| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789299
Identifier: 91789299
GI number: 91789299
Start: 3646716
End: 3647333
Strand: Direct
Name: 91789299
Synonym: Bpro_3444
Alternate gene names: NA
Gene position: 3646716-3647333 (Clockwise)
Preceding gene: 91789296
Following gene: 91789300
Centisome position: 70.13
GC content: 58.09
Gene sequence:
>618_bases ATGAACAAAGCGACCACTTATCCGGTTTCCGCCCGCGGCCCGGCCGACCATGACGTGCGAGATCAGATCGTTACCGCGGC CACCGAGCACTTCAGCCGCTACGGTTACGAGAAAACGACCGTCTCCGACCTCGCCAAAGCCATCGGGTTTTCCAAGGCTT ACATCTACAAGTTCTTTGAGTCCAAGCAGGCCATCGGCGAGATGATCTGCGCAAACTGCCTGCGCGAGATTGAGGCCGAG GTCAGTGCGGCTATTGCAGGGGCCGACATGCCGCCAGAGAAATTGCGGCGGATGTTTAAAGCCATGACCGAGGCGAGCCT TCGATTGTTTTTTCAGGACCGCAAGCTGTACGAGATTGCCGCCTCGGCCGCTACGGAGCGCTGGCAGGCGGTTCATGCCT ACGAAGAACACATCCAGAAGCTGCTTCGGGACGTCTTGCAGGAAGGCCGGCAAACCGGGGACTTTGAGCGCAAGACACCC TTGGACGAGACGGCGTTGGCCATCTATCTGGTCATGCGCCCCTACCTCAACCCTTTGCTCTTGCAACATAGCTTTGACTA CAACAAAGAGGCGCCGGCGCATTTGTCGAGCCTGGTGCTTCGCAGCCTGTCACCATAA
Upstream 100 bases:
>100_bases GCAGCATAGACTTGTTCCGAATCAGGTAGTCGATGAAGTGACTATAATACAATATGGTCACTCGTTGTTCATTTCTTTAG ATGCAGGTAAGCTACAGACC
Downstream 100 bases:
>100_bases ATAAAACTGTGACTATTGACTAATTTGGTCACAAGTACCATAATGAAAGTCCAATCATTTCGTCAATGGGACTTTCATGC TCAGGCGTTACTTCGCTACA
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator Protein TetR Family; Transcriptional Regulator Protein; TetR/AcrR Family Transcriptional Regulator; Transcriptional Activator; TetR-Family Transcriptional Regulatory Protein; HTH-Type Transcriptional Regulator Luxr
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MNKATTYPVSARGPADHDVRDQIVTAATEHFSRYGYEKTTVSDLAKAIGFSKAYIYKFFESKQAIGEMICANCLREIEAE VSAAIAGADMPPEKLRRMFKAMTEASLRLFFQDRKLYEIAASAATERWQAVHAYEEHIQKLLRDVLQEGRQTGDFERKTP LDETALAIYLVMRPYLNPLLLQHSFDYNKEAPAHLSSLVLRSLSP
Sequences:
>Translated_205_residues MNKATTYPVSARGPADHDVRDQIVTAATEHFSRYGYEKTTVSDLAKAIGFSKAYIYKFFESKQAIGEMICANCLREIEAE VSAAIAGADMPPEKLRRMFKAMTEASLRLFFQDRKLYEIAASAATERWQAVHAYEEHIQKLLRDVLQEGRQTGDFERKTP LDETALAIYLVMRPYLNPLLLQHSFDYNKEAPAHLSSLVLRSLSP >Mature_205_residues MNKATTYPVSARGPADHDVRDQIVTAATEHFSRYGYEKTTVSDLAKAIGFSKAYIYKFFESKQAIGEMICANCLREIEAE VSAAIAGADMPPEKLRRMFKAMTEASLRLFFQDRKLYEIAASAATERWQAVHAYEEHIQKLLRDVLQEGRQTGDFERKTP LDETALAIYLVMRPYLNPLLLQHSFDYNKEAPAHLSSLVLRSLSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23253; Mature: 23253
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKATTYPVSARGPADHDVRDQIVTAATEHFSRYGYEKTTVSDLAKAIGFSKAYIYKFFE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHH SKQAIGEMICANCLREIEAEVSAAIAGADMPPEKLRRMFKAMTEASLRLFFQDRKLYEIA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASAATERWQAVHAYEEHIQKLLRDVLQEGRQTGDFERKTPLDETALAIYLVMRPYLNPLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LQHSFDYNKEAPAHLSSLVLRSLSP HHHCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MNKATTYPVSARGPADHDVRDQIVTAATEHFSRYGYEKTTVSDLAKAIGFSKAYIYKFFE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHH SKQAIGEMICANCLREIEAEVSAAIAGADMPPEKLRRMFKAMTEASLRLFFQDRKLYEIA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASAATERWQAVHAYEEHIQKLLRDVLQEGRQTGDFERKTPLDETALAIYLVMRPYLNPLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LQHSFDYNKEAPAHLSSLVLRSLSP HHHCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA