| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788784
Identifier: 91788784
GI number: 91788784
Start: 3086972
End: 3087724
Strand: Direct
Name: 91788784
Synonym: Bpro_2924
Alternate gene names: NA
Gene position: 3086972-3087724 (Clockwise)
Preceding gene: 91788783
Following gene: 91788785
Centisome position: 59.36
GC content: 63.35
Gene sequence:
>753_bases ATGAAAATCGTCATCATCGGAGGCAGCGGCCTCATCGGCAAGAAACTTGCGGCCTTGCTTCAGCAGGCCGGGCATGAGGT GGCTGCGGCATCGCCGTCGTCGGGCGTCAACGCGGTGACCGGAGAAGGACTCTCTCAGGCGCTGGCCGGCGCTAAGGTCG TGGTTGACGTGACGAACTCGCCGTCGTTCGAAGACGAGGCCGTGATGAATTTCTTCAAGTCGTCGACCCAGAACCTGCTC GCCGCCGAACTCACCGCGGGCGTGCGCCATCATGTGGCGCTGTCAGTTGTGGGGTCTGAGCGCGTGCCCGAAAGCGGCTA CTTCCGCGCCAAGGTGGCCCAGGAGTCAATCATCAAGGGCTCCACGGTGCCGTACACGATTGTCCGGGCCACCCAATTTT TCGAGTTCCTGGCATCCATTGCCTATGTGAGCACCCAGGGCCAGACGGTGCGTGCGTCGTCGGCCCGGTTGCAGCCGATC GCGGCTGATGACGTCGCTGCCGCGCTTGCGAAGGTTGCCACCGAGGCACCGCTGAACGACACCTGTGAAGTCGCAGGGCC CCAGTCATTCCGTCTCGACGAACTGCTGCGACGCACCTTGCAAGCCAGCAAGGACCCGCGGGAAGTCGTCAAGGATGACG ACGCGCTGTATTTTGGAACGCGCCTCGATGACAAGTCCCTAACGCCCGGCGCCCATGCGCGGATCGGCACGACCTCGCTG GAAAGCTGGCTGGCAAACGCGGCCGCCAAATAG
Upstream 100 bases:
>100_bases CCCGCGTTGTCACAACCGACCATCGTCAAACGTCTTGTGTTGTATGGATGGTTGCAGGGTGTCGCCGTCTTTAATTCTCC CTATTTAATGAAGGACTGAC
Downstream 100 bases:
>100_bases ATCGGCATCTTCCCGGCGAGAGAAGCCAGCCGCTAAGTTCAACTCCTTCCAAAAATGACCCAACAAGGCAAACCCCATGA CAAGCTGCTGGCTCATGAAA
Product: NmrA-like protein
Products: NA
Alternate protein names: NAD-Dependent Epimerase/Dehydratase; Secreted Protein; DTDP-4-Dehydrorhamnose Reductase; Nucleoside-Diphosphate-Sugar Epimerase; Nucleoside-Diphosphate Sugar Epimerase; NmrA-Like; GCN5-Related N-Acetyltransferase; Transcriptional Regulator LysR-Family; LysR Family Transcriptional Regulator; NmrA-Like Protein; NAD Dependent Epimerase/Dehydratase Family; Nucleotide-Diphosphate-Sugar Epimerase/NmrA Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MKIVIIGGSGLIGKKLAALLQQAGHEVAAASPSSGVNAVTGEGLSQALAGAKVVVDVTNSPSFEDEAVMNFFKSSTQNLL AAELTAGVRHHVALSVVGSERVPESGYFRAKVAQESIIKGSTVPYTIVRATQFFEFLASIAYVSTQGQTVRASSARLQPI AADDVAAALAKVATEAPLNDTCEVAGPQSFRLDELLRRTLQASKDPREVVKDDDALYFGTRLDDKSLTPGAHARIGTTSL ESWLANAAAK
Sequences:
>Translated_250_residues MKIVIIGGSGLIGKKLAALLQQAGHEVAAASPSSGVNAVTGEGLSQALAGAKVVVDVTNSPSFEDEAVMNFFKSSTQNLL AAELTAGVRHHVALSVVGSERVPESGYFRAKVAQESIIKGSTVPYTIVRATQFFEFLASIAYVSTQGQTVRASSARLQPI AADDVAAALAKVATEAPLNDTCEVAGPQSFRLDELLRRTLQASKDPREVVKDDDALYFGTRLDDKSLTPGAHARIGTTSL ESWLANAAAK >Mature_250_residues MKIVIIGGSGLIGKKLAALLQQAGHEVAAASPSSGVNAVTGEGLSQALAGAKVVVDVTNSPSFEDEAVMNFFKSSTQNLL AAELTAGVRHHVALSVVGSERVPESGYFRAKVAQESIIKGSTVPYTIVRATQFFEFLASIAYVSTQGQTVRASSARLQPI AADDVAAALAKVATEAPLNDTCEVAGPQSFRLDELLRRTLQASKDPREVVKDDDALYFGTRLDDKSLTPGAHARIGTTSL ESWLANAAAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26198; Mature: 26198
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVIIGGSGLIGKKLAALLQQAGHEVAAASPSSGVNAVTGEGLSQALAGAKVVVDVTNS CEEEEECCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHHCCCEEEEEECCC PSFEDEAVMNFFKSSTQNLLAAELTAGVRHHVALSVVGSERVPESGYFRAKVAQESIIKG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHCC STVPYTIVRATQFFEFLASIAYVSTQGQTVRASSARLQPIAADDVAAALAKVATEAPLND CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCC TCEVAGPQSFRLDELLRRTLQASKDPREVVKDDDALYFGTRLDDKSLTPGAHARIGTTSL CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCHHHH ESWLANAAAK HHHHHHHCCC >Mature Secondary Structure MKIVIIGGSGLIGKKLAALLQQAGHEVAAASPSSGVNAVTGEGLSQALAGAKVVVDVTNS CEEEEECCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHHCCCEEEEEECCC PSFEDEAVMNFFKSSTQNLLAAELTAGVRHHVALSVVGSERVPESGYFRAKVAQESIIKG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHCC STVPYTIVRATQFFEFLASIAYVSTQGQTVRASSARLQPIAADDVAAALAKVATEAPLND CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCC TCEVAGPQSFRLDELLRRTLQASKDPREVVKDDDALYFGTRLDDKSLTPGAHARIGTTSL CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCHHHH ESWLANAAAK HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA