| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is exbB [C]
Identifier: 91788807
GI number: 91788807
Start: 3109524
End: 3110162
Strand: Direct
Name: exbB [C]
Synonym: Bpro_2947
Alternate gene names: 91788807
Gene position: 3109524-3110162 (Clockwise)
Preceding gene: 91788804
Following gene: 91788808
Centisome position: 59.8
GC content: 62.44
Gene sequence:
>639_bases TTGTTTTCGATCATACAAGCCGCAGGCTGGCCGATATGGCCTTTGCTTGCCTGCTCCGTCTTGGCGCTTGCGCTGGTCAT TGAGCGTTTTACCAGCCTGAAAACCCCCAAGGTCGCGCCGCCAAGACTGCTTGACGAAGCCATCACGGTCTCCCGTTCCG CCGTACCGGCGCCAGAGGTGGTGTCGCAACTGGAACAAAACTCGGTTCTTGGCGAGGTGCTGGCCAGCGGGTTTCGTGCC CTGAACGCCAACCCGCGGATCAGCGAGGACGATTTGCGCTCCATCCTGGAGGGAGCCGGTCGCCAGGCAGCCCACAAGCT GGAGCGTTACCTGGCCGCCCTGGCCACCATTGCCTCTGCTGCGCCCTTGCTGGGACTGCTGGGCACCGTCATCGGCATGA TCGAGATTTTCGGCGCCCAAGCTGGTGCCGGCGGCGTCAGCAGTTCCGGCGGCGGTAACCCGGTGCAGATGGCGCAGGGT ATCTCGATCGCCCTGTACAACACCGCATTCGGGCTGATGGTGGCCATACCATCCCTGATTTTCTGGCGCTATTTCCGGGC CCAGGTTGACGGTTACCTGCTCACGATGGAGCTGGCTGCGGAGCGCTTCGTGCGCCACCTCAATACGCTGCGGAAATGA
Upstream 100 bases:
>100_bases GGAACGCCATTTTTGAAACAGGTTTGCGGGCCACACATAAAACAGCGGCCCGGATTTGGTGGGCCATAATCCAGACAAAT TATTTGCCTGGAGATGTGCA
Downstream 100 bases:
>100_bases ATATGGCCCCCACGCTTGCCACTGCGTGTGCTGCGCTGCCCCCCGAGGGGGCTGAACTTGCTCGGGGCGGCCCTTCGCTG CGTTCAATGGCCCCCACGCT
Product: MotA/TolQ/ExbB proton channel
Products: NA
Alternate protein names: MotA/lQ/ExbB Proton Channel Family Protein; ExbB-Like Biopolymer Transport; Biopolymer Transport ExbB-Like Transmembrane Protein; Biopolymer Transporter ExbB; Biopolymer Transport Protein ExbB; Biopolymer Transport Exbb Transmembrane Protein; MotA/lQ/ExbB Proton Channel Family Domain Protein; Transporter MotA/lQ/ExbB Proton Channel Family; Biopolymer Transport Channel Protein; Transporter MotA/lQ/ExbB Proton Channel Family Protein; Biopolymer Transporter; MotA/lQ/ExbB Proton Channel Family; Mota/lq/Exbb Proton Channel
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MFSIIQAAGWPIWPLLACSVLALALVIERFTSLKTPKVAPPRLLDEAITVSRSAVPAPEVVSQLEQNSVLGEVLASGFRA LNANPRISEDDLRSILEGAGRQAAHKLERYLAALATIASAAPLLGLLGTVIGMIEIFGAQAGAGGVSSSGGGNPVQMAQG ISIALYNTAFGLMVAIPSLIFWRYFRAQVDGYLLTMELAAERFVRHLNTLRK
Sequences:
>Translated_212_residues MFSIIQAAGWPIWPLLACSVLALALVIERFTSLKTPKVAPPRLLDEAITVSRSAVPAPEVVSQLEQNSVLGEVLASGFRA LNANPRISEDDLRSILEGAGRQAAHKLERYLAALATIASAAPLLGLLGTVIGMIEIFGAQAGAGGVSSSGGGNPVQMAQG ISIALYNTAFGLMVAIPSLIFWRYFRAQVDGYLLTMELAAERFVRHLNTLRK >Mature_212_residues MFSIIQAAGWPIWPLLACSVLALALVIERFTSLKTPKVAPPRLLDEAITVSRSAVPAPEVVSQLEQNSVLGEVLASGFRA LNANPRISEDDLRSILEGAGRQAAHKLERYLAALATIASAAPLLGLLGTVIGMIEIFGAQAGAGGVSSSGGGNPVQMAQG ISIALYNTAFGLMVAIPSLIFWRYFRAQVDGYLLTMELAAERFVRHLNTLRK
Specific function: Involved In The Tonb-Dependent Energy-Dependent Transport Of Various Receptor-Bound Substrates. Protects Exbd From Proteolytic Degradation And Functionally Stabilizes Tonb. [C]
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22541; Mature: 22541
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSIIQAAGWPIWPLLACSVLALALVIERFTSLKTPKVAPPRLLDEAITVSRSAVPAPEV CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHH VSQLEQNSVLGEVLASGFRALNANPRISEDDLRSILEGAGRQAAHKLERYLAALATIASA HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH APLLGLLGTVIGMIEIFGAQAGAGGVSSSGGGNPVQMAQGISIALYNTAFGLMVAIPSLI HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHH FWRYFRAQVDGYLLTMELAAERFVRHLNTLRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFSIIQAAGWPIWPLLACSVLALALVIERFTSLKTPKVAPPRLLDEAITVSRSAVPAPEV CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHH VSQLEQNSVLGEVLASGFRALNANPRISEDDLRSILEGAGRQAAHKLERYLAALATIASA HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH APLLGLLGTVIGMIEIFGAQAGAGGVSSSGGGNPVQMAQGISIALYNTAFGLMVAIPSLI HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHH FWRYFRAQVDGYLLTMELAAERFVRHLNTLRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA