Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is marR [C]

Identifier: 91788979

GI number: 91788979

Start: 3293816

End: 3294271

Strand: Direct

Name: marR [C]

Synonym: Bpro_3119

Alternate gene names: 91788979

Gene position: 3293816-3294271 (Clockwise)

Preceding gene: 91788978

Following gene: 91788980

Centisome position: 63.34

GC content: 63.38

Gene sequence:

>456_bases
ATGCCCGAAAAATCTCCCGTCCCCGCCGTCGAGAACGTCAAGACCACTTACCTGGAGAGCCTGATCGGCTACAACGCACG
CCGCGCCGCGCTGGTCATCATCGACGCCTTCCTGCAGAAAATGGCCGTCTACGGCTTGCGGCCGGTGGATTTTTCGGTAC
TTTCCCTTATCCACCACAACCCCGGTATCACCTCGCGCCAGCTGTGCGCGACGCTCAACATCCAGCCGCCCAATCTGGTG
GGCATGATCAAGTCGCTGGAAAACCGCTCACTGCTGACCCGCCGGCCCCATCCCAACGACGGCCGGGCCGTCGGCCTGCA
CCTGACCGCCAGCGGGCAGGAACTGATGCACGATGCGGAACGCACGGCACAGGAGCTGGAGTCTGACGCCGCCAGCCGCT
TGACGGCGGCCGAGCGCAAGACCCTGATCCGCCTGCTGCAAAAAATCTACCTGTGA

Upstream 100 bases:

>100_bases
CTGCGCCACTGGGTACTGCCTGAATTCGACATGCGCATGGGTATCATCAAGGAGCGGCTGGACACCACCTGACCCGGCCA
TCTCCTTCATCCTCTACTTC

Downstream 100 bases:

>100_bases
GGCCTGGATGCCGCACGCAGGTGGCTCGGCCCGGTGGCCTGGCGTGTCGCCCCTCAACACCCGACACCTTGTGCGTTCAC
CGCGGCCTTTGAAGTCTTTT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MPEKSPVPAVENVKTTYLESLIGYNARRAALVIIDAFLQKMAVYGLRPVDFSVLSLIHHNPGITSRQLCATLNIQPPNLV
GMIKSLENRSLLTRRPHPNDGRAVGLHLTASGQELMHDAERTAQELESDAASRLTAAERKTLIRLLQKIYL

Sequences:

>Translated_151_residues
MPEKSPVPAVENVKTTYLESLIGYNARRAALVIIDAFLQKMAVYGLRPVDFSVLSLIHHNPGITSRQLCATLNIQPPNLV
GMIKSLENRSLLTRRPHPNDGRAVGLHLTASGQELMHDAERTAQELESDAASRLTAAERKTLIRLLQKIYL
>Mature_150_residues
PEKSPVPAVENVKTTYLESLIGYNARRAALVIIDAFLQKMAVYGLRPVDFSVLSLIHHNPGITSRQLCATLNIQPPNLVG
MIKSLENRSLLTRRPHPNDGRAVGLHLTASGQELMHDAERTAQELESDAASRLTAAERKTLIRLLQKIYL

Specific function: May be involved in the regulation of genes for 4- hydroxybenzoyl-CoA reductase [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16748; Mature: 16617

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEKSPVPAVENVKTTYLESLIGYNARRAALVIIDAFLQKMAVYGLRPVDFSVLSLIHHN
CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
PGITSRQLCATLNIQPPNLVGMIKSLENRSLLTRRPHPNDGRAVGLHLTASGQELMHDAE
CCCCHHHHHHCCCCCCCHHHHHHHHHHCCCHHCCCCCCCCCCEEEEEEECCCHHHHHHHH
RTAQELESDAASRLTAAERKTLIRLLQKIYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PEKSPVPAVENVKTTYLESLIGYNARRAALVIIDAFLQKMAVYGLRPVDFSVLSLIHHN
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
PGITSRQLCATLNIQPPNLVGMIKSLENRSLLTRRPHPNDGRAVGLHLTASGQELMHDAE
CCCCHHHHHHCCCCCCCHHHHHHHHHHCCCHHCCCCCCCCCCEEEEEEECCCHHHHHHHH
RTAQELESDAASRLTAAERKTLIRLLQKIYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9490068 [H]