Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788710

Identifier: 91788710

GI number: 91788710

Start: 3002441

End: 3003463

Strand: Direct

Name: 91788710

Synonym: Bpro_2849

Alternate gene names: NA

Gene position: 3002441-3003463 (Clockwise)

Preceding gene: 91788709

Following gene: 91788715

Centisome position: 57.74

GC content: 61.09

Gene sequence:

>1023_bases
ATGGGCAGCCTATGGAGTGCGGACAACAGGGGCAAGGTCAGGAGGCTTGCTTTGAGCTCGACTACTCTCGATGCCAACTG
CACAGATGGCAACGCCGGCGAGCATGGCGCCAATGAGCTTGAGGTTAGCGTTCACGTGTTTTCCTTTGGTTCGTTGGAGG
TAGGGAGTACCGCGAACGCCGACTGTTTCGACGTGCCGGTGCTTGGCAGTGTGCCTGAAGGCACGTACTTATGCTGTGTG
ACGCCTAACGTCGTGATCAACAAGCCCGGCGCCGCCAGCGCGATCGGCTTCGGCGATGTGGCCAATGCAAAACCTGACGG
CTACAAGGTCGCCGTAGTCAGCGTCAACCTGGTGATCCTGCCGGCGCTGAACCTCATGAAGCTGACCAGCGATGATTTCA
TTCCGATCGCTCGCCTGAACTACGACCCCTCGGCGATCACGGTGCGGGCCGATGCTCCCTGGAAGACGATTGAGGAATTC
ATTGCCGACGCCAAAAAGCGGCCGGGCGCGATGCAGGTTGGCAACGGCGGTGTCGGCGACATCTGGCATGTGGCAGCCGC
CGCTTTTGAGGACCGAACCGGCACCCAGTTCAATCATGTGCCGTTCCAGGGCGCGTCGCCGGCCATTCTCAGCCTGCTGG
GTGGCCACGTGGACGCCGTCTCCGTCAGCCCCGGCGAGGTGATGTCGCACGTGCAGAGCGGCAAATTGCGCACGCTGGCG
GTGATGTCCGAACAGCGGCTGGGCGGCGTGTTTGCCGATTCGCCGACGCTCAAGGAAAGGAAGATCGACCTCACCATCGG
CGTGTGGCGTGGTCTTGCCGTGCCCAAAAATACGCCGCCAGACGTGGTGGATGTGTTGAAGAATGCAGCGCGCAGCACGG
CGAGCGACGCGGCTTACAAAGAGACGCTGGTCAAGGCCAACCTGGGTGAGGCTTATCTCGATGCAGCGCCCTTCAAGGCA
TCGATCGAGAGGGACCGCGAGTCACTGAAGAAGGTGCTGGCGAAGCTGGTCATCCAGAAGTAA

Upstream 100 bases:

>100_bases
ACAACCACAAAAGATTGCACTCGACGCTGGGCTATGTCAGCCCGATGACGTTTGAGCAACGCTGGATCGCGGCCCAGCAG
CAAGAAAGAAAGTCCGCATA

Downstream 100 bases:

>100_bases
ACGCGACACAAGCGCTTGTCAGGAGCGCACCGTATCGGCCACACGCTCGGCACAGGCCTTGGCCTGCCGGGCGTCGCGCG
CTTCAACCATCACCCTTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF7 [H]

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MGSLWSADNRGKVRRLALSSTTLDANCTDGNAGEHGANELEVSVHVFSFGSLEVGSTANADCFDVPVLGSVPEGTYLCCV
TPNVVINKPGAASAIGFGDVANAKPDGYKVAVVSVNLVILPALNLMKLTSDDFIPIARLNYDPSAITVRADAPWKTIEEF
IADAKKRPGAMQVGNGGVGDIWHVAAAAFEDRTGTQFNHVPFQGASPAILSLLGGHVDAVSVSPGEVMSHVQSGKLRTLA
VMSEQRLGGVFADSPTLKERKIDLTIGVWRGLAVPKNTPPDVVDVLKNAARSTASDAAYKETLVKANLGEAYLDAAPFKA
SIERDRESLKKVLAKLVIQK

Sequences:

>Translated_340_residues
MGSLWSADNRGKVRRLALSSTTLDANCTDGNAGEHGANELEVSVHVFSFGSLEVGSTANADCFDVPVLGSVPEGTYLCCV
TPNVVINKPGAASAIGFGDVANAKPDGYKVAVVSVNLVILPALNLMKLTSDDFIPIARLNYDPSAITVRADAPWKTIEEF
IADAKKRPGAMQVGNGGVGDIWHVAAAAFEDRTGTQFNHVPFQGASPAILSLLGGHVDAVSVSPGEVMSHVQSGKLRTLA
VMSEQRLGGVFADSPTLKERKIDLTIGVWRGLAVPKNTPPDVVDVLKNAARSTASDAAYKETLVKANLGEAYLDAAPFKA
SIERDRESLKKVLAKLVIQK
>Mature_339_residues
GSLWSADNRGKVRRLALSSTTLDANCTDGNAGEHGANELEVSVHVFSFGSLEVGSTANADCFDVPVLGSVPEGTYLCCVT
PNVVINKPGAASAIGFGDVANAKPDGYKVAVVSVNLVILPALNLMKLTSDDFIPIARLNYDPSAITVRADAPWKTIEEFI
ADAKKRPGAMQVGNGGVGDIWHVAAAAFEDRTGTQFNHVPFQGASPAILSLLGGHVDAVSVSPGEVMSHVQSGKLRTLAV
MSEQRLGGVFADSPTLKERKIDLTIGVWRGLAVPKNTPPDVVDVLKNAARSTASDAAYKETLVKANLGEAYLDAAPFKAS
IERDRESLKKVLAKLVIQK

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064
- InterPro:   IPR006311 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 35833; Mature: 35702

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSLWSADNRGKVRRLALSSTTLDANCTDGNAGEHGANELEVSVHVFSFGSLEVGSTANA
CCCCCCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCCEEEEEEEEEEECCEEECCCCCC
DCFDVPVLGSVPEGTYLCCVTPNVVINKPGAASAIGFGDVANAKPDGYKVAVVSVNLVIL
CEECCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEE
PALNLMKLTSDDFIPIARLNYDPSAITVRADAPWKTIEEFIADAKKRPGAMQVGNGGVGD
CCCHHEEECCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCCCH
IWHVAAAAFEDRTGTQFNHVPFQGASPAILSLLGGHVDAVSVSPGEVMSHVQSGKLRTLA
HHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHCCCCEEEECCHHHHHHHHHCCCEEEEE
VMSEQRLGGVFADSPTLKERKIDLTIGVWRGLAVPKNTPPDVVDVLKNAARSTASDAAYK
EEHHHHCCCEECCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHH
ETLVKANLGEAYLDAAPFKASIERDRESLKKVLAKLVIQK
HHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GSLWSADNRGKVRRLALSSTTLDANCTDGNAGEHGANELEVSVHVFSFGSLEVGSTANA
CCCCCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCCEEEEEEEEEEECCEEECCCCCC
DCFDVPVLGSVPEGTYLCCVTPNVVINKPGAASAIGFGDVANAKPDGYKVAVVSVNLVIL
CEECCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEE
PALNLMKLTSDDFIPIARLNYDPSAITVRADAPWKTIEEFIADAKKRPGAMQVGNGGVGD
CCCHHEEECCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCCCH
IWHVAAAAFEDRTGTQFNHVPFQGASPAILSLLGGHVDAVSVSPGEVMSHVQSGKLRTLA
HHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHCCCCEEEECCHHHHHHHHHCCCEEEEE
VMSEQRLGGVFADSPTLKERKIDLTIGVWRGLAVPKNTPPDVVDVLKNAARSTASDAAYK
EEHHHHCCCEECCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHH
ETLVKANLGEAYLDAAPFKASIERDRESLKKVLAKLVIQK
HHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7851418 [H]