| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788933
Identifier: 91788933
GI number: 91788933
Start: 3240676
End: 3241803
Strand: Direct
Name: 91788933
Synonym: Bpro_3073
Alternate gene names: NA
Gene position: 3240676-3241803 (Clockwise)
Preceding gene: 91788928
Following gene: 91788934
Centisome position: 62.32
GC content: 63.74
Gene sequence:
>1128_bases ATGGCTGACGTGCGTTTTTTGGACATCTTTTGCAAGGTCATCGACAACTTCGGGGACATTGGCGTGTGCTGGCGCCTGGC CGCCGACCTGGCCTCGCGCGGCCATCAGGTGCGGCTATGGGTCGATGACGCGTCGGCACTGGACTGGATGGCCCCCGCCC GTTGCAAAGGCGTTCGCGTGCTGCCCTGGGGCGAACCGCTGGACCTGGCCGCAGCCGGACTTGACCAGCAGCCATCCGAC GTGATGATTGAAGCCTTCGGCTGCGAAATTGCACCTGAATTCATCGCTGCCTGTGTCCGGCTTGAAAAGGCGGGCGGCAA AAAACCCGTCTGGATCAACCTCGAGTACCTGTCCGCCGAGCCCTATGTGGAGCGCTGCCACGCCATGCCGTCGCCCGTGC AGGGCGGACCGGCCGCCGGCTGGATCAAGTGGTTTTTTTACCCCGGCTTCACCCCTTCGACGGGCGGCCTGCTGTGCGAA GCCGACCTGGCCGAGCGCCAGGCCCGGTTTGACCGCGCCGCCTGGCTGGCCTCCCAGTCCATCCCATGGCGCGGCGAAAA GCTGGTTTCGCTGTATTGCTACGAGCCGTCCGCGCTCCCAGGGCTGCTCGCGCATTTTGCGGCGCATGGCCTCGAGGGCC AGCCGGTGCGCCTGCTGGTAGCGGCTGGACGGGCGGGGAATGCCGTGAAAGCCGCTTTGAGTCATGAAAATTGGCCCCTG CCCTTGGCAAACGGTCACAAATTGTTGTCAATTTCACACCTGAAGCTGCTGCCGCAAGCGCAGTTCGACCACCTGCTGTG GGCCTGCGACCTGAATTTTGTGCGCGGTGAAGACTCCGTGGTGCGCGCCCTCTGGGCCGGCAAACCTTTCGTCTGGCAGA TCTACCCGCAGCACGATGACGCACACCAGGCCAAGCTGCACGCCTTTCTCGACATGCTGGATGCCCCTCCTTCATTGCGG GCCTTTCATGCGCACTGGAATGCGGACGAAATCGAACTGGCCGGCGGTGCCAGCCCGGCGCCGGACTTGCCGGCATGGCA AATAACCACACTGGCAGCCCGGTCCCGCCTGCTGGCGCAGCAGGACCTGAGTACCCGCCTGCTCGAATTTGTGGCAAAAA ACCGTTAA
Upstream 100 bases:
>100_bases TCGGGCAATATTCACCTGCGTTACCGACGTTCATCGGCGGACCGGGCGCTGCCAGCCTGTGGCGCAGCTGCACCGACCGC CCCGGCATCACAATACCTGC
Downstream 100 bases:
>100_bases AATCAAAGGCTTTGCGGATCAGCCTGTTGGGCGAGCCGCACAACCCGCCGCAGAACCGCACACAGGTGCAAGCGTTCGGC GGCCTACCCTCAAGTAGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MADVRFLDIFCKVIDNFGDIGVCWRLAADLASRGHQVRLWVDDASALDWMAPARCKGVRVLPWGEPLDLAAAGLDQQPSD VMIEAFGCEIAPEFIAACVRLEKAGGKKPVWINLEYLSAEPYVERCHAMPSPVQGGPAAGWIKWFFYPGFTPSTGGLLCE ADLAERQARFDRAAWLASQSIPWRGEKLVSLYCYEPSALPGLLAHFAAHGLEGQPVRLLVAAGRAGNAVKAALSHENWPL PLANGHKLLSISHLKLLPQAQFDHLLWACDLNFVRGEDSVVRALWAGKPFVWQIYPQHDDAHQAKLHAFLDMLDAPPSLR AFHAHWNADEIELAGGASPAPDLPAWQITTLAARSRLLAQQDLSTRLLEFVAKNR
Sequences:
>Translated_375_residues MADVRFLDIFCKVIDNFGDIGVCWRLAADLASRGHQVRLWVDDASALDWMAPARCKGVRVLPWGEPLDLAAAGLDQQPSD VMIEAFGCEIAPEFIAACVRLEKAGGKKPVWINLEYLSAEPYVERCHAMPSPVQGGPAAGWIKWFFYPGFTPSTGGLLCE ADLAERQARFDRAAWLASQSIPWRGEKLVSLYCYEPSALPGLLAHFAAHGLEGQPVRLLVAAGRAGNAVKAALSHENWPL PLANGHKLLSISHLKLLPQAQFDHLLWACDLNFVRGEDSVVRALWAGKPFVWQIYPQHDDAHQAKLHAFLDMLDAPPSLR AFHAHWNADEIELAGGASPAPDLPAWQITTLAARSRLLAQQDLSTRLLEFVAKNR >Mature_374_residues ADVRFLDIFCKVIDNFGDIGVCWRLAADLASRGHQVRLWVDDASALDWMAPARCKGVRVLPWGEPLDLAAAGLDQQPSDV MIEAFGCEIAPEFIAACVRLEKAGGKKPVWINLEYLSAEPYVERCHAMPSPVQGGPAAGWIKWFFYPGFTPSTGGLLCEA DLAERQARFDRAAWLASQSIPWRGEKLVSLYCYEPSALPGLLAHFAAHGLEGQPVRLLVAAGRAGNAVKAALSHENWPLP LANGHKLLSISHLKLLPQAQFDHLLWACDLNFVRGEDSVVRALWAGKPFVWQIYPQHDDAHQAKLHAFLDMLDAPPSLRA FHAHWNADEIELAGGASPAPDLPAWQITTLAARSRLLAQQDLSTRLLEFVAKNR
Specific function: Unknown
COG id: COG4394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41311; Mature: 41180
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADVRFLDIFCKVIDNFGDIGVCWRLAADLASRGHQVRLWVDDASALDWMAPARCKGVRV CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHCCCEEE LPWGEPLDLAAAGLDQQPSDVMIEAFGCEIAPEFIAACVRLEKAGGKKPVWINLEYLSAE ECCCCCHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCC PYVERCHAMPSPVQGGPAAGWIKWFFYPGFTPSTGGLLCEADLAERQARFDRAAWLASQS HHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCC IPWRGEKLVSLYCYEPSALPGLLAHFAAHGLEGQPVRLLVAAGRAGNAVKAALSHENWPL CCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCC PLANGHKLLSISHLKLLPQAQFDHLLWACDLNFVRGEDSVVRALWAGKPFVWQIYPQHDD CCCCCCEEEEEHHHHHCCCHHHHHEEEEECCEEECCCHHHHHHHHCCCCEEEEEECCCCC AHQAKLHAFLDMLDAPPSLRAFHAHWNADEIELAGGASPAPDLPAWQITTLAARSRLLAQ HHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH QDLSTRLLEFVAKNR HHHHHHHHHHHHCCC >Mature Secondary Structure ADVRFLDIFCKVIDNFGDIGVCWRLAADLASRGHQVRLWVDDASALDWMAPARCKGVRV CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHCCCEEE LPWGEPLDLAAAGLDQQPSDVMIEAFGCEIAPEFIAACVRLEKAGGKKPVWINLEYLSAE ECCCCCHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCC PYVERCHAMPSPVQGGPAAGWIKWFFYPGFTPSTGGLLCEADLAERQARFDRAAWLASQS HHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCC IPWRGEKLVSLYCYEPSALPGLLAHFAAHGLEGQPVRLLVAAGRAGNAVKAALSHENWPL CCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCC PLANGHKLLSISHLKLLPQAQFDHLLWACDLNFVRGEDSVVRALWAGKPFVWQIYPQHDD CCCCCCEEEEEHHHHHCCCHHHHHEEEEECCEEECCCHHHHHHHHCCCCEEEEEECCCCC AHQAKLHAFLDMLDAPPSLRAFHAHWNADEIELAGGASPAPDLPAWQITTLAARSRLLAQ HHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH QDLSTRLLEFVAKNR HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA