| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is mviN [H]
Identifier: 91789423
GI number: 91789423
Start: 3768968
End: 3770533
Strand: Reverse
Name: mviN [H]
Synonym: Bpro_3569
Alternate gene names: 91789423
Gene position: 3770533-3768968 (Counterclockwise)
Preceding gene: 91789425
Following gene: 91789422
Centisome position: 72.51
GC content: 64.5
Gene sequence:
>1566_bases GTGTCACTTTTCAAAGCCGCCTCCACCGTTTCCCTGCTCACCCTGGTTTCCCGGATCACCGGTTTGGTGCGTGAACTGCT GATTGCCTCAACTTTTGGCGCCAGCGCCATGACCGACGCCTTCAACGTGGCGTTTCGCATCCCCAACCTGTTTCGCCGCC TGTTTGCCGAGGGCGCCTTCAGCCAGGCCTTTGTGCCGGTGCTGGCGGCCAGCAAGGCCAAAAACGGCGACGCCGAGACC AGGCTGTTGATCGACCGGGTTGCGACGCTGTTGACTTGGGCGCTGCTGCTGACCTGCGTGATCGGCGTGGCGGCGGCGCC GGTGCTGGTCTGGGCCATGGCCAGCGGCCTGAAGCAGGAACCGCGCGGCTTTGAAGCTGCTGTCTTCATGACCCGCTGGA TGTTCCCCTACATCGCCTTCATGTCGCTGGTGGCGCTGTCGTCCGGCGTACTCAATACCTGGCGGCGTTTTGCGGTGCCG GCGGCGACGCCGGTGCTGTTGAACCTGGCCATGATTGCGGCCGCCTGGCTGGGCGCGCCCTGGTTCCGGGCACAGGGCAT CGAGCCGGTCTACGCCCTGGGCGCCGGCGTGATGCTTGGTGGGGTTTTGCAGTTGGCAGTGCAGGTGCCGGCCTTGCTGC GCCTGGGCCTGCTGCCAAAAATTGGCTTCAATTGGGCGCTTATCCAGGCTGCCTGGGCGGACACGGCGACAAAAAACATC GCCACACTGATGGTTCCCGCCTTGCTGGGTGTCAGCGTGGCGCAGATTTCCCTGCTGATCAACACCCAGATTGCCTCGCA CCTGACGCCTGGCAGCGTGAGCTGGCTGACCTATGCCGACCGGCTGATGGAGTTCCCGACGGCCATGCTGGGCGTGGCCA TCGGTGTGGTGCTGATGCCACAGCTGGCGGCCGCCAAGGCAGCCGGCGACGCTGCCAAATACTCGGCCATGCTGGACTGG GGCCTGCGCATCGTGGTCGTGCTTGCCGTGCCTTGCGCCGTAGCCCTGCTGACCTTTGCACAGCCGCTGGTCGCGACGCT CTACCACTACGGCGCTTTTACCGACCGGGACGTGCAGCAGACCACGATTGCGCTGATGGGCTACGGCGCAGGCCTGCTGG GCCTGGTGGCCATCAAGGTGCTGGCGCCGGGTTTTTATGCCAGCCAGGACATCCGCACGCCTGTGCGCATTGCGGTGGTG GTGCTGGTCATCACGCAATTGCTCAATGTGGCGCTGGTGCCTCTTTTGCAGCACGCCGGGCTGGCGCTCGCCATTGGCAT CGGGGCGCTGATCAATGCGCTGTGGCTGCTGGTGGGCCTGATGCGGCGCGGCAGTTACACGCCTGCGCCTGGCTGGGGTG CTTTCGCCTGCCAGGTCCTCGCCGCCAGCGCCTTGCTGGCGGTGTTTTTGCTGTGGGCCGCAGGCCGGGTGAGCTGGACC GGCCTCAAAAGCGCCTATTTGGAACGAATTTGGTTGCTAGCCCTTGTTTTGTTGGTGTCGGCAGCTATTTATTTTGTAGC GCTCTGGCTCTCCGGGCTGAAGTTGCGCCAGCTGGTCAGGCGCTGA
Upstream 100 bases:
>100_bases GAGCCGCGGAACCGGCTCTGCCGGGCCGCAGGCGGGCGGCCCCCTCGGGGGGCAGGGAGCTACACGCAGTGAGCGACCGT GGGGGCTATAAACTCCACGG
Downstream 100 bases:
>100_bases TCCGGCCGGCGCGGTTGGTCCAGCCTGCCTTTGGTCGGCTGGGACGAACCGGGGGTATTCCTGATCCCCACAGGGGTGTC AGTTTGTGAGAAAGTAGTGC
Product: integral membrane protein MviN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 521; Mature: 520
Protein sequence:
>521_residues MSLFKAASTVSLLTLVSRITGLVRELLIASTFGASAMTDAFNVAFRIPNLFRRLFAEGAFSQAFVPVLAASKAKNGDAET RLLIDRVATLLTWALLLTCVIGVAAAPVLVWAMASGLKQEPRGFEAAVFMTRWMFPYIAFMSLVALSSGVLNTWRRFAVP AATPVLLNLAMIAAAWLGAPWFRAQGIEPVYALGAGVMLGGVLQLAVQVPALLRLGLLPKIGFNWALIQAAWADTATKNI ATLMVPALLGVSVAQISLLINTQIASHLTPGSVSWLTYADRLMEFPTAMLGVAIGVVLMPQLAAAKAAGDAAKYSAMLDW GLRIVVVLAVPCAVALLTFAQPLVATLYHYGAFTDRDVQQTTIALMGYGAGLLGLVAIKVLAPGFYASQDIRTPVRIAVV VLVITQLLNVALVPLLQHAGLALAIGIGALINALWLLVGLMRRGSYTPAPGWGAFACQVLAASALLAVFLLWAAGRVSWT GLKSAYLERIWLLALVLLVSAAIYFVALWLSGLKLRQLVRR
Sequences:
