Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is livH [C]

Identifier: 91789177

GI number: 91789177

Start: 3515838

End: 3516719

Strand: Reverse

Name: livH [C]

Synonym: Bpro_3321

Alternate gene names: 91789177

Gene position: 3516719-3515838 (Counterclockwise)

Preceding gene: 91789178

Following gene: 91789176

Centisome position: 67.63

GC content: 61.22

Gene sequence:

>882_bases
ATGAGTGGCTACGCCAATATTCTGTTGGCCGGCGTGTTTCATGCCGCCGTGCTTTTTCTGGTTGCCTCCGGTCTGCAGCT
CATCTTTGGCGTGCAGCGCATCGTCAACCTGGCCTGCGGCTCGATCTACGCCCTCGGCGCCTACGCTGGAATAGCGGCTA
CGCACTGGGCTCTTTCCATCGGCTTGCCGCCGCCCTGGTTCCCGCTCGCGCTGCTGGGGGCGGGCCTTGCCGTCGGTCTG
GTAGGCATCCCGTTGGAAAGGCTGCTGCGCACCATTTATGGTCGGCAGGAGTCGTTCCAGCTGCTTCTTACTTTCGCCTT
GGTCCTGATGATCCAGGACACCCTCCGGTTTTTCTGGGGGGCGAACCCGCAGCAGCTGGGAAACCTTTCCATGTTGTACG
GCACCCTCGCCATCGGGGAGGTTTCCATGCCGCTGTACAACGCCTGCGTTATAGGCGCTGCAATTGGCCTGGCAGCAGCG
ATGGCATTTTTCCTCGGGCACACCCGGTGGGGCAAGATTGTTCGGGCAACTGCGGAAAACCGTGACGCCAGTGCCGCGAT
GGGCGTCAACGTGCAATTGGTCTACCTGGTTGTCTTCACGCTGGGCACCATGCTCGGTACTGTCGGCGGCGCCCTTGTGG
CACCGACAGCAGCGGCGTCACTGGAAATGGGTGTCGAACTCGTGGTAGAGGCTTTTGCCGTCGTCGTAATCGGTGGTCTC
GGAAGCATGAAAGGTGCGGCGGTGGGTGCGCTAATCGCAGGTCTCGTGCGGGCGGCAGCGGTGACGGTGTATCCAGAGGC
GGAAATACTTGCCATCTACGCAATCGTACTTGTCGTGCTGGTCTGGAAGCCCGCAGGCCTCTTCGGAAAGGTAGCCACCT
GA

Upstream 100 bases:

>100_bases
GGGTGGACAGCATGTACTCCGACCAGATCCAGAAGCCCGCAGGCGCGGACTTCTGGGAGTGGCTGAAGACTTCGAGCTTC
AAGGTTTAGGCGGATATTCG

Downstream 100 bases:

>100_bases
TGCTTCAATCTCTCACTGCCTCCATTTGGGGCGCGCCAACCGCGTCTCCACGGCGCTGGACGAAGGTCATTTTTGCCGTG
CTCGTGGCTGCTCTCTTCCT

Product: inner-membrane translocator

Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]

Alternate protein names: Branched-Chain Amino Acid ABC Transporter Permease Protein; ABC Transporter Permease Protein; ABC-Transporter; Branched-Chain Amino Acid ABC Transporter Permease; ABC Transporter Permease; Branched-Chain Amino Acid ABC Transporter; Branched Chain Amino Acid ABC Transporter Permease; Branched Chain Amino Acid ABC Transporter; ABC-Type Transport System Permease Protein; Permease Component Of ABC Transporter Protein; Branched-Chain Amino Acid Transport System Permease; Amino Acid ABC Transporter Permease; Amino Acid/Amide ABC Transporter Membrane HAAT Family; Permease Component Of ABC Transporter

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MSGYANILLAGVFHAAVLFLVASGLQLIFGVQRIVNLACGSIYALGAYAGIAATHWALSIGLPPPWFPLALLGAGLAVGL
VGIPLERLLRTIYGRQESFQLLLTFALVLMIQDTLRFFWGANPQQLGNLSMLYGTLAIGEVSMPLYNACVIGAAIGLAAA
MAFFLGHTRWGKIVRATAENRDASAAMGVNVQLVYLVVFTLGTMLGTVGGALVAPTAAASLEMGVELVVEAFAVVVIGGL
GSMKGAAVGALIAGLVRAAAVTVYPEAEILAIYAIVLVVLVWKPAGLFGKVAT

Sequences:

>Translated_293_residues
MSGYANILLAGVFHAAVLFLVASGLQLIFGVQRIVNLACGSIYALGAYAGIAATHWALSIGLPPPWFPLALLGAGLAVGL
VGIPLERLLRTIYGRQESFQLLLTFALVLMIQDTLRFFWGANPQQLGNLSMLYGTLAIGEVSMPLYNACVIGAAIGLAAA
MAFFLGHTRWGKIVRATAENRDASAAMGVNVQLVYLVVFTLGTMLGTVGGALVAPTAAASLEMGVELVVEAFAVVVIGGL
GSMKGAAVGALIAGLVRAAAVTVYPEAEILAIYAIVLVVLVWKPAGLFGKVAT
>Mature_292_residues
SGYANILLAGVFHAAVLFLVASGLQLIFGVQRIVNLACGSIYALGAYAGIAATHWALSIGLPPPWFPLALLGAGLAVGLV
GIPLERLLRTIYGRQESFQLLLTFALVLMIQDTLRFFWGANPQQLGNLSMLYGTLAIGEVSMPLYNACVIGAAIGLAAAM
AFFLGHTRWGKIVRATAENRDASAAMGVNVQLVYLVVFTLGTMLGTVGGALVAPTAAASLEMGVELVVEAFAVVVIGGLG
SMKGAAVGALIAGLVRAAAVTVYPEAEILAIYAIVLVVLVWKPAGLFGKVAT

Specific function: Part Of The Binding-Protein-Dependent Transport System For Branched-Chain Amino Acids. Probably Responsible For The Translocation Of The Substrates Across The Membrane. [C]

COG id: COG0559

COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789866, Length=281, Percent_Identity=23.4875444839858, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30301; Mature: 30169

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGYANILLAGVFHAAVLFLVASGLQLIFGVQRIVNLACGSIYALGAYAGIAATHWALSI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
GLPPPWFPLALLGAGLAVGLVGIPLERLLRTIYGRQESFQLLLTFALVLMIQDTLRFFWG
CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
ANPQQLGNLSMLYGTLAIGEVSMPLYNACVIGAAIGLAAAMAFFLGHTRWGKIVRATAEN
CCHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC
RDASAAMGVNVQLVYLVVFTLGTMLGTVGGALVAPTAAASLEMGVELVVEAFAVVVIGGL
CCCCHHCCCCHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
GSMKGAAVGALIAGLVRAAAVTVYPEAEILAIYAIVLVVLVWKPAGLFGKVAT
CCCHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SGYANILLAGVFHAAVLFLVASGLQLIFGVQRIVNLACGSIYALGAYAGIAATHWALSI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
GLPPPWFPLALLGAGLAVGLVGIPLERLLRTIYGRQESFQLLLTFALVLMIQDTLRFFWG
CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
ANPQQLGNLSMLYGTLAIGEVSMPLYNACVIGAAIGLAAAMAFFLGHTRWGKIVRATAEN
CCHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC
RDASAAMGVNVQLVYLVVFTLGTMLGTVGGALVAPTAAASLEMGVELVVEAFAVVVIGGL
CCCCHHCCCCHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
GSMKGAAVGALIAGLVRAAAVTVYPEAEILAIYAIVLVVLVWKPAGLFGKVAT
CCCHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]

Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA