| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is egl [H]
Identifier: 91789272
GI number: 91789272
Start: 3612204
End: 3614699
Strand: Reverse
Name: egl [H]
Synonym: Bpro_3417
Alternate gene names: 91789272
Gene position: 3614699-3612204 (Counterclockwise)
Preceding gene: 91789280
Following gene: 91789271
Centisome position: 69.51
GC content: 65.02
Gene sequence:
>2496_bases ATGGGCCCGGCTTTCCCGCCAGCCCAGGAAAAAACAACCTCCATGCAAAGACGTGAATTTTCGCAAGCCGCCGCCGCGGC GGCCACGCTGGCCACCTTTGGCTCCCTTGTGTCGGCCGCGCGGGCAGCACCGGCGGGCCCTCTGCCGGACAAGGGGGCGG CGCAGCCCGACGGCAGAAACACCGCCCGGGTGGCGATGGGCACCAATCTTTCGGGCATGGAATGGGCCAAGCCCGGGCTG CGCTATGGAATGAGCAGTGCGCCCAATCTGCACTTCACCGTCCCGCGCAAGGTCGATGCGGCCTACCTGGCGGCCTGTGG CTACACGAAGAACCGCCTGCCCATCCAGTGGGAGCTTTTGCAGCCGATGCTGCACGACACCCCGGCCAACGCAGCGGCGA AGGCGGCGATTGGCAACCCGGGCGCGTTTCATCCCGCGTACGAGGCCTACATCACGGGCGTGCTCGATGCCCACGCGGCG GTCGGCATGAAATGCATCATTGACAACCACAACTACGGCCGTTACCAGGACTTCCGGTTTCAGCCCGACGGGGCCGTCAT CGGCCTGACCACGCCGCCCAATCCCTTGCTGCGACCCTATACCAGCGATCGTACGCAGGTGCAGGTGCGGATTTTTTCGC TCGCGCCCGGTGCCACGCTGACCCAGGCCCACTTCGTCGATTTCTGGTCGCGTGCCGCGCGCAGGTGGAAGGACCACCCC GGCTTTGGCGGGTACGGCCTGATGAACGAGCCTCACGACATGCCCAAACCCGGTGGCGTGATTGCGTCGAATGAAGAGGC CGTGAAGGCGGCCGAAGACCTCACCATCTGGCCGGCCTATGCGCAGGCGGCTATCGATGCGATCCGCGCCATCGACACGG CCAATCCCATTTACGTGGCGGGAAACCAGTACAGCTCGGCCATGGTCATCGGAACCAAGAACCCCGGCTTTCCATTGCGT GGCAGCAACCTGATTTACGAAGTTCACATGTACCTGGATGCGTTCAGCAATGGCGCTTCGTTTGACTATGACGCCGAAGT GGCGAAGAACTTCAGCGCGGGTTTCGGCGCCGGTGCCATCCACCCCGGCACCGGCCTGGAGCGGCTTAAAAAGGCCACCG GCTGGGCCAAGGCCGCGGGTGTCCGGCTGGCGCTGACCGAGGTCGGGATGCCGATAGACGACCCGCGCTGGGAGCCGATG TTCCTGCGCGCTGTCACCCATGCCTATGAGTCAGGTTGCGAGATATACAGCTGGATGGGGGGTAATCATTGGCCGATCCG CAACTACGCCATCAACCATGTGCCGGGCTGGCACCAGAACAAGACGCTGGAGCCGCTGGTGTCCGGCGTGCTCAAGGCCT CTGCCGGCATCGAGCAGGCCCTGCTCTTCGACGACGGCCTGGGCTATGCGCTGGCCGGCGCTCCCCTCACGATCACCGTC TATGCCCGGGGCAACCTCGGCCGGCCTGTCTCTGTGCTGGTGACGTCGAAAGGGCGGGGGACGTTGAGCAAGTCGCGGCT GACCCTGCCGGCCGGGCCGAACGGCCAGGACAGCTTCACCTACACGCCGGCGGACAACGAGGTCGCCACACTCAGCTACA CGGGCGCCGGCCCATGGACGGGCCCGCTGCCGCCGCCGCGCAAGGTGTTCTCCCTGGCCGACCCGGCGGCCTACGCCACG ACCAGCCTGGCAGACGCGGCAATGACCATCATTGCCAAATACGGTGCCTGCAAGTGGGAGCTCGCCGACGGGCACACCGA TTACCTGTTGGGGGCACCGGCCGCGGCGGGCCAGGTGGTGCGCGCCATCTCGGACTCCGGCTATGGCTCCAGCCCGGGCA ATGCCATGGAAATGATCAACTGGACCAACAAGGACAGCAGCACCATGGGTGCGATGTCGCTGCCCGTCATGCGTGTGACG AATGGCCGGAAGAACTCGGACCATACGGCGCCCGATACCTTTGGCTTCTGGTGCAAGAAATCGGCCCCGGCAGCGGGCGT GCAGCCTCGCCCGAAGAACCGCGTGCCCTACAACATCGAGGACGCCCACTTTGCCCTGGCTTGCGTGAGCATTCCGGGGA CAAGCAACACCGGTGTGGTGTTTCAGGCCTCAAAGGCGGAGGCGCGCCACACCTCGGAGCTGGGGTTCACCAACGGCCAG CCGCGGGCCAGCTGGCTGGATGCCAAGGGCCAGACGGTGCAACTGGTCAGCGCGAACAGGTTGCCGGTCAATACGCCCGC GGTGCTGGCATTTACGTCCGCACCGGGCGCGCAGAGGCTGCGTGTCAATGCGCATGAGGTAGCGAGCCACAACACCACTT TCGCGCCCAGCGTTTATTCCCAGATGCTGATCGGCTGGGGCTACCTCGGTTACTACCCGCGTGACGGCTTCAGGGGCCAT GTGTACGCGGTGATCACCGGAAAGGGTGCACCCACGGTGGAGGAGATGGTGGTGCTTGAACGTTACCTTGGCACCACTGC AGGCCTCAATATTTAA
Upstream 100 bases:
>100_bases TGGGTTCGAAGGCGCGCTTTCATGTTTCGATATTTCCGGGTCGGAGTACTGGTCCAGACCAAGGTCTAAACCCAGGTCAT ATCCCCAAGGTCATATCCCG
Downstream 100 bases:
>100_bases GAGCAAGGGTGAGCAGGGTGCGGGCGCCAACTGGAGTCCATTCCATCCTGGCGTCGCGCGCTTTCACGGCCAAGGCCACA GGCCCTAGTGTGGTGTTGCA
Product: twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: Cellulase; Endo-1,4-beta-glucanase [H]
Number of amino acids: Translated: 831; Mature: 830
Protein sequence:
>831_residues MGPAFPPAQEKTTSMQRREFSQAAAAAATLATFGSLVSAARAAPAGPLPDKGAAQPDGRNTARVAMGTNLSGMEWAKPGL RYGMSSAPNLHFTVPRKVDAAYLAACGYTKNRLPIQWELLQPMLHDTPANAAAKAAIGNPGAFHPAYEAYITGVLDAHAA VGMKCIIDNHNYGRYQDFRFQPDGAVIGLTTPPNPLLRPYTSDRTQVQVRIFSLAPGATLTQAHFVDFWSRAARRWKDHP GFGGYGLMNEPHDMPKPGGVIASNEEAVKAAEDLTIWPAYAQAAIDAIRAIDTANPIYVAGNQYSSAMVIGTKNPGFPLR GSNLIYEVHMYLDAFSNGASFDYDAEVAKNFSAGFGAGAIHPGTGLERLKKATGWAKAAGVRLALTEVGMPIDDPRWEPM FLRAVTHAYESGCEIYSWMGGNHWPIRNYAINHVPGWHQNKTLEPLVSGVLKASAGIEQALLFDDGLGYALAGAPLTITV YARGNLGRPVSVLVTSKGRGTLSKSRLTLPAGPNGQDSFTYTPADNEVATLSYTGAGPWTGPLPPPRKVFSLADPAAYAT TSLADAAMTIIAKYGACKWELADGHTDYLLGAPAAAGQVVRAISDSGYGSSPGNAMEMINWTNKDSSTMGAMSLPVMRVT NGRKNSDHTAPDTFGFWCKKSAPAAGVQPRPKNRVPYNIEDAHFALACVSIPGTSNTGVVFQASKAEARHTSELGFTNGQ PRASWLDAKGQTVQLVSANRLPVNTPAVLAFTSAPGAQRLRVNAHEVASHNTTFAPSVYSQMLIGWGYLGYYPRDGFRGH VYAVITGKGAPTVEEMVVLERYLGTTAGLNI
Sequences:
>Translated_831_residues MGPAFPPAQEKTTSMQRREFSQAAAAAATLATFGSLVSAARAAPAGPLPDKGAAQPDGRNTARVAMGTNLSGMEWAKPGL RYGMSSAPNLHFTVPRKVDAAYLAACGYTKNRLPIQWELLQPMLHDTPANAAAKAAIGNPGAFHPAYEAYITGVLDAHAA VGMKCIIDNHNYGRYQDFRFQPDGAVIGLTTPPNPLLRPYTSDRTQVQVRIFSLAPGATLTQAHFVDFWSRAARRWKDHP GFGGYGLMNEPHDMPKPGGVIASNEEAVKAAEDLTIWPAYAQAAIDAIRAIDTANPIYVAGNQYSSAMVIGTKNPGFPLR GSNLIYEVHMYLDAFSNGASFDYDAEVAKNFSAGFGAGAIHPGTGLERLKKATGWAKAAGVRLALTEVGMPIDDPRWEPM FLRAVTHAYESGCEIYSWMGGNHWPIRNYAINHVPGWHQNKTLEPLVSGVLKASAGIEQALLFDDGLGYALAGAPLTITV YARGNLGRPVSVLVTSKGRGTLSKSRLTLPAGPNGQDSFTYTPADNEVATLSYTGAGPWTGPLPPPRKVFSLADPAAYAT TSLADAAMTIIAKYGACKWELADGHTDYLLGAPAAAGQVVRAISDSGYGSSPGNAMEMINWTNKDSSTMGAMSLPVMRVT NGRKNSDHTAPDTFGFWCKKSAPAAGVQPRPKNRVPYNIEDAHFALACVSIPGTSNTGVVFQASKAEARHTSELGFTNGQ PRASWLDAKGQTVQLVSANRLPVNTPAVLAFTSAPGAQRLRVNAHEVASHNTTFAPSVYSQMLIGWGYLGYYPRDGFRGH VYAVITGKGAPTVEEMVVLERYLGTTAGLNI >Mature_830_residues GPAFPPAQEKTTSMQRREFSQAAAAAATLATFGSLVSAARAAPAGPLPDKGAAQPDGRNTARVAMGTNLSGMEWAKPGLR YGMSSAPNLHFTVPRKVDAAYLAACGYTKNRLPIQWELLQPMLHDTPANAAAKAAIGNPGAFHPAYEAYITGVLDAHAAV GMKCIIDNHNYGRYQDFRFQPDGAVIGLTTPPNPLLRPYTSDRTQVQVRIFSLAPGATLTQAHFVDFWSRAARRWKDHPG FGGYGLMNEPHDMPKPGGVIASNEEAVKAAEDLTIWPAYAQAAIDAIRAIDTANPIYVAGNQYSSAMVIGTKNPGFPLRG SNLIYEVHMYLDAFSNGASFDYDAEVAKNFSAGFGAGAIHPGTGLERLKKATGWAKAAGVRLALTEVGMPIDDPRWEPMF LRAVTHAYESGCEIYSWMGGNHWPIRNYAINHVPGWHQNKTLEPLVSGVLKASAGIEQALLFDDGLGYALAGAPLTITVY ARGNLGRPVSVLVTSKGRGTLSKSRLTLPAGPNGQDSFTYTPADNEVATLSYTGAGPWTGPLPPPRKVFSLADPAAYATT SLADAAMTIIAKYGACKWELADGHTDYLLGAPAAAGQVVRAISDSGYGSSPGNAMEMINWTNKDSSTMGAMSLPVMRVTN GRKNSDHTAPDTFGFWCKKSAPAAGVQPRPKNRVPYNIEDAHFALACVSIPGTSNTGVVFQASKAEARHTSELGFTNGQP RASWLDAKGQTVQLVSANRLPVNTPAVLAFTSAPGAQRLRVNAHEVASHNTTFAPSVYSQMLIGWGYLGYYPRDGFRGHV YAVITGKGAPTVEEMVVLERYLGTTAGLNI
Specific function: Unknown
COG id: COG2730
COG function: function code G; Endoglucanase
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 5 (cellulase A) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001547 - InterPro: IPR018087 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00150 Cellulase [H]
EC number: =3.2.1.4 [H]
Molecular weight: Translated: 88529; Mature: 88398
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPAFPPAQEKTTSMQRREFSQAAAAAATLATFGSLVSAARAAPAGPLPDKGAAQPDGRN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC TARVAMGTNLSGMEWAKPGLRYGMSSAPNLHFTVPRKVDAAYLAACGYTKNRLPIQWELL CEEEEECCCCCCCHHCCCHHHHCCCCCCCEEEECCCCCCHHHHHHCCCCCCCCCEEHHHH QPMLHDTPANAAAKAAIGNPGAFHPAYEAYITGVLDAHAAVGMKCIIDNHNYGRYQDFRF HHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEE QPDGAVIGLTTPPNPLLRPYTSDRTQVQVRIFSLAPGATLTQAHFVDFWSRAARRWKDHP CCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC GFGGYGLMNEPHDMPKPGGVIASNEEAVKAAEDLTIWPAYAQAAIDAIRAIDTANPIYVA CCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCEEEHHHHHHHHHHHHHHCCCCCEEEE GNQYSSAMVIGTKNPGFPLRGSNLIYEVHMYLDAFSNGASFDYDAEVAKNFSAGFGAGAI CCCCCCEEEEECCCCCCCCCCCCEEEEEEEEHHHHCCCCCCCCCHHHHHCCCCCCCCCCC HPGTGLERLKKATGWAKAAGVRLALTEVGMPIDDPRWEPMFLRAVTHAYESGCEIYSWMG CCCCCHHHHHHHCCCHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECC GNHWPIRNYAINHVPGWHQNKTLEPLVSGVLKASAGIEQALLFDDGLGYALAGAPLTITV CCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCEEEEE YARGNLGRPVSVLVTSKGRGTLSKSRLTLPAGPNGQDSFTYTPADNEVATLSYTGAGPWT EECCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCEEECCCCCCEEEEEECCCCCCC GPLPPPRKVFSLADPAAYATTSLADAAMTIIAKYGACKWELADGHTDYLLGAPAAAGQVV CCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCHHHHHHH RAISDSGYGSSPGNAMEMINWTNKDSSTMGAMSLPVMRVTNGRKNSDHTAPDTFGFWCKK HHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHCCCEEEECCCCCCCCCCCCCCCCHHCCC SAPAAGVQPRPKNRVPYNIEDAHFALACVSIPGTSNTGVVFQASKAEARHTSELGFTNGQ CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCHHHHHHCCCCCCC PRASWLDAKGQTVQLVSANRLPVNTPAVLAFTSAPGAQRLRVNAHEVASHNTTFAPSVYS CCCCEECCCCCEEEEEECCCCCCCCCEEEEEECCCCCCEEEECHHHHHCCCCCCCHHHHH QMLIGWGYLGYYPRDGFRGHVYAVITGKGAPTVEEMVVLERYLGTTAGLNI HHHHHCHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure GPAFPPAQEKTTSMQRREFSQAAAAAATLATFGSLVSAARAAPAGPLPDKGAAQPDGRN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC TARVAMGTNLSGMEWAKPGLRYGMSSAPNLHFTVPRKVDAAYLAACGYTKNRLPIQWELL CEEEEECCCCCCCHHCCCHHHHCCCCCCCEEEECCCCCCHHHHHHCCCCCCCCCEEHHHH QPMLHDTPANAAAKAAIGNPGAFHPAYEAYITGVLDAHAAVGMKCIIDNHNYGRYQDFRF HHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEE QPDGAVIGLTTPPNPLLRPYTSDRTQVQVRIFSLAPGATLTQAHFVDFWSRAARRWKDHP CCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC GFGGYGLMNEPHDMPKPGGVIASNEEAVKAAEDLTIWPAYAQAAIDAIRAIDTANPIYVA CCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCEEEHHHHHHHHHHHHHHCCCCCEEEE GNQYSSAMVIGTKNPGFPLRGSNLIYEVHMYLDAFSNGASFDYDAEVAKNFSAGFGAGAI CCCCCCEEEEECCCCCCCCCCCCEEEEEEEEHHHHCCCCCCCCCHHHHHCCCCCCCCCCC HPGTGLERLKKATGWAKAAGVRLALTEVGMPIDDPRWEPMFLRAVTHAYESGCEIYSWMG CCCCCHHHHHHHCCCHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECC GNHWPIRNYAINHVPGWHQNKTLEPLVSGVLKASAGIEQALLFDDGLGYALAGAPLTITV CCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCEEEEE YARGNLGRPVSVLVTSKGRGTLSKSRLTLPAGPNGQDSFTYTPADNEVATLSYTGAGPWT EECCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCEEECCCCCCEEEEEECCCCCCC GPLPPPRKVFSLADPAAYATTSLADAAMTIIAKYGACKWELADGHTDYLLGAPAAAGQVV CCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCHHHHHHH RAISDSGYGSSPGNAMEMINWTNKDSSTMGAMSLPVMRVTNGRKNSDHTAPDTFGFWCKK HHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHCCCEEEECCCCCCCCCCCCCCCCHHCCC SAPAAGVQPRPKNRVPYNIEDAHFALACVSIPGTSNTGVVFQASKAEARHTSELGFTNGQ CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCHHHHHHCCCCCCC PRASWLDAKGQTVQLVSANRLPVNTPAVLAFTSAPGAQRLRVNAHEVASHNTTFAPSVYS CCCCEECCCCCEEEEEECCCCCCCCCEEEEEECCCCCCEEEECHHHHHCCCCCCCHHHHH QMLIGWGYLGYYPRDGFRGHVYAVITGKGAPTVEEMVVLERYLGTTAGLNI HHHHHCHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1735723; 2738021; 2195024 [H]