The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91789295

Identifier: 91789295

GI number: 91789295

Start: 3640682

End: 3641674

Strand: Direct

Name: 91789295

Synonym: Bpro_3440

Alternate gene names: NA

Gene position: 3640682-3641674 (Clockwise)

Preceding gene: 91789293

Following gene: 91789296

Centisome position: 70.01

GC content: 63.75

Gene sequence:

>993_bases
ATGATGAAGATGCGCCGAACGACGCTTGCGGTCCTCTGCTGTGTGGCTATCGCGCCCCTGGCAAAACCGGCCCTTGCTGC
AGATGTTTATCCCGACAAGACCATCACGATCGTCGTGCCGTCCGTTGCCGGCGGCGCAGCCGATGCGGTCGGCCGTGCAG
TGGCCCAGGGCCTTGGCAAGCAGCTCAATGCCTCGGTGATCGTTGACAACAAGCCGGGTGCCGGAACCACGCTGGGCACA
CAGCAGGTGATCCGCATGCCGGCCGACGGGTACACGCTATTGCTGGGCCTGGATGCCGCGCTGACCACCGCGCCCTTCAT
GCTGGCGAAGCTGCCCTATCAACCCAAAACAGACCTGACGCCGATTGCCACGCTGGCCACACTGCAATACCTGCTGGTGG
CGTCGCCTGCCGCGCCCTTTCATTCGGTGACTGAACTGGTGGAGCGCGCACGCGCAAACCCCGGCACCATCACCTACGCC
AGCGGCGGCGAAGGCTCCGTGCACCACCTGGCAATGGAGGCTTTCCAGAAAGAAGCCGGCATCCGGCTCAAGCATGTGCC
ATACAAAGCCGCCCCGCAGGGTTTCCTGGATGTCATGGGCTCACACGTCGATGTGATGTTCATCGCGTCGGGCACGGCGG
TGTCACCCATCAAGGCGCGCAAGGTGCAGGGCTTGGGCCGCACCGGCGTAGCGCCCATCAGCGACCTTCCGGCCATGGCC
GCGCTGAGGGACATGCCCGAGTCCAAAGGCTATGTCTTCGAGAGCTGGTTTGGCCTGCTGGCGCGCGCCGGCACGCCCGC
ATCGATGGTCGGCCGCGTCAGCACGGCACTGGCCGGCTTCATGAAAAGCCCCGAAGCCGAAGCACAGATGCAGGCTTTGG
GCGTCACCCTGACGTTTGAAGATCCATCCACCCTTGCCAAACGCATCGATGAGGACACCAAACGTTATGCGCCCGTGGTG
GCCAAGCTGAAGGAACAAAGCGCCAAGCCATGA

Upstream 100 bases:

>100_bases
TCATTAGACAGGCATGCAGGCGTTCCCTACCATGGGGTTTTCACCCAAAAGACCGGCCCATACGCTACAGGCGTGTGGGC
CATAAAAAGGAGACTTGACC

Downstream 100 bases:

>100_bases
AGCGACCCAACATACTGCTCATCACCACCGACCAGCACCGGGGTGACTGCCTGGGCTTTGCAGGCCGCAAGGTCAAGACC
CCGCACATCGACGAAATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MMKMRRTTLAVLCCVAIAPLAKPALAADVYPDKTITIVVPSVAGGAADAVGRAVAQGLGKQLNASVIVDNKPGAGTTLGT
QQVIRMPADGYTLLLGLDAALTTAPFMLAKLPYQPKTDLTPIATLATLQYLLVASPAAPFHSVTELVERARANPGTITYA
SGGEGSVHHLAMEAFQKEAGIRLKHVPYKAAPQGFLDVMGSHVDVMFIASGTAVSPIKARKVQGLGRTGVAPISDLPAMA
ALRDMPESKGYVFESWFGLLARAGTPASMVGRVSTALAGFMKSPEAEAQMQALGVTLTFEDPSTLAKRIDEDTKRYAPVV
AKLKEQSAKP

Sequences:

>Translated_330_residues
MMKMRRTTLAVLCCVAIAPLAKPALAADVYPDKTITIVVPSVAGGAADAVGRAVAQGLGKQLNASVIVDNKPGAGTTLGT
QQVIRMPADGYTLLLGLDAALTTAPFMLAKLPYQPKTDLTPIATLATLQYLLVASPAAPFHSVTELVERARANPGTITYA
SGGEGSVHHLAMEAFQKEAGIRLKHVPYKAAPQGFLDVMGSHVDVMFIASGTAVSPIKARKVQGLGRTGVAPISDLPAMA
ALRDMPESKGYVFESWFGLLARAGTPASMVGRVSTALAGFMKSPEAEAQMQALGVTLTFEDPSTLAKRIDEDTKRYAPVV
AKLKEQSAKP
>Mature_330_residues
MMKMRRTTLAVLCCVAIAPLAKPALAADVYPDKTITIVVPSVAGGAADAVGRAVAQGLGKQLNASVIVDNKPGAGTTLGT
QQVIRMPADGYTLLLGLDAALTTAPFMLAKLPYQPKTDLTPIATLATLQYLLVASPAAPFHSVTELVERARANPGTITYA
SGGEGSVHHLAMEAFQKEAGIRLKHVPYKAAPQGFLDVMGSHVDVMFIASGTAVSPIKARKVQGLGRTGVAPISDLPAMA
ALRDMPESKGYVFESWFGLLARAGTPASMVGRVSTALAGFMKSPEAEAQMQALGVTLTFEDPSTLAKRIDEDTKRYAPVV
AKLKEQSAKP

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34538; Mature: 34538

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKMRRTTLAVLCCVAIAPLAKPALAADVYPDKTITIVVPSVAGGAADAVGRAVAQGLGK
CCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCH
QLNASVIVDNKPGAGTTLGTQQVIRMPADGYTLLLGLDAALTTAPFMLAKLPYQPKTDLT
HCCCEEEEECCCCCCCCCCHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCC
PIATLATLQYLLVASPAAPFHSVTELVERARANPGTITYASGGEGSVHHLAMEAFQKEAG
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHC
IRLKHVPYKAAPQGFLDVMGSHVDVMFIASGTAVSPIKARKVQGLGRTGVAPISDLPAMA
CEEEECCCCCCCHHHHHHHCCCEEEEEEECCCCCCCHHHHHHCCCCCCCCCCCHHHHHHH
ALRDMPESKGYVFESWFGLLARAGTPASMVGRVSTALAGFMKSPEAEAQMQALGVTLTFE
HHHHCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEEEC
DPSTLAKRIDEDTKRYAPVVAKLKEQSAKP
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMKMRRTTLAVLCCVAIAPLAKPALAADVYPDKTITIVVPSVAGGAADAVGRAVAQGLGK
CCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCH
QLNASVIVDNKPGAGTTLGTQQVIRMPADGYTLLLGLDAALTTAPFMLAKLPYQPKTDLT
HCCCEEEEECCCCCCCCCCHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCC
PIATLATLQYLLVASPAAPFHSVTELVERARANPGTITYASGGEGSVHHLAMEAFQKEAG
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHC
IRLKHVPYKAAPQGFLDVMGSHVDVMFIASGTAVSPIKARKVQGLGRTGVAPISDLPAMA
CEEEECCCCCCCHHHHHHHCCCEEEEEEECCCCCCCHHHHHHCCCCCCCCCCCHHHHHHH
ALRDMPESKGYVFESWFGLLARAGTPASMVGRVSTALAGFMKSPEAEAQMQALGVTLTFE
HHHHCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEEEC
DPSTLAKRIDEDTKRYAPVVAKLKEQSAKP
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]