| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788829
Identifier: 91788829
GI number: 91788829
Start: 3128878
End: 3130116
Strand: Direct
Name: 91788829
Synonym: Bpro_2969
Alternate gene names: NA
Gene position: 3128878-3130116 (Clockwise)
Preceding gene: 91788828
Following gene: 91788830
Centisome position: 60.17
GC content: 60.29
Gene sequence:
>1239_bases ATGAACGTGGAAAACTACGACCACTTCGCAGCGTTGCTGGATGCTGACGCGGGCATAACCGAAACGACTATCCCCGATGG CGTGGTGCTGATTAACGGTAGCGACCTCACCCCGGAGGCTGTGCGCTGGCTTTGGCAATACTGGCTGGCGCTGGGCAAGC TGCACATCCTGGCCGGTGCGCCCGGGCAGGGTAAAACCACCATCGCACTTGCTGCAATGGCAACCGTGACGATTGGCGGA CGCTGGCCCGATGGTTCACGCTGCGAACCCGGCAACGTGTTGATGTGGAGCGGCGAGGATGACCCAGCCGACACACTGTT ACCCCGTCTTATAGCCGCAGGCGCGGACCGTTCCCGCTGCTACTTCGTGAGTGGCACGCGTATTGATGGCGAGCTGCAAG CGTTTGATCCGGCCCGCGATATGGAGGCGCTGGAGTATCAGGCACGCGCCATCGGGGGCGTGAAGCTGATTGTTGTTGAT CCGGTTGTGTCTGCTGTGGCTGGCGACTCGCACAAAAACACCGAAGTTCGCAGGGCGCTGCAACCGCTGGTTGACCTGGC TAGCCGCCTTGATTGCGCTGTGCTGGGAATCAGCCACTTTTCTAAAGGTGGCGCGGGCAGTGATCCAGCTTCCCGCGTAG TCGGCTCGATTGCCTTTACCGCCGTGGCCCGCGTTGTGCTGGTGGCGGCAAAGGTAAGGGGCGAAGACGGCGAAGACCGC CGGATCCTGGCACGCGGCAAGTCCAACATCGGCCCGGACGATGGCGGGTTTGAATATCAGCTTGAGCAGATAGAAGCCCT GCCGGGGATTCAGGCCAGCCGCATCACATGGGGCAAGGCTGTAGAGGGTACGGCCCGCGAACTGCTGACAGACCCGAACG AAACCGATTCGAACGATGCCACATCGGACGCCGGCGAGGCTGTAGCAATGCTCAGGGCCGAACTGTCCGCCGACCACTGG ACACCTTGCGACACCTGCACCCAGCCGCTGAAAGATGCGGGTTTCACGAAAAAGCAGATATGGACCGCATCTAAAAAGCT GGACGTCAAACGTCAAAAAGCCGGCATGGATAAGGGTTGGCAGTGGCGCTTGCGTGACCCCGGCGAGGGAACATTCACCA CCGCTTATCCCGAAGATTCCGCCGAAGGTTCCGAAGGCTCCAACATTCTGAACGGGGAATCTTCGGAATCTTCGGGGCGT TTGGAATCTTCGGTGGCCGCTGATTCGGAGGTGTTTTGA
Upstream 100 bases:
>100_bases CGGCCGCGAACCTTGCGCATGGCGTAGTGCTATCAAACAAGGATCGTGCGCGTCTCCTGGTGGCTGCCGGCCGCATCCAG CACGTTGCGGAGGTGTTCGC
Downstream 100 bases:
>100_bases TGACACCAGAATCCATTCTGGAACTGCTTTGGGCGCAAGGGTTCACCGTCTGCCTTGTGGAACGCTACAGGCTGGCCGTC AGCCCTGCCAGCACCCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MNVENYDHFAALLDADAGITETTIPDGVVLINGSDLTPEAVRWLWQYWLALGKLHILAGAPGQGKTTIALAAMATVTIGG RWPDGSRCEPGNVLMWSGEDDPADTLLPRLIAAGADRSRCYFVSGTRIDGELQAFDPARDMEALEYQARAIGGVKLIVVD PVVSAVAGDSHKNTEVRRALQPLVDLASRLDCAVLGISHFSKGGAGSDPASRVVGSIAFTAVARVVLVAAKVRGEDGEDR RILARGKSNIGPDDGGFEYQLEQIEALPGIQASRITWGKAVEGTARELLTDPNETDSNDATSDAGEAVAMLRAELSADHW TPCDTCTQPLKDAGFTKKQIWTASKKLDVKRQKAGMDKGWQWRLRDPGEGTFTTAYPEDSAEGSEGSNILNGESSESSGR LESSVAADSEVF
Sequences:
>Translated_412_residues MNVENYDHFAALLDADAGITETTIPDGVVLINGSDLTPEAVRWLWQYWLALGKLHILAGAPGQGKTTIALAAMATVTIGG RWPDGSRCEPGNVLMWSGEDDPADTLLPRLIAAGADRSRCYFVSGTRIDGELQAFDPARDMEALEYQARAIGGVKLIVVD PVVSAVAGDSHKNTEVRRALQPLVDLASRLDCAVLGISHFSKGGAGSDPASRVVGSIAFTAVARVVLVAAKVRGEDGEDR RILARGKSNIGPDDGGFEYQLEQIEALPGIQASRITWGKAVEGTARELLTDPNETDSNDATSDAGEAVAMLRAELSADHW TPCDTCTQPLKDAGFTKKQIWTASKKLDVKRQKAGMDKGWQWRLRDPGEGTFTTAYPEDSAEGSEGSNILNGESSESSGR LESSVAADSEVF >Mature_412_residues MNVENYDHFAALLDADAGITETTIPDGVVLINGSDLTPEAVRWLWQYWLALGKLHILAGAPGQGKTTIALAAMATVTIGG RWPDGSRCEPGNVLMWSGEDDPADTLLPRLIAAGADRSRCYFVSGTRIDGELQAFDPARDMEALEYQARAIGGVKLIVVD PVVSAVAGDSHKNTEVRRALQPLVDLASRLDCAVLGISHFSKGGAGSDPASRVVGSIAFTAVARVVLVAAKVRGEDGEDR RILARGKSNIGPDDGGFEYQLEQIEALPGIQASRITWGKAVEGTARELLTDPNETDSNDATSDAGEAVAMLRAELSADHW TPCDTCTQPLKDAGFTKKQIWTASKKLDVKRQKAGMDKGWQWRLRDPGEGTFTTAYPEDSAEGSEGSNILNGESSESSGR LESSVAADSEVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43914; Mature: 43914
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVENYDHFAALLDADAGITETTIPDGVVLINGSDLTPEAVRWLWQYWLALGKLHILAGA CCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEECC PGQGKTTIALAAMATVTIGGRWPDGSRCEPGNVLMWSGEDDPADTLLPRLIAAGADRSRC CCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCEE YFVSGTRIDGELQAFDPARDMEALEYQARAIGGVKLIVVDPVVSAVAGDSHKNTEVRRAL EEEECCEECCCEECCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCCCCCCHHHHHHH QPLVDLASRLDCAVLGISHFSKGGAGSDPASRVVGSIAFTAVARVVLVAAKVRGEDGEDR HHHHHHHHHCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC RILARGKSNIGPDDGGFEYQLEQIEALPGIQASRITWGKAVEGTARELLTDPNETDSNDA EEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHCCCCCCCCCCC TSDAGEAVAMLRAELSADHWTPCDTCTQPLKDAGFTKKQIWTASKKLDVKRQKAGMDKGW CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC QWRLRDPGEGTFTTAYPEDSAEGSEGSNILNGESSESSGRLESSVAADSEVF EEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC >Mature Secondary Structure MNVENYDHFAALLDADAGITETTIPDGVVLINGSDLTPEAVRWLWQYWLALGKLHILAGA CCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEECC PGQGKTTIALAAMATVTIGGRWPDGSRCEPGNVLMWSGEDDPADTLLPRLIAAGADRSRC CCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCEE YFVSGTRIDGELQAFDPARDMEALEYQARAIGGVKLIVVDPVVSAVAGDSHKNTEVRRAL EEEECCEECCCEECCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCCCCCCHHHHHHH QPLVDLASRLDCAVLGISHFSKGGAGSDPASRVVGSIAFTAVARVVLVAAKVRGEDGEDR HHHHHHHHHCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC RILARGKSNIGPDDGGFEYQLEQIEALPGIQASRITWGKAVEGTARELLTDPNETDSNDA EEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHCCCCCCCCCCC TSDAGEAVAMLRAELSADHWTPCDTCTQPLKDAGFTKKQIWTASKKLDVKRQKAGMDKGW CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC QWRLRDPGEGTFTTAYPEDSAEGSEGSNILNGESSESSGRLESSVAADSEVF EEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA