| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is tauC [H]
Identifier: 91788795
GI number: 91788795
Start: 3096647
End: 3097405
Strand: Direct
Name: tauC [H]
Synonym: Bpro_2935
Alternate gene names: 91788795
Gene position: 3096647-3097405 (Clockwise)
Preceding gene: 91788794
Following gene: 91788796
Centisome position: 59.55
GC content: 61.79
Gene sequence:
>759_bases GTGGAAAAACTAAAAAACATCCTCGCGCCGCTGGCCGTGCTGGTGGCGTTGATCGCCTGCTGGTGGGTGATCGTGCTGCA GACCGAGAGCGTGATTTTCCCCACGCCGCTGCAGGTGGTGACCGGCACCATGGAGCTGGTCGCAGACGGCACGCTGTGGG AGCATATAGGCGCGTCGCTGTTTCGGGTGGGCACCGGCTTTTTGAGCGCCACCCTGGTCGCCTTGCCCATGGGGCTGTGG ATGGGCCGTGTGGAGGGCGCCTACCGCACGCTCAACCCGATCTTCCAGATCCTGCGGCCCATATCACCCATCGCCTGGAT TCCGCTGGCCATCCTGTGGTTTGGCGTGGGTAATGTCTCGCCGATTTTCCTGATTTTTATCGCGTCGGTCTTCCCGATGA TTGTGCAAACCGCTGCCGGCGTGCACACCATCGAAAGGCGCTATCTGCGGGCGGCCGACAATTTTGGCGTGTCGCGTTAC ACCCTGTTCCGCCAGGTCATCATTCCCGCCGTGCTGCCCGAAATCATCGTTGGCATGCGCATTGGCCTGGGCGTGGCGTG GCTGGTCGTGGTGGCGGCAGAAATGATCGCCCTGCGCTCCGGCCTGGGCTACCTCATCATGGACTCACGCAACGCGGGCA ACCGCTACGACCTGGTGATCGCCAGCATGGTCATCATTGGCGTCATCGGACTTTTGCTGGACGGCACGATGCGCCGCCTG GAAGGCCTCAAATCGATCAGGTGGCGCTATGGACGTTAA
Upstream 100 bases:
>100_bases GTTGTTCCCAAGCCGGAAACCGCCTGGGAGCGGCTGCAGTGGCGTGCGGCTACAGCGTATGCGGCGCTAAGAAACCAATT GTTGTAAGCGAAGGGATTTG
Downstream 100 bases:
>100_bases AGACGCCAAGATTTCAGTCAAGGACATTCGCAAGAGCTTTGCCCCGGGCAAGGCGTCGCTGCCGGTCGTCGATGGCGTCA GCCTGTCGGTTGCCGACGGT
Product: binding-protein-dependent transport systems inner membrane component
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MEKLKNILAPLAVLVALIACWWVIVLQTESVIFPTPLQVVTGTMELVADGTLWEHIGASLFRVGTGFLSATLVALPMGLW MGRVEGAYRTLNPIFQILRPISPIAWIPLAILWFGVGNVSPIFLIFIASVFPMIVQTAAGVHTIERRYLRAADNFGVSRY TLFRQVIIPAVLPEIIVGMRIGLGVAWLVVVAAEMIALRSGLGYLIMDSRNAGNRYDLVIASMVIIGVIGLLLDGTMRRL EGLKSIRWRYGR
Sequences:
>Translated_252_residues MEKLKNILAPLAVLVALIACWWVIVLQTESVIFPTPLQVVTGTMELVADGTLWEHIGASLFRVGTGFLSATLVALPMGLW MGRVEGAYRTLNPIFQILRPISPIAWIPLAILWFGVGNVSPIFLIFIASVFPMIVQTAAGVHTIERRYLRAADNFGVSRY TLFRQVIIPAVLPEIIVGMRIGLGVAWLVVVAAEMIALRSGLGYLIMDSRNAGNRYDLVIASMVIIGVIGLLLDGTMRRL EGLKSIRWRYGR >Mature_252_residues MEKLKNILAPLAVLVALIACWWVIVLQTESVIFPTPLQVVTGTMELVADGTLWEHIGASLFRVGTGFLSATLVALPMGLW MGRVEGAYRTLNPIFQILRPISPIAWIPLAILWFGVGNVSPIFLIFIASVFPMIVQTAAGVHTIERRYLRAADNFGVSRY TLFRQVIIPAVLPEIIVGMRIGLGVAWLVVVAAEMIALRSGLGYLIMDSRNAGNRYDLVIASMVIIGVIGLLLDGTMRRL EGLKSIRWRYGR
Specific function: Part of a binding-protein-dependent transport system for taurine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=246, Percent_Identity=36.5853658536585, Blast_Score=148, Evalue=3e-37, Organism=Escherichia coli, GI87081802, Length=218, Percent_Identity=37.1559633027523, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI1789033, Length=158, Percent_Identity=27.2151898734177, Blast_Score=64, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 27770; Mature: 27770
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLKNILAPLAVLVALIACWWVIVLQTESVIFPTPLQVVTGTMELVADGTLWEHIGASL CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHCCHHHHHHHHHH FRVGTGFLSATLVALPMGLWMGRVEGAYRTLNPIFQILRPISPIAWIPLAILWFGVGNVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCH PIFLIFIASVFPMIVQTAAGVHTIERRYLRAADNFGVSRYTLFRQVIIPAVLPEIIVGMR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH IGLGVAWLVVVAAEMIALRSGLGYLIMDSRNAGNRYDLVIASMVIIGVIGLLLDGTMRRL HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EGLKSIRWRYGR HHHHHHHHCCCC >Mature Secondary Structure MEKLKNILAPLAVLVALIACWWVIVLQTESVIFPTPLQVVTGTMELVADGTLWEHIGASL CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHCCHHHHHHHHHH FRVGTGFLSATLVALPMGLWMGRVEGAYRTLNPIFQILRPISPIAWIPLAILWFGVGNVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCH PIFLIFIASVFPMIVQTAAGVHTIERRYLRAADNFGVSRYTLFRQVIIPAVLPEIIVGMR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH IGLGVAWLVVVAAEMIALRSGLGYLIMDSRNAGNRYDLVIASMVIIGVIGLLLDGTMRRL HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EGLKSIRWRYGR HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503 [H]