| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789259
Identifier: 91789259
GI number: 91789259
Start: 3600454
End: 3600954
Strand: Reverse
Name: 91789259
Synonym: Bpro_3404
Alternate gene names: NA
Gene position: 3600954-3600454 (Counterclockwise)
Preceding gene: 91789260
Following gene: 91789257
Centisome position: 69.25
GC content: 59.08
Gene sequence:
>501_bases TTGCGACACCGTCCTGCCGCCGTTGGCCACACGCAGGTGCACGCCAGAACCGGGTCGATGTTAAAAACGCGTCATGGCAA CTTCAATCCCACCTGTATGAACAGCGCCAGCGGCGCCGCGTGGTACGCGCAACTTGCCAAGCCCTTCTTTGCGCCGCCGG CTTTCGTGTTTGGACCGGTGTGGACTGTCCTCTATGTCATCATTGCCATCAGCTTTGGCTTTGTGCTGTGGCAGTGCCTC AGGCGACGGCTGCCCTTTGGCGTGCTGCTGCCTTTCATCCTGAACCTGTTGTTCAACGTGGTGTACACCCCGATACAGTT TGGTCTGAAGAACAATGCGCTGGCCAGTGTGGACGCCTTTCTTGTGCTGGTGACGCTGCTCTGGGCGATGGTCGTGATCT GGCGGCGTGCGCGGTGGGTGGTGTATGCCAACATTCCTTACCTGCTCTGGGTGGGCTTTGCCACCGTCCTGCAGTTCAGC ATCACCTGGCTCAACCGGTAA
Upstream 100 bases:
>100_bases GCAGCAATTTGATACAAAAAATACGCAGCCTGCCGGCCTCCGGATTCATCCGTTCATCCGTCTATTCAATGTATTAAAGC GCCGAGATTGTCCCGCGAGC
Downstream 100 bases:
>100_bases AGCACCGCCGTCCCCATGAGTCCGCAAGTCCGCTGTTTGCCTGGTGCTCGGCCACAGCACCGCGGCTCGTCCCAAGCTGC GATCAGTATGGCCGGCTTGG
Product: TspO and MBR-like protein
Products: NA
Alternate protein names: TspO And MBR Like Proteins
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MRHRPAAVGHTQVHARTGSMLKTRHGNFNPTCMNSASGAAWYAQLAKPFFAPPAFVFGPVWTVLYVIIAISFGFVLWQCL RRRLPFGVLLPFILNLLFNVVYTPIQFGLKNNALASVDAFLVLVTLLWAMVVIWRRARWVVYANIPYLLWVGFATVLQFS ITWLNR
Sequences:
>Translated_166_residues MRHRPAAVGHTQVHARTGSMLKTRHGNFNPTCMNSASGAAWYAQLAKPFFAPPAFVFGPVWTVLYVIIAISFGFVLWQCL RRRLPFGVLLPFILNLLFNVVYTPIQFGLKNNALASVDAFLVLVTLLWAMVVIWRRARWVVYANIPYLLWVGFATVLQFS ITWLNR >Mature_166_residues MRHRPAAVGHTQVHARTGSMLKTRHGNFNPTCMNSASGAAWYAQLAKPFFAPPAFVFGPVWTVLYVIIAISFGFVLWQCL RRRLPFGVLLPFILNLLFNVVYTPIQFGLKNNALASVDAFLVLVTLLWAMVVIWRRARWVVYANIPYLLWVGFATVLQFS ITWLNR
Specific function: Unknown
COG id: COG3476
COG function: function code T; Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18911; Mature: 18911
Theoretical pI: Translated: 11.92; Mature: 11.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHRPAAVGHTQVHARTGSMLKTRHGNFNPTCMNSASGAAWYAQLAKPFFAPPAFVFGPV CCCCCCCCCCHHHHHHHCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH WTVLYVIIAISFGFVLWQCLRRRLPFGVLLPFILNLLFNVVYTPIQFGLKNNALASVDAF HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LVLVTLLWAMVVIWRRARWVVYANIPYLLWVGFATVLQFSITWLNR HHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRHRPAAVGHTQVHARTGSMLKTRHGNFNPTCMNSASGAAWYAQLAKPFFAPPAFVFGPV CCCCCCCCCCHHHHHHHCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH WTVLYVIIAISFGFVLWQCLRRRLPFGVLLPFILNLLFNVVYTPIQFGLKNNALASVDAF HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LVLVTLLWAMVVIWRRARWVVYANIPYLLWVGFATVLQFSITWLNR HHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA