| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788834
Identifier: 91788834
GI number: 91788834
Start: 3131730
End: 3132812
Strand: Direct
Name: 91788834
Synonym: Bpro_2974
Alternate gene names: NA
Gene position: 3131730-3132812 (Clockwise)
Preceding gene: 91788833
Following gene: 91788835
Centisome position: 60.22
GC content: 64.45
Gene sequence:
>1083_bases ATGTACGAAAACACGAACTTTCCACCCCGCGGCTCCGGCGTCGTGCGCGCGTTGATCTCGAACATACTCGCGCAAAAGAA TGCCGAAGGGCCAGTCGGCGCACTGCGCATTGCTGAGCAGCGCTGGGGCAAGGGCAGTGAAGTGGCTGTCATCACACGCG CAGCGGTTGCAGGTGGAAGCACAGCCAGCGGCGCCTGGGGCGCCGAGCTTGAAGCCCAATCTGCTGTTGCTGAATTCCTG GAGATCGTGACGCCTATGACCATCCTCGGACGGACGGCGAACTTGCGCCGGGTGCCAGTGGGTGTGCCAGTGGTGAAACA AACCGGCGCTGCGACCGGCTACTGGGTCGCACAAGGCAAGGCGACCCCGTTGAGCAGCATGGCATTTGATCGCACGACGC TCGAGGCCAAAATGCGCGTCGGCGCGATAGTGGTGGTCTCAAATGACTTGCTGGAGGCACCAGGCGGCGACGAGGTGTTG CGCGGCGACCTGGCCCTGGCCGTAGCAAGCGCCACTGACGCGGCATTCATCGACCACCAGAATGCAGGCGTGGCTGGCGA AAAGCCGCCGGGGATCGCTTACGGGATGCCCGCGATCCCTGCCTCGGGCAGCGATGCCGCAACGTTCAAGGTGGACATCG CCAACGCGCTCGAGGCCTTCACGGGCTCCCTGATGAACGCGGTCTGGGTCATGCATCCTCGGGCAGCCGCGGCAATCGGG CTGTTGATGGGTGCGGCGGGCGTGGCCTGCAACTTGGGCGCCCGCGGTGGCGAGTTGGCCGGCCTGCCCGTCCTGACCAG CGAGCTCGTGGAAATCACCACGGACGGCACCGCGATTACCCTCTTTGACGCCTCGTCGGTTTTGATCACCGAAGGTACGC TGATCATGGGAAAAAACTCCGACGGCGCCGTGGAAATGGACAACGAGCCAACGGGCGACGGCACGCCGACCGCCGCGACC ACCCTGGTCCCACTCTGGCAAACCGAATCTACCGGCCTCAAGGTGGGGCGCCATATCGAATGGGAGCTCGGCCGGCCAGG CGCTGCTGTGGTCATTACTGGTGTTCCTTTCGGGGCGCTCTGA
Upstream 100 bases:
>100_bases AACAAAAAAGAGGTCATTGAACGTCATCCAACGACATCGGGCGTTATCGCTTTTGCAGCTGCGCGATGGCCCAATTAAAG AACTTTTGAAGGACCTCCTC
Downstream 100 bases:
>100_bases TGAAACTGGACAACCCGGAACTGCGGGACTCGAAAACGCAGGTAACTATGGGCTTTCTGCTCAGAGTGGCAGACATGCTC ATCGCGAAGATGACAGAGCA
Product: putative major phage head protein/prohead proteinase
Products: NA
Alternate protein names: Phage Head Protein/Prohead Proteinase; Phage-Related Protein; Phage Head Maturation Protease; Head Protein/Prohead Protease
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MYENTNFPPRGSGVVRALISNILAQKNAEGPVGALRIAEQRWGKGSEVAVITRAAVAGGSTASGAWGAELEAQSAVAEFL EIVTPMTILGRTANLRRVPVGVPVVKQTGAATGYWVAQGKATPLSSMAFDRTTLEAKMRVGAIVVVSNDLLEAPGGDEVL RGDLALAVASATDAAFIDHQNAGVAGEKPPGIAYGMPAIPASGSDAATFKVDIANALEAFTGSLMNAVWVMHPRAAAAIG LLMGAAGVACNLGARGGELAGLPVLTSELVEITTDGTAITLFDASSVLITEGTLIMGKNSDGAVEMDNEPTGDGTPTAAT TLVPLWQTESTGLKVGRHIEWELGRPGAAVVITGVPFGAL
Sequences:
>Translated_360_residues MYENTNFPPRGSGVVRALISNILAQKNAEGPVGALRIAEQRWGKGSEVAVITRAAVAGGSTASGAWGAELEAQSAVAEFL EIVTPMTILGRTANLRRVPVGVPVVKQTGAATGYWVAQGKATPLSSMAFDRTTLEAKMRVGAIVVVSNDLLEAPGGDEVL RGDLALAVASATDAAFIDHQNAGVAGEKPPGIAYGMPAIPASGSDAATFKVDIANALEAFTGSLMNAVWVMHPRAAAAIG LLMGAAGVACNLGARGGELAGLPVLTSELVEITTDGTAITLFDASSVLITEGTLIMGKNSDGAVEMDNEPTGDGTPTAAT TLVPLWQTESTGLKVGRHIEWELGRPGAAVVITGVPFGAL >Mature_360_residues MYENTNFPPRGSGVVRALISNILAQKNAEGPVGALRIAEQRWGKGSEVAVITRAAVAGGSTASGAWGAELEAQSAVAEFL EIVTPMTILGRTANLRRVPVGVPVVKQTGAATGYWVAQGKATPLSSMAFDRTTLEAKMRVGAIVVVSNDLLEAPGGDEVL RGDLALAVASATDAAFIDHQNAGVAGEKPPGIAYGMPAIPASGSDAATFKVDIANALEAFTGSLMNAVWVMHPRAAAAIG LLMGAAGVACNLGARGGELAGLPVLTSELVEITTDGTAITLFDASSVLITEGTLIMGKNSDGAVEMDNEPTGDGTPTAAT TLVPLWQTESTGLKVGRHIEWELGRPGAAVVITGVPFGAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36621; Mature: 36621
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYENTNFPPRGSGVVRALISNILAQKNAEGPVGALRIAEQRWGKGSEVAVITRAAVAGGS CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHEEEHHHHCCCCCCEEEEEEEEECCCC TASGAWGAELEAQSAVAEFLEIVTPMTILGRTANLRRVPVGVPVVKQTGAATGYWVAQGK CCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCEECCCCCCEECCCCCCCEEEEECCC ATPLSSMAFDRTTLEAKMRVGAIVVVSNDLLEAPGGDEVLRGDLALAVASATDAAFIDHQ CCCHHHHHCCHHHHHEEEEEEEEEEEECCHHCCCCCCCEEECCEEEEEECCCCEEEEECC NAGVAGEKPPGIAYGMPAIPASGSDAATFKVDIANALEAFTGSLMNAVWVMHPRAAAAIG CCCCCCCCCCCCEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHEEECCHHHHHHH LLMGAAGVACNLGARGGELAGLPVLTSELVEITTDGTAITLFDASSVLITEGTLIMGKNS HHHHCCCCEEECCCCCCCCCCCCHHHHHHEEEECCCCEEEEEECCEEEEECCEEEEECCC DGAVEMDNEPTGDGTPTAATTLVPLWQTESTGLKVGRHIEWELGRPGAAVVITGVPFGAL CCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCEECCEEEEECCCCCCEEEEECCCCCCC >Mature Secondary Structure MYENTNFPPRGSGVVRALISNILAQKNAEGPVGALRIAEQRWGKGSEVAVITRAAVAGGS CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHEEEHHHHCCCCCCEEEEEEEEECCCC TASGAWGAELEAQSAVAEFLEIVTPMTILGRTANLRRVPVGVPVVKQTGAATGYWVAQGK CCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCEECCCCCCEECCCCCCCEEEEECCC ATPLSSMAFDRTTLEAKMRVGAIVVVSNDLLEAPGGDEVLRGDLALAVASATDAAFIDHQ CCCHHHHHCCHHHHHEEEEEEEEEEEECCHHCCCCCCCEEECCEEEEEECCCCEEEEECC NAGVAGEKPPGIAYGMPAIPASGSDAATFKVDIANALEAFTGSLMNAVWVMHPRAAAAIG CCCCCCCCCCCCEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHEEECCHHHHHHH LLMGAAGVACNLGARGGELAGLPVLTSELVEITTDGTAITLFDASSVLITEGTLIMGKNS HHHHCCCCEEECCCCCCCCCCCCHHHHHHEEEECCCCEEEEEECCEEEEECCEEEEECCC DGAVEMDNEPTGDGTPTAATTLVPLWQTESTGLKVGRHIEWELGRPGAAVVITGVPFGAL CCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCEECCEEEEECCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA