Click here to switch to the map view.

The map label for this gene is 91788793

Identifier: 91788793

GI number: 91788793

Start: 3095582

End: 3096169

Strand: Direct

Name: 91788793

Synonym: Bpro_2933

Alternate gene names: NA

Gene position: 3095582-3096169 (Clockwise)

Preceding gene: 91788792

Following gene: 91788794

Centisome position: 59.53

GC content: 61.9

Gene sequence:

>588_bases
TTGAATCGCGCACTACCCGTCTTTTTTTCGCTGCTTCTTTTCGCCGCCACAGCTGGCGCGGCTGCCAGTTCGGGCCTGAA
GTCCGGCGTGTTCGAGCCGCCGCGCATGGCGCCGGACTTCAGCTTGCGCAGCACAGCCGGCACCGACCTGCAACTGAGCC
GCTACCGCGGCAAGCTGGTCATTCTTGAATTCGGCTACACCTCCTGCCCCAACGTTTGCCCGGAGTCGCTGGCGATGCTG
GCGCAGGCACGCCAGAAACTGGGCGCGCTTGCCAGTCAAGTGCAGGTGGTTTTCGTCACCGTCGATCCCGAACGGGACAC
GGCGGACCTCCTGCGCAAGTACCTGGCGGCTTTTGACTCCAGTTTTGTGGGCGTCACCGGCACGCCGGCCCAGATGGAGA
AGGTGCGCCAGGACTACGGCATCACCGCCACAAAAGAAATGGTCGAGGGCAGCAAGACCAACTACGCGGTGCACCACTCG
TCTTACCTCTATTTTGTGGACCGCCAGGGCAGCCTGCGCGGGCTGATGCCTTTCGGGCGCACTGCCGACGACATCGTGCA
TGACGCCAGAATTTTGCTCAAGAAATAA

Upstream 100 bases:

>100_bases
GCACCATCAAGCGCCCGGTCGCTTACGAATCCTATGTGGACGAGAGTTTTGTCAAAAACATCAAGCCCGTCACCATCACA
CTCTGACTTCAGGACACCCC

Downstream 100 bases:

>100_bases
GCGTGCCAAGACAGGTGAAGTCCCTGCGCCGCGTCTGGCCCCTGCTGCTGTTGATGCTTGCCGCCTGCACGCTGGGCGCA
TTCGGATGGGCCGCGCTCGC

Product: electron transport protein SCO1/SenC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MNRALPVFFSLLLFAATAGAAASSGLKSGVFEPPRMAPDFSLRSTAGTDLQLSRYRGKLVILEFGYTSCPNVCPESLAML
AQARQKLGALASQVQVVFVTVDPERDTADLLRKYLAAFDSSFVGVTGTPAQMEKVRQDYGITATKEMVEGSKTNYAVHHS
SYLYFVDRQGSLRGLMPFGRTADDIVHDARILLKK

Sequences:

>Translated_195_residues
MNRALPVFFSLLLFAATAGAAASSGLKSGVFEPPRMAPDFSLRSTAGTDLQLSRYRGKLVILEFGYTSCPNVCPESLAML
AQARQKLGALASQVQVVFVTVDPERDTADLLRKYLAAFDSSFVGVTGTPAQMEKVRQDYGITATKEMVEGSKTNYAVHHS
SYLYFVDRQGSLRGLMPFGRTADDIVHDARILLKK
>Mature_195_residues
MNRALPVFFSLLLFAATAGAAASSGLKSGVFEPPRMAPDFSLRSTAGTDLQLSRYRGKLVILEFGYTSCPNVCPESLAML
AQARQKLGALASQVQVVFVTVDPERDTADLLRKYLAAFDSSFVGVTGTPAQMEKVRQDYGITATKEMVEGSKTNYAVHHS
SYLYFVDRQGSLRGLMPFGRTADDIVHDARILLKK

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SCO1/2 family [H]

Homologues:

Organism=Homo sapiens, GI281182727, Length=154, Percent_Identity=30.5194805194805, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI281182722, Length=154, Percent_Identity=30.5194805194805, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI281182716, Length=154, Percent_Identity=30.5194805194805, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI153791313, Length=154, Percent_Identity=30.5194805194805, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI4759068, Length=141, Percent_Identity=27.6595744680851, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17531419, Length=160, Percent_Identity=27.5, Blast_Score=85, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6319498, Length=146, Percent_Identity=31.5068493150685, Blast_Score=89, Evalue=4e-19,
Organism=Saccharomyces cerevisiae, GI6319511, Length=155, Percent_Identity=29.0322580645161, Blast_Score=80, Evalue=1e-16,
Organism=Drosophila melanogaster, GI19920710, Length=149, Percent_Identity=28.1879194630872, Blast_Score=78, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003782
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02630 SCO1-SenC [H]

EC number: NA

Molecular weight: Translated: 21277; Mature: 21277

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRALPVFFSLLLFAATAGAAASSGLKSGVFEPPRMAPDFSLRSTAGTDLQLSRYRGKLV
CCCCHHHHHHHHHHHHHCCHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEE
ILEFGYTSCPNVCPESLAMLAQARQKLGALASQVQVVFVTVDPERDTADLLRKYLAAFDS
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCHHHHHHHHHHHHCC
SFVGVTGTPAQMEKVRQDYGITATKEMVEGSKTNYAVHHSSYLYFVDRQGSLRGLMPFGR
CCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEECEEEEEEECCCCCCCCCCCCC
TADDIVHDARILLKK
CHHHHHHHHHHHHCC
>Mature Secondary Structure
MNRALPVFFSLLLFAATAGAAASSGLKSGVFEPPRMAPDFSLRSTAGTDLQLSRYRGKLV
CCCCHHHHHHHHHHHHHCCHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEE
ILEFGYTSCPNVCPESLAMLAQARQKLGALASQVQVVFVTVDPERDTADLLRKYLAAFDS
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCHHHHHHHHHHHHCC
SFVGVTGTPAQMEKVRQDYGITATKEMVEGSKTNYAVHHSSYLYFVDRQGSLRGLMPFGR
CCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEECEEEEEEECCCCCCCCCCCCC
TADDIVHDARILLKK
CHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]