>Translated_521_residues MSLFKAASTVSLLTLVSRITGLVRELLIASTFGASAMTDAFNVAFRIPNLFRRLFAEGAFSQAFVPVLAASKAKNGDAET RLLIDRVATLLTWALLLTCVIGVAAAPVLVWAMASGLKQEPRGFEAAVFMTRWMFPYIAFMSLVALSSGVLNTWRRFAVP AATPVLLNLAMIAAAWLGAPWFRAQGIEPVYALGAGVMLGGVLQLAVQVPALLRLGLLPKIGFNWALIQAAWADTATKNI ATLMVPALLGVSVAQISLLINTQIASHLTPGSVSWLTYADRLMEFPTAMLGVAIGVVLMPQLAAAKAAGDAAKYSAMLDW GLRIVVVLAVPCAVALLTFAQPLVATLYHYGAFTDRDVQQTTIALMGYGAGLLGLVAIKVLAPGFYASQDIRTPVRIAVV VLVITQLLNVALVPLLQHAGLALAIGIGALINALWLLVGLMRRGSYTPAPGWGAFACQVLAASALLAVFLLWAAGRVSWT GLKSAYLERIWLLALVLLVSAAIYFVALWLSGLKLRQLVRR >Mature_520_residues SLFKAASTVSLLTLVSRITGLVRELLIASTFGASAMTDAFNVAFRIPNLFRRLFAEGAFSQAFVPVLAASKAKNGDAETR LLIDRVATLLTWALLLTCVIGVAAAPVLVWAMASGLKQEPRGFEAAVFMTRWMFPYIAFMSLVALSSGVLNTWRRFAVPA ATPVLLNLAMIAAAWLGAPWFRAQGIEPVYALGAGVMLGGVLQLAVQVPALLRLGLLPKIGFNWALIQAAWADTATKNIA TLMVPALLGVSVAQISLLINTQIASHLTPGSVSWLTYADRLMEFPTAMLGVAIGVVLMPQLAAAKAAGDAAKYSAMLDWG LRIVVVLAVPCAVALLTFAQPLVATLYHYGAFTDRDVQQTTIALMGYGAGLLGLVAIKVLAPGFYASQDIRTPVRIAVVV LVITQLLNVALVPLLQHAGLALAIGIGALINALWLLVGLMRRGSYTPAPGWGAFACQVLAASALLAVFLLWAAGRVSWTG LKSAYLERIWLLALVLLVSAAIYFVALWLSGLKLRQLVRR
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=531, Percent_Identity=44.6327683615819, Blast_Score=425, Evalue=1e-120,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 55415; Mature: 55284
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFKAASTVSLLTLVSRITGLVRELLIASTFGASAMTDAFNVAFRIPNLFRRLFAEGAF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCH SQAFVPVLAASKAKNGDAETRLLIDRVATLLTWALLLTCVIGVAAAPVLVWAMASGLKQE HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PRGFEAAVFMTRWMFPYIAFMSLVALSSGVLNTWRRFAVPAATPVLLNLAMIAAAWLGAP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC WFRAQGIEPVYALGAGVMLGGVLQLAVQVPALLRLGLLPKIGFNWALIQAAWADTATKNI HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH ATLMVPALLGVSVAQISLLINTQIASHLTPGSVSWLTYADRLMEFPTAMLGVAIGVVLMP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLAAAKAAGDAAKYSAMLDWGLRIVVVLAVPCAVALLTFAQPLVATLYHYGAFTDRDVQQ HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH TTIALMGYGAGLLGLVAIKVLAPGFYASQDIRTPVRIAVVVLVITQLLNVALVPLLQHAG HHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC LALAIGIGALINALWLLVGLMRRGSYTPAPGWGAFACQVLAASALLAVFLLWAAGRVSWT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH GLKSAYLERIWLLALVLLVSAAIYFVALWLSGLKLRQLVRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLFKAASTVSLLTLVSRITGLVRELLIASTFGASAMTDAFNVAFRIPNLFRRLFAEGAF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCH SQAFVPVLAASKAKNGDAETRLLIDRVATLLTWALLLTCVIGVAAAPVLVWAMASGLKQE HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PRGFEAAVFMTRWMFPYIAFMSLVALSSGVLNTWRRFAVPAATPVLLNLAMIAAAWLGAP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC WFRAQGIEPVYALGAGVMLGGVLQLAVQVPALLRLGLLPKIGFNWALIQAAWADTATKNI HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH ATLMVPALLGVSVAQISLLINTQIASHLTPGSVSWLTYADRLMEFPTAMLGVAIGVVLMP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLAAAKAAGDAAKYSAMLDWGLRIVVVLAVPCAVALLTFAQPLVATLYHYGAFTDRDVQQ HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH TTIALMGYGAGLLGLVAIKVLAPGFYASQDIRTPVRIAVVVLVITQLLNVALVPLLQHAG HHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC LALAIGIGALINALWLLVGLMRRGSYTPAPGWGAFACQVLAASALLAVFLLWAAGRVSWT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH GLKSAYLERIWLLALVLLVSAAIYFVALWLSGLKLRQLVRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8200538; 11677609 [H]