Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788935

Identifier: 91788935

GI number: 91788935

Start: 3242550

End: 3243413

Strand: Direct

Name: 91788935

Synonym: Bpro_3075

Alternate gene names: NA

Gene position: 3242550-3243413 (Clockwise)

Preceding gene: 91788934

Following gene: 91788948

Centisome position: 62.35

GC content: 60.53

Gene sequence:

>864_bases
ATGGACCAAACACAAGACTTATCGGTAAACCGGCTGGCCGATGCCTGGGCGGAGTTGCAGGCGCATTCCAACCAGGGCTA
TCCCCTCCATGCCGATGCCAACCGGCTGGCATTTGCCGACCCGGAATTCCTGCTCCGGCGCGAAACCCGCGGTATCCGTT
TTCAGCTGGAGTTGCTCAAACCTGACCTGGAGCAGCAGGAACAAGGCATTGAAAACACCATTGTGGTGTTCGGCAGTGCG
CGATTCCCGCCGCCTGAACAGGCCAGCGCCAGCGTCAAACTGGCCGAGGAGAGTGGCGACGAGGAAGCGCTCCTGCTGGC
TCGCCGCCATGCGCGCAATGCGCACTATTACGACCAGGCACGCCTGTTCGCGCGCCTGGTTGCGACCTACAGCAACCATC
GCCCGCCCTCCGAGCAACTCTTCATCTGCACCGGCGGCGGCCCGGGCATCATGGAGGCAGCCAACCGCGGTGCCCAGGAA
ATGGGCGCGCTGACCGTGGGACTCAATATTGTGCTGCCCCACGAGCAGTCGGCCAACCCCTACATCTCACCCTCGGTGAA
CTTCAAGTTCCACTATTTCGCATTGCGCAAGATGCATTTCATGATGCGTGCCAAGGCACTGGTGGCTTTTCCGGGGGGGT
TCGGAACGCTCGATGAACTGTTCGAGGTCATCACGCTGGTGCAAACCGGCAAGGCCAAGCCGGTGCCCATCGTGCTCTTC
GGCTCCGAGTACTGGAAGCGGCTCTTCAACTTTGACGTGCTGATCGAAGAAGGCGCGATTGCGCCGGAAGACCTCAAGCT
GTTCCAGTATGTCGACGAACCGCAGGCCGCCTGGGACGCCATCAAGGATTTTTACCACCTCTAA

Upstream 100 bases:

>100_bases
CAAGCGCGTCTAAAAAGAATGAGGGCTTGCCGTCGGCTCAAAAAGGCTCCTCACGGAGCCTTTTTTACTTGGCGGCCGCT
CCAATCGTTCACAATGGCTT

Downstream 100 bases:

>100_bases
GCGGGGCGCCTCCACGCTCGCCCTGCGGGGCTAAACCCTTGGGGATACCGGCGCACCAACGCGGGTCTGGCGGAAATTGC
CTTTGGATCTCGCGCAGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MDQTQDLSVNRLADAWAELQAHSNQGYPLHADANRLAFADPEFLLRRETRGIRFQLELLKPDLEQQEQGIENTIVVFGSA
RFPPPEQASASVKLAEESGDEEALLLARRHARNAHYYDQARLFARLVATYSNHRPPSEQLFICTGGGPGIMEAANRGAQE
MGALTVGLNIVLPHEQSANPYISPSVNFKFHYFALRKMHFMMRAKALVAFPGGFGTLDELFEVITLVQTGKAKPVPIVLF
GSEYWKRLFNFDVLIEEGAIAPEDLKLFQYVDEPQAAWDAIKDFYHL

Sequences:

>Translated_287_residues
MDQTQDLSVNRLADAWAELQAHSNQGYPLHADANRLAFADPEFLLRRETRGIRFQLELLKPDLEQQEQGIENTIVVFGSA
RFPPPEQASASVKLAEESGDEEALLLARRHARNAHYYDQARLFARLVATYSNHRPPSEQLFICTGGGPGIMEAANRGAQE
MGALTVGLNIVLPHEQSANPYISPSVNFKFHYFALRKMHFMMRAKALVAFPGGFGTLDELFEVITLVQTGKAKPVPIVLF
GSEYWKRLFNFDVLIEEGAIAPEDLKLFQYVDEPQAAWDAIKDFYHL
>Mature_287_residues
MDQTQDLSVNRLADAWAELQAHSNQGYPLHADANRLAFADPEFLLRRETRGIRFQLELLKPDLEQQEQGIENTIVVFGSA
RFPPPEQASASVKLAEESGDEEALLLARRHARNAHYYDQARLFARLVATYSNHRPPSEQLFICTGGGPGIMEAANRGAQE
MGALTVGLNIVLPHEQSANPYISPSVNFKFHYFALRKMHFMMRAKALVAFPGGFGTLDELFEVITLVQTGKAKPVPIVLF
GSEYWKRLFNFDVLIEEGAIAPEDLKLFQYVDEPQAAWDAIKDFYHL

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32305; Mature: 32305

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQTQDLSVNRLADAWAELQAHSNQGYPLHADANRLAFADPEFLLRRETRGIRFQLELLK
CCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCEEECCHHHHHHHHCCCEEEEEEECC
PDLEQQEQGIENTIVVFGSARFPPPEQASASVKLAEESGDEEALLLARRHARNAHYYDQA
CCHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHH
RLFARLVATYSNHRPPSEQLFICTGGGPGIMEAANRGAQEMGALTVGLNIVLPHEQSANP
HHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCHHHHCEEEEEEEEEECCCCCCCC
YISPSVNFKFHYFALRKMHFMMRAKALVAFPGGFGTLDELFEVITLVQTGKAKPVPIVLF
EECCCCCEEEHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEE
GSEYWKRLFNFDVLIEEGAIAPEDLKLFQYVDEPQAAWDAIKDFYHL
CHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MDQTQDLSVNRLADAWAELQAHSNQGYPLHADANRLAFADPEFLLRRETRGIRFQLELLK
CCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCEEECCHHHHHHHHCCCEEEEEEECC
PDLEQQEQGIENTIVVFGSARFPPPEQASASVKLAEESGDEEALLLARRHARNAHYYDQA
CCHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHH
RLFARLVATYSNHRPPSEQLFICTGGGPGIMEAANRGAQEMGALTVGLNIVLPHEQSANP
HHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCHHHHCEEEEEEEEEECCCCCCCC
YISPSVNFKFHYFALRKMHFMMRAKALVAFPGGFGTLDELFEVITLVQTGKAKPVPIVLF
EECCCCCEEEHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEE
GSEYWKRLFNFDVLIEEGAIAPEDLKLFQYVDEPQAAWDAIKDFYHL
CHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA