| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is rcp1 [H]
Identifier: 91788923
GI number: 91788923
Start: 3228028
End: 3228471
Strand: Direct
Name: rcp1 [H]
Synonym: Bpro_3063
Alternate gene names: 91788923
Gene position: 3228028-3228471 (Clockwise)
Preceding gene: 91788922
Following gene: 91788928
Centisome position: 62.07
GC content: 58.56
Gene sequence:
>444_bases ATGAGCACACCGACGATGCTGGTGGTAGAGGACAATACCGACCACCTCGAATTGACCTTGACCACGCTGCAACAAAACGG GGTGCCTCATGACATCGTGATCGCCCGGGATGGACGCGAGGCCCTCGACTATTTATTTTGCGAGGGTGTTTATAAAGACC GCAACGCCAACAGCCAGCCCGAACTGGTCCTGCTGGATCTGGGGCTGCCCAAGCTGAGCGGCCTGGAGGTGATGCGGCGC ATGCGGGAGGATCCCCGGACGTTTTTTGTTCCGGTCGTGATGCTGACCCTGGTGAGCGAGCAATCCGAGGCGGTGCGCGC ATTCAAAGGCGGGCTCAACAGCTACGTGAGCAAGCCGCTCGACTACCGTGACTTTGAGGAAAAGCTCCAGCAGGTCCGGG AATATTGGCGCACCTCCAACTTCGCACCGCTTACCATCATCTGA
Upstream 100 bases:
>100_bases TGCGGGCATTTTCCGCAGTTTGACGCGGCACCATCAACACCATCAATTACTGCAACACATTTAAAAGGTATATTGAAGAC TCATTACCGAGGAGCAGCCA
Downstream 100 bases:
>100_bases CCAGCCGCGAAACCTGCCCGAGGCCAGGCACGCTGGTGCCCGCCGGTCTTTCTTTACTTGCTCGTGACGTTTTTAGCGTT GCAGGCTGCCTTGATGATGC
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSTPTMLVVEDNTDHLELTLTTLQQNGVPHDIVIARDGREALDYLFCEGVYKDRNANSQPELVLLDLGLPKLSGLEVMRR MREDPRTFFVPVVMLTLVSEQSEAVRAFKGGLNSYVSKPLDYRDFEEKLQQVREYWRTSNFAPLTII
Sequences:
>Translated_147_residues MSTPTMLVVEDNTDHLELTLTTLQQNGVPHDIVIARDGREALDYLFCEGVYKDRNANSQPELVLLDLGLPKLSGLEVMRR MREDPRTFFVPVVMLTLVSEQSEAVRAFKGGLNSYVSKPLDYRDFEEKLQQVREYWRTSNFAPLTII >Mature_146_residues STPTMLVVEDNTDHLELTLTTLQQNGVPHDIVIARDGREALDYLFCEGVYKDRNANSQPELVLLDLGLPKLSGLEVMRRM REDPRTFFVPVVMLTLVSEQSEAVRAFKGGLNSYVSKPLDYRDFEEKLQQVREYWRTSNFAPLTII
Specific function: Forms a two-component system with cph1 in which it acts as receiver substrate [H]
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786599, Length=127, Percent_Identity=30.7086614173228, Blast_Score=60, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 16864; Mature: 16732
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPTMLVVEDNTDHLELTLTTLQQNGVPHDIVIARDGREALDYLFCEGVYKDRNANSQP CCCCCEEEEECCCCEEEEEEEEHHCCCCCCEEEEECCCHHHHHHHHHCCHHCCCCCCCCC ELVLLDLGLPKLSGLEVMRRMREDPRTFFVPVVMLTLVSEQSEAVRAFKGGLNSYVSKPL CEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHCCCC DYRDFEEKLQQVREYWRTSNFAPLTII CCCHHHHHHHHHHHHHHCCCCCEEEEC >Mature Secondary Structure STPTMLVVEDNTDHLELTLTTLQQNGVPHDIVIARDGREALDYLFCEGVYKDRNANSQP CCCCEEEEECCCCEEEEEEEEHHCCCCCCEEEEECCCHHHHHHHHHCCHHCCCCCCCCC ELVLLDLGLPKLSGLEVMRRMREDPRTFFVPVVMLTLVSEQSEAVRAFKGGLNSYVSKPL CEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHCCCC DYRDFEEKLQQVREYWRTSNFAPLTII CCCHHHHHHHHHHHHHHCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231; 9278513 [H]