGGCGCTGCGCCGGGTGCGCGAAGG
CGAGAAGCCCTCGGCGGTGGTGAGGTCCCTGGGCATGAACCGCACCTCGATCTACCGCTGGCTCAAAGCGGCATCGGGAC
GCGGCAAAGGAGAGCGGGCGCTGGCCTCGCGTCCTGCCACGGGACGCCCCTGCAAATTGACAGCGACCCAGCAAGCTCAG
GTCTTTCGCTGGATCAACGGCAAGGACCCCAGGCAGTACGGGCTGGACTTCGGATTGTGGACACGCCAGATCGCAGCCAC
CCTGATCGAGAAAAAGTTTGGTCTGAAGCTGGGCGTCACGGCCGTCGGCAGAATGCTGGCCCGTCTGGGCTTGAGCCCGC
AAAAGCCACTGCAGCGTGCCTACCAGCGCGACCCGCAAGCCATCGAGCGCTGGCAGCGCGAAACCTATCCGGGCATTGCG
GCGGCTGCGCGGCAAAGCGGCGCAGACATCTATTTCTGGGACGAGTCGGGCTTTCGTGCCGACACAGTGCATGGCAAGAC
TTGGGGCGTCAAGGGCAAGACGCCCGTCATCGAGCGTCCCGGCCAGCGCCAGTCGATCTCGGCGGCCTCGGCGGTCAATG
CCAAGGGGGGCTTCTGGTTTGCCACCTACCAAGGGGGTCTGACGGCAGAGCTGTTTGTAGTGTGGTGGTCAAGTTATTTC
GGACACATCGATAGGTTGTTGAGTTGCCGATTTTTGCTCGAAGGCAATGGGTGA

Upstream 100 bases:

>100_bases
TGGCTCGACTTTACCCGCCGTGAAAATTGAACTTACTCACCAGTCCGAAATTAGAGCGACAAGTTGGGAACTTGAGCGAG
AGGTGATAGTCTGATGGTGC

Downstream 100 bases:

>100_bases
CAAATTTCCCAGTTTTGAATGCAGTCGTTCACAGTTGTAGAAGCCGACGATGTAGTCAGCAACGTCGTTTGTGGCCTCAC
TGTGATTTGCGTAGTCTTTT

Product: transposase

Products: NA

Alternate protein names: Transposase And Inactivated Derivatives; ISXo7 Transposase; Helix-Turn-Helix Type; ISXoo2 Transposase; Transposase And Inactivated Derivatives-Like Protein; Transposase ISC; Transposase IS; Transposase Of IS; Cation Diffusion Facilitator Family Transporter; Isxo7 Transposase; Transposase Fragmentary Gene

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MKRDGRTLDHATLEEFRLLALRRVREGEKPSAVVRSLGMNRTSIYRWLKAASGRGKGERALASRPATGRPCKLTATQQAQ
VFRWINGKDPRQYGLDFGLWTRQIAATLIEKKFGLKLGVTAVGRMLARLGLSPQKPLQRAYQRDPQAIERWQRETYPGIA
AAARQSGADIYFWDESGFRADTVHGKTWGVKGKTPVIERPGQRQSISAASAVNAKGGFWFATYQGGLTAELFVVWWSSYF
GHIDRLLSCRFLLEGNG

Sequences:

>Translated_257_residues
MKRDGRTLDHATLEEFRLLALRRVREGEKPSAVVRSLGMNRTSIYRWLKAASGRGKGERALASRPATGRPCKLTATQQAQ
VFRWINGKDPRQYGLDFGLWTRQIAATLIEKKFGLKLGVTAVGRMLARLGLSPQKPLQRAYQRDPQAIERWQRETYPGIA
AAARQSGADIYFWDESGFRADTVHGKTWGVKGKTPVIERPGQRQSISAASAVNAKGGFWFATYQGGLTAELFVVWWSSYF
GHIDRLLSCRFLLEGNG
>Mature_257_residues
MKRDGRTLDHATLEEFRLLALRRVREGEKPSAVVRSLGMNRTSIYRWLKAASGRGKGERALASRPATGRPCKLTATQQAQ
VFRWINGKDPRQYGLDFGLWTRQIAATLIEKKFGLKLGVTAVGRMLARLGLSPQKPLQRAYQRDPQAIERWQRETYPGIA
AAARQSGADIYFWDESGFRADTVHGKTWGVKGKTPVIERPGQRQSISAASAVNAKGGFWFATYQGGLTAELFVVWWSSYF
GHIDRLLSCRFLLEGNG

Specific function: Unknown

COG id: COG3415

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28801; Mature: 28801

Theoretical pI: Translated: 11.22; Mature: 11.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRDGRTLDHATLEEFRLLALRRVREGEKPSAVVRSLGMNRTSIYRWLKAASGRGKGERA
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHH
LASRPATGRPCKLTATQQAQVFRWINGKDPRQYGLDFGLWTRQIAATLIEKKFGLKLGVT
HHCCCCCCCCEEEEEHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCEECHH
AVGRMLARLGLSPQKPLQRAYQRDPQAIERWQRETYPGIAAAARQSGADIYFWDESGFRA
HHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHCCCCEEEEECCCCCEE
DTVHGKTWGVKGKTPVIERPGQRQSISAASAVNAKGGFWFATYQGGLTAELFVVWWSSYF
ECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHH
GHIDRLLSCRFLLEGNG
HHHHHHHHHHHEEECCC
>Mature Secondary Structure
MKRDGRTLDHATLEEFRLLALRRVREGEKPSAVVRSLGMNRTSIYRWLKAASGRGKGERA
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHH
LASRPATGRPCKLTATQQAQVFRWINGKDPRQYGLDFGLWTRQIAATLIEKKFGLKLGVT
HHCCCCCCCCEEEEEHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCEECHH
AVGRMLARLGLSPQKPLQRAYQRDPQAIERWQRETYPGIAAAARQSGADIYFWDESGFRA
HHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHCCCCEEEEECCCCCEE
DTVHGKTWGVKGKTPVIERPGQRQSISAASAVNAKGGFWFATYQGGLTAELFVVWWSSYF
ECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHH
GHIDRLLSCRFLLEGNG
HHHHHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA