Click here to switch to the map view.

The map label for this gene is norR [H]

Identifier: 91789262

GI number: 91789262

Start: 3602611

End: 3604269

Strand: Reverse

Name: norR [H]

Synonym: Bpro_3407

Alternate gene names: 91789262

Gene position: 3604269-3602611 (Counterclockwise)

Preceding gene: 91789265

Following gene: 91789260

Centisome position: 69.31

GC content: 67.99

Gene sequence:

>1659_bases
ATGATTGCTCAGCCCATGCTGAAAGCCTTGGTCCCGCTGGTGGACGACCTGTCGCGCGAGATGCCCGACGGCGAGCGTTA
CCGCCGCCTGCTCGAAGCCGTGCGTGCCTTGCTGCCCTGCGACGCCACCGCGCTGCTGCGGCTCGATGGCGCTGCCCTGG
TGCCCCTGGCCGTGAACGGGTTGAGCAGCGACACCATGGGGCGGCGCTTCAAGGTCGAAGAGCACCCACGTTTCAAGCGC
CTGCTGGAGGCCGGCGGGCCGATGCGCTTTCCCGTGGATTGCGAGCTGCCCGACCCCTATGACGGTTTGGTGGAGGGGCT
GCATGGACACCTGGAGGTGCACGACTGCATGGGCTGCCCGGTGCAGGTGGGTGAAAAAAACTGGGGCGTGCTGACTATCG
ACGCGCTGAACAGCCAGCGGTTTTCCGCAGTGGACCTGGGTGACCTGCAGGCCTTTGCCAGCCTGGCGGCCGCCACCGTC
AGCGTGGTGCAGCGCATGGAACGGCTGACCCTGCGCGCGGAGGATGAGCGCCTGCGTGCCGACACCTACCGGGAGCTGGC
CGCGGAAAGCACACCACCGGCATTGATCGGCCAGAGTGCGGCGCACCAGCGGCTGCTGGAAGAAATCGCCGTGGTCGGCA
ACAGCGAACTCACCGTGCTGATAACCGGCGAAACCGGCGTCGGCAAGGAACTGGTGGCGCAGGCGCTGCATGCCGCATCG
CCCCGCGCGGCGCGTCCGCTGATCAGCCTCAACTGCGCGGCGCTGCCCGAGACGCTGGTGGAGAGCGAGCTGTTCGGCCA
TGTACGCGGCGCATTTTCAGGCGCGGTCGCCGACCGGCGTGGCAAGTTCGAGCTGGCCAATGGCGGCACGCTGTTTCTCG
ATGAAGTCGGCGAGCTGTCTCTGGCCGTGCAGGCCAAGCTGCTGCGTGTGCTGCAGAACGGGCAATTGCAGCGCCTGGGC
TCAGACCGCGAGCACCAGGTCGATGTGCGGGTGATTGCCGCCACCAACCGCGACCTGGCGCACGAGGTGCGTGCCGGCCG
TTACCGCGCCGACTTCTACCACCGGCTCAGCGTCTATCCGCTGGTCGTGCCGCCGCTGCGCGAGCGCGGGCATGACGTGC
TGCTGCTGGCGGGCTACTTCCTCGAACAAAACCGGTCGCGCCTGGGGCTGGGCAGTTTGCGGATGGACGCCGATGCACAG
GCCTCCCTGCTGGCACACGACTGGCCGGGCAATGTGCGGGAACTCGAACACCTGGTGGGGCGTAGCGCGCTGAAAGCGCT
GGCGGGTGTGCCCGGGCGGCCACGCATCCTGAGCCTGACGGCTTCACATCTTGATTTACCCGCCCCGGCCAGCTGGGGCG
CATCAGCCCCGGACGCGTCTGGCAGCAAGGACGCCGCGGTCCAGGAGGGTATGCCCGACGCGGGCGGCGCTGCGCTGCCT
GTGGATTTGCGTACCTCGATGGAATGGCACCAGCGCCAGCGCATAGCGGCCAGCCTGGCGCGGCATCACAACAACTGGGC
GTCGGCCGCGCGCGAACTGGGCCTGCACCGTGCCAATCTGGTCAGGTTGGCGAAAAGGCTGGGTCTTCGCGGGGAAGTCG
GGAGCCCGCCTGACAGGCCACGTCCGGGTGTCCAAAACCCGCCGAAACAGGGAGTCTGA

Upstream 100 bases:

>100_bases
GTGCCAGCTCGTCTACCCATATGAATCAACAACTTGGGACATTCTGGAGTCAAAAAGATGCCATGCTAAAGTAGTCAATT
GGATACTTAAAAGAATCAAT

Downstream 100 bases:

>100_bases
AAGCGGACAGCGGTTCGGCCCAGGCCCGGGCAACGTCCTCGGGTTGGTCAGACTCCTGCCGTGTGCCGTGTGCCGTGTGC
CGTGTGCCGGAGGCCCTGTT

Product: anaerobic nitric oxide reductase transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 552; Mature: 552

Protein sequence:

>552_residues
MIAQPMLKALVPLVDDLSREMPDGERYRRLLEAVRALLPCDATALLRLDGAALVPLAVNGLSSDTMGRRFKVEEHPRFKR
LLEAGGPMRFPVDCELPDPYDGLVEGLHGHLEVHDCMGCPVQVGEKNWGVLTIDALNSQRFSAVDLGDLQAFASLAAATV
SVVQRMERLTLRAEDERLRADTYRELAAESTPPALIGQSAAHQRLLEEIAVVGNSELTVLITGETGVGKELVAQALHAAS
PRAARPLISLNCAALPETLVESELFGHVRGAFSGAVADRRGKFELANGGTLFLDEVGELSLAVQAKLLRVLQNGQLQRLG
SDREHQVDVRVIAATNRDLAHEVRAGRYRADFYHRLSVYPLVVPPLRERGHDVLLLAGYFLEQNRSRLGLGSLRMDADAQ
ASLLAHDWPGNVRELEHLVGRSALKALAGVPGRPRILSLTASHLDLPAPASWGASAPDASGSKDAAVQEGMPDAGGAALP
VDLRTSMEWHQRQRIAASLARHHNNWASAARELGLHRANLVRLAKRLGLRGEVGSPPDRPRPGVQNPPKQGV

Sequences:

>Translated_552_residues
MIAQPMLKALVPLVDDLSREMPDGERYRRLLEAVRALLPCDATALLRLDGAALVPLAVNGLSSDTMGRRFKVEEHPRFKR
LLEAGGPMRFPVDCELPDPYDGLVEGLHGHLEVHDCMGCPVQVGEKNWGVLTIDALNSQRFSAVDLGDLQAFASLAAATV
SVVQRMERLTLRAEDERLRADTYRELAAESTPPALIGQSAAHQRLLEEIAVVGNSELTVLITGETGVGKELVAQALHAAS
PRAARPLISLNCAALPETLVESELFGHVRGAFSGAVADRRGKFELANGGTLFLDEVGELSLAVQAKLLRVLQNGQLQRLG
SDREHQVDVRVIAATNRDLAHEVRAGRYRADFYHRLSVYPLVVPPLRERGHDVLLLAGYFLEQNRSRLGLGSLRMDADAQ
ASLLAHDWPGNVRELEHLVGRSALKALAGVPGRPRILSLTASHLDLPAPASWGASAPDASGSKDAAVQEGMPDAGGAALP
VDLRTSMEWHQRQRIAASLARHHNNWASAARELGLHRANLVRLAKRLGLRGEVGSPPDRPRPGVQNPPKQGV
>Mature_552_residues
MIAQPMLKALVPLVDDLSREMPDGERYRRLLEAVRALLPCDATALLRLDGAALVPLAVNGLSSDTMGRRFKVEEHPRFKR
LLEAGGPMRFPVDCELPDPYDGLVEGLHGHLEVHDCMGCPVQVGEKNWGVLTIDALNSQRFSAVDLGDLQAFASLAAATV
SVVQRMERLTLRAEDERLRADTYRELAAESTPPALIGQSAAHQRLLEEIAVVGNSELTVLITGETGVGKELVAQALHAAS
PRAARPLISLNCAALPETLVESELFGHVRGAFSGAVADRRGKFELANGGTLFLDEVGELSLAVQAKLLRVLQNGQLQRLG
SDREHQVDVRVIAATNRDLAHEVRAGRYRADFYHRLSVYPLVVPPLRERGHDVLLLAGYFLEQNRSRLGLGSLRMDADAQ
ASLLAHDWPGNVRELEHLVGRSALKALAGVPGRPRILSLTASHLDLPAPASWGASAPDASGSKDAAVQEGMPDAGGAALP
VDLRTSMEWHQRQRIAASLARHHNNWASAARELGLHRANLVRLAKRLGLRGEVGSPPDRPRPGVQNPPKQGV

Specific function: Required for the expression of anaerobic nitric oxide (NO) reductase, acts as a transcriptional activator for at least the norVW operon. Activation also requires sigma-54 [H]

COG id: COG3604

COG function: function code KT; Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 sigma-54 factor interaction domain [H]

Homologues:

Organism=Escherichia coli, GI87082152, Length=533, Percent_Identity=48.0300187617261, Blast_Score=446, Evalue=1e-126,
Organism=Escherichia coli, GI1789087, Length=438, Percent_Identity=37.6712328767123, Blast_Score=248, Evalue=7e-67,
Organism=Escherichia coli, GI87082117, Length=419, Percent_Identity=38.1861575178998, Blast_Score=246, Evalue=3e-66,
Organism=Escherichia coli, GI1790437, Length=430, Percent_Identity=39.3023255813954, Blast_Score=245, Evalue=7e-66,
Organism=Escherichia coli, GI1788550, Length=230, Percent_Identity=47.8260869565217, Blast_Score=224, Evalue=1e-59,
Organism=Escherichia coli, GI1788905, Length=226, Percent_Identity=48.2300884955752, Blast_Score=222, Evalue=6e-59,
Organism=Escherichia coli, GI1790299, Length=341, Percent_Identity=40.7624633431085, Blast_Score=221, Evalue=9e-59,
Organism=Escherichia coli, GI1789233, Length=336, Percent_Identity=38.3928571428571, Blast_Score=219, Evalue=3e-58,
Organism=Escherichia coli, GI87081872, Length=333, Percent_Identity=38.7387387387387, Blast_Score=197, Evalue=2e-51,
Organism=Escherichia coli, GI1787583, Length=297, Percent_Identity=38.7205387205387, Blast_Score=191, Evalue=1e-49,
Organism=Escherichia coli, GI1786524, Length=243, Percent_Identity=43.6213991769547, Blast_Score=190, Evalue=2e-49,
Organism=Escherichia coli, GI1789828, Length=236, Percent_Identity=37.7118644067797, Blast_Score=141, Evalue=1e-34,
Organism=Escherichia coli, GI87081858, Length=215, Percent_Identity=36.7441860465116, Blast_Score=128, Evalue=1e-30,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR003018
- InterPro:   IPR009057
- InterPro:   IPR002078 [H]

Pfam domain/function: PF01590 GAF; PF00158 Sigma54_activat [H]

EC number: NA

Molecular weight: Translated: 59766; Mature: 59766

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: PS00675 SIGMA54_INTERACT_1 ; PS00676 SIGMA54_INTERACT_2 ; PS00688 SIGMA54_INTERACT_3 ; PS50045 SIGMA54_INTERACT_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAQPMLKALVPLVDDLSREMPDGERYRRLLEAVRALLPCDATALLRLDGAALVPLAVNG
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHEEEECCCEEEEEEECC
LSSDTMGRRFKVEEHPRFKRLLEAGGPMRFPVDCELPDPYDGLVEGLHGHLEVHDCMGCP
CCCCCCCCEEECCCCHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHCCCEEEHHHCCCC
VQVGEKNWGVLTIDALNSQRFSAVDLGDLQAFASLAAATVSVVQRMERLTLRAEDERLRA
EEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
DTYRELAAESTPPALIGQSAAHQRLLEEIAVVGNSELTVLITGETGVGKELVAQALHAAS
HHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCC
PRAARPLISLNCAALPETLVESELFGHVRGAFSGAVADRRGKFELANGGTLFLDEVGELS
CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCHHH
LAVQAKLLRVLQNGQLQRLGSDREHQVDVRVIAATNRDLAHEVRAGRYRADFYHRLSVYP
HHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEEEECCCHHHHHHHHCCHHHHHHHHHEECE
LVVPPLRERGHDVLLLAGYFLEQNRSRLGLGSLRMDADAQASLLAHDWPGNVRELEHLVG
EECCCHHHCCCCEEEEEHHHHHCCCCCCCCCCEECCCCCHHHHEEECCCCCHHHHHHHHH
RSALKALAGVPGRPRILSLTASHLDLPAPASWGASAPDASGSKDAAVQEGMPDAGGAALP
HHHHHHHHCCCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEE
VDLRTSMEWHQRQRIAASLARHHNNWASAARELGLHRANLVRLAKRLGLRGEVGSPPDRP
EHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCC
RPGVQNPPKQGV
CCCCCCCCCCCC
>Mature Secondary Structure
MIAQPMLKALVPLVDDLSREMPDGERYRRLLEAVRALLPCDATALLRLDGAALVPLAVNG
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHEEEECCCEEEEEEECC
LSSDTMGRRFKVEEHPRFKRLLEAGGPMRFPVDCELPDPYDGLVEGLHGHLEVHDCMGCP
CCCCCCCCEEECCCCHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHCCCEEEHHHCCCC
VQVGEKNWGVLTIDALNSQRFSAVDLGDLQAFASLAAATVSVVQRMERLTLRAEDERLRA
EEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
DTYRELAAESTPPALIGQSAAHQRLLEEIAVVGNSELTVLITGETGVGKELVAQALHAAS
HHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCC
PRAARPLISLNCAALPETLVESELFGHVRGAFSGAVADRRGKFELANGGTLFLDEVGELS
CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCHHH
LAVQAKLLRVLQNGQLQRLGSDREHQVDVRVIAATNRDLAHEVRAGRYRADFYHRLSVYP
HHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEEEECCCHHHHHHHHCCHHHHHHHHHEECE
LVVPPLRERGHDVLLLAGYFLEQNRSRLGLGSLRMDADAQASLLAHDWPGNVRELEHLVG
EECCCHHHCCCCEEEEEHHHHHCCCCCCCCCCEECCCCCHHHHEEECCCCCHHHHHHHHH
RSALKALAGVPGRPRILSLTASHLDLPAPASWGASAPDASGSKDAAVQEGMPDAGGAALP
HHHHHHHHCCCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEE
VDLRTSMEWHQRQRIAASLARHHNNWASAARELGLHRANLVRLAKRLGLRGEVGSPPDRP
EHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCC
RPGVQNPPKQGV
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA