Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yebA [H]

Identifier: 91789008

GI number: 91789008

Start: 3324386

End: 3326416

Strand: Direct

Name: yebA [H]

Synonym: Bpro_3148

Alternate gene names: 91789008

Gene position: 3324386-3326416 (Clockwise)

Preceding gene: 91789007

Following gene: 91789009

Centisome position: 63.93

GC content: 66.91

Gene sequence:

>2031_bases
ATGCTGACCCGCCTCACCACCCTCCCCCGCGAAGCCCGCGACACGCTGTTCCTGCTGCTGGTCATCGCGTGGGTGCTGCT
GCCGCAGGTGGGCAACCTGCCCTTGTGGTGCAGCGCACTGGCCGGCGCTGTGCTGGTCTGGCGCGGCTGGCTGACGCTGC
AGTCCCGGCCGCTGCCGGGCAAATGGTGGCTGGTCGGCCTGCTGGCCCTGACCATTGCCGCCACGCTGATGACCCACCGT
ACCCTGCTGGGACGCGACGCCGGCGTCACCCTGCTGGTCGTGTTGCTGACGCTGAAAACCCTGGAATTGCGCGCCCGGCG
CGATGCGTTTGTGGTGTTCTTCCTCGGTTTCTTCTGCATGCTGAGCAACTTTTTTTATTCGCAATCACTGCTCACCGCAG
CCAGCATGTTGCTGGGATTGCTGGGGCTGCTGACCGTGCTCGTCAATGCCCACATGCCGGTCGGCAAACCGCCGCTGGCG
CTGGCCGCGCGGACCGCCGGCGGGATGGTCCTGCTCGGCGCCCCTATCATGGTGGTGCTGTTCCTGCTGTTCCCGCGGCT
GGCGCCGCTCTGGGGCGTTCCCAGCGATGCCATGACCGGCCGCAGCGGCCTGAGTGCGAGCATGCAGGTGGGCAACATCG
CCACCCTGGCGCTGGACGACAGCGTGGCCATGCGCATCCGGTTTGAAGGCCGCCCGCCACCCCAGCAGGATTTGTATTTT
CGCGGCCCCGTGATGTCCAGCTTTGATGGCCGGGAGTGGCGACCGCCGCTGTTCAACTTCTCCCCGCGTGGCGGCCAGGG
CGGGGTGGGCAGCAATCTGTCCGTGGCGGGCGCTCCCGTCAGCTACGAAGTCACGCTGGAGCCCACCAGCCGTCCATGGC
TTTTTGTGATGGAAGCCGCAGCCCAGAGCCCGGTGTTGCCGGGCTATCGAAGCGTCATGCAGGCCGACCTGCAATGGACG
GTGAATCGTCCGATCACCGACCTTGTTCGCTACAAGGCACAGAGCTACCCAATCTTTCGGCATGGGCCGACGCGGCCGGT
CTTCGGGTTGCGGGAGTTTGTGGCGTTGCCCCCCGGCTTCAATCCGCGCACCCTCGCGCTGGCCAACGAGATACGCAGTG
ACCCGCGCTACCGAAACGCCAGCAATGCCCAACTGGTTCAGCTCGTGCTGGATCGCCTGCGCAGCGGCTACACCTACACC
CTGGAGCCCGGCGTGTATGGCCAGCACACGGCCGATGAATTCTGGTTTGACCGCAAGGAGGGTTTTTGTGAACACATCGC
ATCGGCCTTTGTGATCCTGATGCGGGCGATGGATATCCCCGCGCGCATCGTGACCGGCTACCAGGGCGGTGAATTGAACG
GGGTGGATGGCTTCTGGGTGGTGCGGCAAAGCGACGCCCATGCCTGGGCAGAAGTCTGGCAAGAGGACCGCGGCTGGGTA
CGGGTCGACCCGACCTCGGCGGTTGCCCCCGGGCGCACCGGCGCCTTCCAGCGGCTCGCTGCGCCCCAGGGCGTAGTGGC
CCAGACACTGGGAAACATCAGCCCGACGCTGGCGGCGCAGCTGCGCGCCACCTGGGAAGCGGTCAACAACGGCTGGAACC
AGTGGGTGCTCAACTACACCCAGGGCAAGCAGCTCAACCTGCTCAAGGAGATCGGCTTTGACTCCCCGAGCTGGGAGGAT
TTGAGCTACGTTCTGCTGGGCATCATCGTGCTGGCGGCACTGCTGGGCGCCGCCTGGACGCTGTGGGACCGCACCCAGCA
CGACCCGTGGCTGCGCCTGCTGGCCCGCGCACGCAGGCGGCTCGCCAAAGCCGGTATAGACAGCACCCCGGCCACCCCGC
CGCGCCAGCTGGCGCAGCAGGTGCTGGCACGCTATGGCGGCGGAAGCGGCAGCCCGGGGCAGGCACTGCACGACTGGCTG
ATGCAGCTGGAGCTGCAGCGCTACGCGGCGACGTCTTCCGGCCAGCGCAGCCAGCGCCGGGAAATCAGGCGCTTGCGGCA
GCAATGGAGCGCGCTGGCATGGCCTGCTTAA

Upstream 100 bases:

>100_bases
CTACCCCCGGCCAGCAGCCCTCAGCAGAGACCCAAAAAACCCCGCGGCAAAGACGATACCCGATCAGCGGCTCGGGCAGC
CAGCAGGAGCAGGAGCAGCG

Downstream 100 bases:

>100_bases
AATTGAAGCATCGCCCCGTTTTCTCCTCATGAAGCCTCAGATGCCTCTTTACAAGTTCAGTTTTGCGCTGGTTTTGATAA
CCGTCCTCGCCGGCACGGCA

Product: transglutaminase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 676; Mature: 676

Protein sequence:

>676_residues
MLTRLTTLPREARDTLFLLLVIAWVLLPQVGNLPLWCSALAGAVLVWRGWLTLQSRPLPGKWWLVGLLALTIAATLMTHR
TLLGRDAGVTLLVVLLTLKTLELRARRDAFVVFFLGFFCMLSNFFYSQSLLTAASMLLGLLGLLTVLVNAHMPVGKPPLA
LAARTAGGMVLLGAPIMVVLFLLFPRLAPLWGVPSDAMTGRSGLSASMQVGNIATLALDDSVAMRIRFEGRPPPQQDLYF
RGPVMSSFDGREWRPPLFNFSPRGGQGGVGSNLSVAGAPVSYEVTLEPTSRPWLFVMEAAAQSPVLPGYRSVMQADLQWT
VNRPITDLVRYKAQSYPIFRHGPTRPVFGLREFVALPPGFNPRTLALANEIRSDPRYRNASNAQLVQLVLDRLRSGYTYT
LEPGVYGQHTADEFWFDRKEGFCEHIASAFVILMRAMDIPARIVTGYQGGELNGVDGFWVVRQSDAHAWAEVWQEDRGWV
RVDPTSAVAPGRTGAFQRLAAPQGVVAQTLGNISPTLAAQLRATWEAVNNGWNQWVLNYTQGKQLNLLKEIGFDSPSWED
LSYVLLGIIVLAALLGAAWTLWDRTQHDPWLRLLARARRRLAKAGIDSTPATPPRQLAQQVLARYGGGSGSPGQALHDWL
MQLELQRYAATSSGQRSQRREIRRLRQQWSALAWPA

Sequences:

>Translated_676_residues
MLTRLTTLPREARDTLFLLLVIAWVLLPQVGNLPLWCSALAGAVLVWRGWLTLQSRPLPGKWWLVGLLALTIAATLMTHR
TLLGRDAGVTLLVVLLTLKTLELRARRDAFVVFFLGFFCMLSNFFYSQSLLTAASMLLGLLGLLTVLVNAHMPVGKPPLA
LAARTAGGMVLLGAPIMVVLFLLFPRLAPLWGVPSDAMTGRSGLSASMQVGNIATLALDDSVAMRIRFEGRPPPQQDLYF
RGPVMSSFDGREWRPPLFNFSPRGGQGGVGSNLSVAGAPVSYEVTLEPTSRPWLFVMEAAAQSPVLPGYRSVMQADLQWT
VNRPITDLVRYKAQSYPIFRHGPTRPVFGLREFVALPPGFNPRTLALANEIRSDPRYRNASNAQLVQLVLDRLRSGYTYT
LEPGVYGQHTADEFWFDRKEGFCEHIASAFVILMRAMDIPARIVTGYQGGELNGVDGFWVVRQSDAHAWAEVWQEDRGWV
RVDPTSAVAPGRTGAFQRLAAPQGVVAQTLGNISPTLAAQLRATWEAVNNGWNQWVLNYTQGKQLNLLKEIGFDSPSWED
LSYVLLGIIVLAALLGAAWTLWDRTQHDPWLRLLARARRRLAKAGIDSTPATPPRQLAQQVLARYGGGSGSPGQALHDWL
MQLELQRYAATSSGQRSQRREIRRLRQQWSALAWPA
>Mature_676_residues
MLTRLTTLPREARDTLFLLLVIAWVLLPQVGNLPLWCSALAGAVLVWRGWLTLQSRPLPGKWWLVGLLALTIAATLMTHR
TLLGRDAGVTLLVVLLTLKTLELRARRDAFVVFFLGFFCMLSNFFYSQSLLTAASMLLGLLGLLTVLVNAHMPVGKPPLA
LAARTAGGMVLLGAPIMVVLFLLFPRLAPLWGVPSDAMTGRSGLSASMQVGNIATLALDDSVAMRIRFEGRPPPQQDLYF
RGPVMSSFDGREWRPPLFNFSPRGGQGGVGSNLSVAGAPVSYEVTLEPTSRPWLFVMEAAAQSPVLPGYRSVMQADLQWT
VNRPITDLVRYKAQSYPIFRHGPTRPVFGLREFVALPPGFNPRTLALANEIRSDPRYRNASNAQLVQLVLDRLRSGYTYT
LEPGVYGQHTADEFWFDRKEGFCEHIASAFVILMRAMDIPARIVTGYQGGELNGVDGFWVVRQSDAHAWAEVWQEDRGWV
RVDPTSAVAPGRTGAFQRLAAPQGVVAQTLGNISPTLAAQLRATWEAVNNGWNQWVLNYTQGKQLNLLKEIGFDSPSWED
LSYVLLGIIVLAALLGAAWTLWDRTQHDPWLRLLARARRRLAKAGIDSTPATPPRQLAQQVLARYGGGSGSPGQALHDWL
MQLELQRYAATSSGQRSQRREIRRLRQQWSALAWPA

Specific function: Unknown

COG id: COG1305

COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002931 [H]

Pfam domain/function: PF01841 Transglut_core [H]

EC number: NA

Molecular weight: Translated: 74843; Mature: 74843

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTRLTTLPREARDTLFLLLVIAWVLLPQVGNLPLWCSALAGAVLVWRGWLTLQSRPLPG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCC
KWWLVGLLALTIAATLMTHRTLLGRDAGVTLLVVLLTLKTLELRARRDAFVVFFLGFFCM
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LSNFFYSQSLLTAASMLLGLLGLLTVLVNAHMPVGKPPLALAARTAGGMVLLGAPIMVVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEHHHHHHHH
FLLFPRLAPLWGVPSDAMTGRSGLSASMQVGNIATLALDDSVAMRIRFEGRPPPQQDLYF
HHHHHHHHHHCCCCCHHHCCCCCCCCCEECCCEEEEEECCCEEEEEEECCCCCCCCCCEE
RGPVMSSFDGREWRPPLFNFSPRGGQGGVGSNLSVAGAPVSYEVTLEPTSRPWLFVMEAA
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCCCEEEEEEHH
AQSPVLPGYRSVMQADLQWTVNRPITDLVRYKAQSYPIFRHGPTRPVFGLREFVALPPGF
CCCCCCCHHHHHHHHHHHEECCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHCCCCCC
NPRTLALANEIRSDPRYRNASNAQLVQLVLDRLRSGYTYTLEPGVYGQHTADEFWFDRKE
CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHCHHH
GFCEHIASAFVILMRAMDIPARIVTGYQGGELNGVDGFWVVRQSDAHAWAEVWQEDRGWV
HHHHHHHHHHHHHHHHHCCCHHHEECCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCEE
RVDPTSAVAPGRTGAFQRLAAPQGVVAQTLGNISPTLAAQLRATWEAVNNGWNQWVLNYT
EECCCCCCCCCCCCHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEECC
QGKQLNLLKEIGFDSPSWEDLSYVLLGIIVLAALLGAAWTLWDRTQHDPWLRLLARARRR
CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LAKAGIDSTPATPPRQLAQQVLARYGGGSGSPGQALHDWLMQLELQRYAATSSGQRSQRR
HHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH
EIRRLRQQWSALAWPA
HHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLTRLTTLPREARDTLFLLLVIAWVLLPQVGNLPLWCSALAGAVLVWRGWLTLQSRPLPG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCC
KWWLVGLLALTIAATLMTHRTLLGRDAGVTLLVVLLTLKTLELRARRDAFVVFFLGFFCM
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LSNFFYSQSLLTAASMLLGLLGLLTVLVNAHMPVGKPPLALAARTAGGMVLLGAPIMVVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEHHHHHHHH
FLLFPRLAPLWGVPSDAMTGRSGLSASMQVGNIATLALDDSVAMRIRFEGRPPPQQDLYF
HHHHHHHHHHCCCCCHHHCCCCCCCCCEECCCEEEEEECCCEEEEEEECCCCCCCCCCEE
RGPVMSSFDGREWRPPLFNFSPRGGQGGVGSNLSVAGAPVSYEVTLEPTSRPWLFVMEAA
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCCCEEEEEEHH
AQSPVLPGYRSVMQADLQWTVNRPITDLVRYKAQSYPIFRHGPTRPVFGLREFVALPPGF
CCCCCCCHHHHHHHHHHHEECCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHCCCCCC
NPRTLALANEIRSDPRYRNASNAQLVQLVLDRLRSGYTYTLEPGVYGQHTADEFWFDRKE
CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHCHHH
GFCEHIASAFVILMRAMDIPARIVTGYQGGELNGVDGFWVVRQSDAHAWAEVWQEDRGWV
HHHHHHHHHHHHHHHHHCCCHHHEECCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCEE
RVDPTSAVAPGRTGAFQRLAAPQGVVAQTLGNISPTLAAQLRATWEAVNNGWNQWVLNYT
EECCCCCCCCCCCCHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEECC
QGKQLNLLKEIGFDSPSWEDLSYVLLGIIVLAALLGAAWTLWDRTQHDPWLRLLARARRR
CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LAKAGIDSTPATPPRQLAQQVLARYGGGSGSPGQALHDWLMQLELQRYAATSSGQRSQRR
HHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH
EIRRLRQQWSALAWPA
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969499; 9384377 [H]