Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is exbB [C]

Identifier: 91788807

GI number: 91788807

Start: 3109524

End: 3110162

Strand: Direct

Name: exbB [C]

Synonym: Bpro_2947

Alternate gene names: 91788807

Gene position: 3109524-3110162 (Clockwise)

Preceding gene: 91788804

Following gene: 91788808

Centisome position: 59.8

GC content: 62.44

Gene sequence:

>639_bases
TTGTTTTCGATCATACAAGCCGCAGGCTGGCCGATATGGCCTTTGCTTGCCTGCTCCGTCTTGGCGCTTGCGCTGGTCAT
TGAGCGTTTTACCAGCCTGAAAACCCCCAAGGTCGCGCCGCCAAGACTGCTTGACGAAGCCATCACGGTCTCCCGTTCCG
CCGTACCGGCGCCAGAGGTGGTGTCGCAACTGGAACAAAACTCGGTTCTTGGCGAGGTGCTGGCCAGCGGGTTTCGTGCC
CTGAACGCCAACCCGCGGATCAGCGAGGACGATTTGCGCTCCATCCTGGAGGGAGCCGGTCGCCAGGCAGCCCACAAGCT
GGAGCGTTACCTGGCCGCCCTGGCCACCATTGCCTCTGCTGCGCCCTTGCTGGGACTGCTGGGCACCGTCATCGGCATGA
TCGAGATTTTCGGCGCCCAAGCTGGTGCCGGCGGCGTCAGCAGTTCCGGCGGCGGTAACCCGGTGCAGATGGCGCAGGGT
ATCTCGATCGCCCTGTACAACACCGCATTCGGGCTGATGGTGGCCATACCATCCCTGATTTTCTGGCGCTATTTCCGGGC
CCAGGTTGACGGTTACCTGCTCACGATGGAGCTGGCTGCGGAGCGCTTCGTGCGCCACCTCAATACGCTGCGGAAATGA

Upstream 100 bases:

>100_bases
GGAACGCCATTTTTGAAACAGGTTTGCGGGCCACACATAAAACAGCGGCCCGGATTTGGTGGGCCATAATCCAGACAAAT
TATTTGCCTGGAGATGTGCA

Downstream 100 bases:

>100_bases
ATATGGCCCCCACGCTTGCCACTGCGTGTGCTGCGCTGCCCCCCGAGGGGGCTGAACTTGCTCGGGGCGGCCCTTCGCTG
CGTTCAATGGCCCCCACGCT

Product: MotA/TolQ/ExbB proton channel

Products: NA

Alternate protein names: MotA/lQ/ExbB Proton Channel Family Protein; ExbB-Like Biopolymer Transport; Biopolymer Transport ExbB-Like Transmembrane Protein; Biopolymer Transporter ExbB; Biopolymer Transport Protein ExbB; Biopolymer Transport Exbb Transmembrane Protein; MotA/lQ/ExbB Proton Channel Family Domain Protein; Transporter MotA/lQ/ExbB Proton Channel Family; Biopolymer Transport Channel Protein; Transporter MotA/lQ/ExbB Proton Channel Family Protein; Biopolymer Transporter; MotA/lQ/ExbB Proton Channel Family; Mota/lq/Exbb Proton Channel

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MFSIIQAAGWPIWPLLACSVLALALVIERFTSLKTPKVAPPRLLDEAITVSRSAVPAPEVVSQLEQNSVLGEVLASGFRA
LNANPRISEDDLRSILEGAGRQAAHKLERYLAALATIASAAPLLGLLGTVIGMIEIFGAQAGAGGVSSSGGGNPVQMAQG
ISIALYNTAFGLMVAIPSLIFWRYFRAQVDGYLLTMELAAERFVRHLNTLRK

Sequences:

>Translated_212_residues
MFSIIQAAGWPIWPLLACSVLALALVIERFTSLKTPKVAPPRLLDEAITVSRSAVPAPEVVSQLEQNSVLGEVLASGFRA
LNANPRISEDDLRSILEGAGRQAAHKLERYLAALATIASAAPLLGLLGTVIGMIEIFGAQAGAGGVSSSGGGNPVQMAQG
ISIALYNTAFGLMVAIPSLIFWRYFRAQVDGYLLTMELAAERFVRHLNTLRK
>Mature_212_residues
MFSIIQAAGWPIWPLLACSVLALALVIERFTSLKTPKVAPPRLLDEAITVSRSAVPAPEVVSQLEQNSVLGEVLASGFRA
LNANPRISEDDLRSILEGAGRQAAHKLERYLAALATIASAAPLLGLLGTVIGMIEIFGAQAGAGGVSSSGGGNPVQMAQG
ISIALYNTAFGLMVAIPSLIFWRYFRAQVDGYLLTMELAAERFVRHLNTLRK

Specific function: Involved In The Tonb-Dependent Energy-Dependent Transport Of Various Receptor-Bound Substrates. Protects Exbd From Proteolytic Degradation And Functionally Stabilizes Tonb. [C]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22541; Mature: 22541

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSIIQAAGWPIWPLLACSVLALALVIERFTSLKTPKVAPPRLLDEAITVSRSAVPAPEV
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHH
VSQLEQNSVLGEVLASGFRALNANPRISEDDLRSILEGAGRQAAHKLERYLAALATIASA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
APLLGLLGTVIGMIEIFGAQAGAGGVSSSGGGNPVQMAQGISIALYNTAFGLMVAIPSLI
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHH
FWRYFRAQVDGYLLTMELAAERFVRHLNTLRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFSIIQAAGWPIWPLLACSVLALALVIERFTSLKTPKVAPPRLLDEAITVSRSAVPAPEV
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHH
VSQLEQNSVLGEVLASGFRALNANPRISEDDLRSILEGAGRQAAHKLERYLAALATIASA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
APLLGLLGTVIGMIEIFGAQAGAGGVSSSGGGNPVQMAQGISIALYNTAFGLMVAIPSLI
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHH
FWRYFRAQVDGYLLTMELAAERFVRHLNTLRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA