| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is rcp1 [H]
Identifier: 91789367
GI number: 91789367
Start: 3714770
End: 3715222
Strand: Direct
Name: rcp1 [H]
Synonym: Bpro_3513
Alternate gene names: 91789367
Gene position: 3714770-3715222 (Clockwise)
Preceding gene: 91789366
Following gene: 91789369
Centisome position: 71.43
GC content: 63.13
Gene sequence:
>453_bases ATGAACATTTCCGCGCCTGACATCCTGCTGGTTGAAGACAGCCCCACTTCAGCCGAACTATTCGTGTTCGCCCTCGAGGC CAACCAGTCGGCCGCCACCATCCAGGTCGTGCGCGACGGTGTGCAGGCCCTGGACTTCCTGCTGGGTGGCGCCACCCCAT CCGGGAGCGCTGGCAACGCCCTGCCTCGTCTGGTGTTGCTGGATATTCACATGCCGAGGCTTAACGGGTTCCAGGTGCTG GAGCGCCTGCGTGCCGATGAGCGGACGCGGTTTCTTCCGGTGGTGGTCCTTAGTTCCTCCGACAAGGAGTCGGACAGGCG CGAGGCCTATCGGCTTGGTGCCAATGGCTGCATCTCCAAGCCCATGGGGTTCAAGGACTCTTGCGAAGCTATCGCCCAGC TCGAACGCGAGTGGCTGGGGGCGGTCGTGCCTGCGCAGAATCCACCGGAATGA
Upstream 100 bases:
>100_bases GAATCTGTGCGCGACCCTGGCGCAGTTCGAACGCGACTGGCTGAGCGCCGACCTTGCTCCACGGCATCCGGCAGGATGAC TGTGCAATTGGGCCCTCATC
Downstream 100 bases:
>100_bases CTATGCAATTGCTCTCCCCATCTGCGACATGATCACGAAAATTTCACCTAGGCAGCCTGCCGCTGCAGGATGCTGTCGCG CAGCGCGTGCAGAAAGCCCT
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MNISAPDILLVEDSPTSAELFVFALEANQSAATIQVVRDGVQALDFLLGGATPSGSAGNALPRLVLLDIHMPRLNGFQVL ERLRADERTRFLPVVVLSSSDKESDRREAYRLGANGCISKPMGFKDSCEAIAQLEREWLGAVVPAQNPPE
Sequences:
>Translated_150_residues MNISAPDILLVEDSPTSAELFVFALEANQSAATIQVVRDGVQALDFLLGGATPSGSAGNALPRLVLLDIHMPRLNGFQVL ERLRADERTRFLPVVVLSSSDKESDRREAYRLGANGCISKPMGFKDSCEAIAQLEREWLGAVVPAQNPPE >Mature_150_residues MNISAPDILLVEDSPTSAELFVFALEANQSAATIQVVRDGVQALDFLLGGATPSGSAGNALPRLVLLDIHMPRLNGFQVL ERLRADERTRFLPVVVLSSSDKESDRREAYRLGANGCISKPMGFKDSCEAIAQLEREWLGAVVPAQNPPE
Specific function: Forms a two-component system with cph1 in which it acts as receiver substrate [H]
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 16218; Mature: 16218
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNISAPDILLVEDSPTSAELFVFALEANQSAATIQVVRDGVQALDFLLGGATPSGSAGNA CCCCCCCEEEEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC LPRLVLLDIHMPRLNGFQVLERLRADERTRFLPVVVLSSSDKESDRREAYRLGANGCISK CCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCCCCCC PMGFKDSCEAIAQLEREWLGAVVPAQNPPE CCCCCHHHHHHHHHHHHHHCEECCCCCCCC >Mature Secondary Structure MNISAPDILLVEDSPTSAELFVFALEANQSAATIQVVRDGVQALDFLLGGATPSGSAGNA CCCCCCCEEEEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC LPRLVLLDIHMPRLNGFQVLERLRADERTRFLPVVVLSSSDKESDRREAYRLGANGCISK CCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCCCCCC PMGFKDSCEAIAQLEREWLGAVVPAQNPPE CCCCCHHHHHHHHHHHHHHCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231; 9278513 [H]