Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788704

Identifier: 91788704

GI number: 91788704

Start: 2996660

End: 2997604

Strand: Direct

Name: 91788704

Synonym: Bpro_2843

Alternate gene names: NA

Gene position: 2996660-2997604 (Clockwise)

Preceding gene: 91788703

Following gene: 91788705

Centisome position: 57.63

GC content: 62.43

Gene sequence:

>945_bases
ATGAACCCCTCGCCCGCATCCAGAAATGTCATCTCCGTTGTGGACGCCCACCATCATCTGTGGGACTTGTCGCTGGGCCG
CTATCCCTGGTTGCAGCAGGCGTATGACCCAAAGACCTTCTTTCTGGGCGACTATGCCGCGTTGCGCCAGGACTTTTTGC
CAAAGGACTACCGCGCCGCCAGCGCTGGTGTTCAGGTGCTGGCGACGGTGCACGTAGAGGCCGAACGCGACCGCAGCGAG
CAGGTGGCAGAAACCGCCTGGCTGCATGACATGAACGCCGCGCACGGCATCCCTAACGCGGTGGTGGCGCATGCCTGGTT
CGACCGGCCAGATACGGAAGAGTACCTGCTCAGCCATTTGCGCTATCCACTGGTGCGAGGTATTCGCAGCAAGCCTGTGA
CTTCTGCAACGCCAGCGCAAAGCGTGGCCGGGCAACCGGGCTCCATGCAGGACGAAGCCTGGTTGCGCGGCTTCTCACTG
CTGCGAAAACACGGTCTGAGCTGGGACCTGCGGGTACCGGCCTGGCATTTGCCCGAGGCTGCGCAGGTGGCGCAGATGTT
CCCGGATGTGCCCATGGTGCTCAATCACCACGGCTTTGCCTGGGACCGCAGCGAGGAAGGCCTCAAGCGCTGGCGTGGCT
GGATGGAAGTGCTGGCACGACAGCCCAACGTGCATGTGAAGCTGTCCGAATTCGGCCTGCGCGACCAGCCCTGGAATGAA
CAGTCCAATGCACGCATAGTGCGCGACACGCTGGCCATCTTCGGCTGGGAGCGCTGCATGTTCGCCAGCAACTTTCCGGT
GGCCAGCTTGCGCATCGGATTTCGACCCCTGGTAGAGGCTGTGTGGCGCATGCTGGACAAGCTCGCACCCGATCAGCGCC
AGGCCGTGATGAGCGGTAACGCGCTGCGCTTTTACCGTATCAATCTTCCACCTGCCCAGACCTGA

Upstream 100 bases:

>100_bases
GAGTTCGAACAGGAGATCAAGACCCTGCGCGAACCGGATTCTTCCTACGTGTGGCAACACTGACGTTCGCCCCACCTCAT
AAAGAAGCCGGGTACCCCCA

Downstream 100 bases:

>100_bases
CTCCATGAACAACTTCAACAACCTCATCAATGGCCAATGGTTGGCCGGCAACAGCACCAGCGCCAACCGGAACCCATCCA
ACCTCGCTGACGTCATCGGC

Product: amidohydrolase 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MNPSPASRNVISVVDAHHHLWDLSLGRYPWLQQAYDPKTFFLGDYAALRQDFLPKDYRAASAGVQVLATVHVEAERDRSE
QVAETAWLHDMNAAHGIPNAVVAHAWFDRPDTEEYLLSHLRYPLVRGIRSKPVTSATPAQSVAGQPGSMQDEAWLRGFSL
LRKHGLSWDLRVPAWHLPEAAQVAQMFPDVPMVLNHHGFAWDRSEEGLKRWRGWMEVLARQPNVHVKLSEFGLRDQPWNE
QSNARIVRDTLAIFGWERCMFASNFPVASLRIGFRPLVEAVWRMLDKLAPDQRQAVMSGNALRFYRINLPPAQT

Sequences:

>Translated_314_residues
MNPSPASRNVISVVDAHHHLWDLSLGRYPWLQQAYDPKTFFLGDYAALRQDFLPKDYRAASAGVQVLATVHVEAERDRSE
QVAETAWLHDMNAAHGIPNAVVAHAWFDRPDTEEYLLSHLRYPLVRGIRSKPVTSATPAQSVAGQPGSMQDEAWLRGFSL
LRKHGLSWDLRVPAWHLPEAAQVAQMFPDVPMVLNHHGFAWDRSEEGLKRWRGWMEVLARQPNVHVKLSEFGLRDQPWNE
QSNARIVRDTLAIFGWERCMFASNFPVASLRIGFRPLVEAVWRMLDKLAPDQRQAVMSGNALRFYRINLPPAQT
>Mature_314_residues
MNPSPASRNVISVVDAHHHLWDLSLGRYPWLQQAYDPKTFFLGDYAALRQDFLPKDYRAASAGVQVLATVHVEAERDRSE
QVAETAWLHDMNAAHGIPNAVVAHAWFDRPDTEEYLLSHLRYPLVRGIRSKPVTSATPAQSVAGQPGSMQDEAWLRGFSL
LRKHGLSWDLRVPAWHLPEAAQVAQMFPDVPMVLNHHGFAWDRSEEGLKRWRGWMEVLARQPNVHVKLSEFGLRDQPWNE
QSNARIVRDTLAIFGWERCMFASNFPVASLRIGFRPLVEAVWRMLDKLAPDQRQAVMSGNALRFYRINLPPAQT

Specific function: Unknown

COG id: COG3618

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006992 [H]

Pfam domain/function: PF04909 Amidohydro_2 [H]

EC number: NA

Molecular weight: Translated: 35839; Mature: 35839

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPSPASRNVISVVDAHHHLWDLSLGRYPWLQQAYDPKTFFLGDYAALRQDFLPKDYRAA
CCCCCCCCCHHHHHHHHHHHEECCCCCCCCHHHHCCCCEEEECCHHHHHHHCCCCHHHHH
SAGVQVLATVHVEAERDRSEQVAETAWLHDMNAAHGIPNAVVAHAWFDRPDTEEYLLSHL
HHCEEEEEEEEEEHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHCCCCCHHHHHHHHH
RYPLVRGIRSKPVTSATPAQSVAGQPGSMQDEAWLRGFSLLRKHGLSWDLRVPAWHLPEA
HHHHHHCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHH
AQVAQMFPDVPMVLNHHGFAWDRSEEGLKRWRGWMEVLARQPNVHVKLSEFGLRDQPWNE
HHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCC
QSNARIVRDTLAIFGWERCMFASNFPVASLRIGFRPLVEAVWRMLDKLAPDQRQAVMSGN
CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHCCC
ALRFYRINLPPAQT
CEEEEEECCCCCCC
>Mature Secondary Structure
MNPSPASRNVISVVDAHHHLWDLSLGRYPWLQQAYDPKTFFLGDYAALRQDFLPKDYRAA
CCCCCCCCCHHHHHHHHHHHEECCCCCCCCHHHHCCCCEEEECCHHHHHHHCCCCHHHHH
SAGVQVLATVHVEAERDRSEQVAETAWLHDMNAAHGIPNAVVAHAWFDRPDTEEYLLSHL
HHCEEEEEEEEEEHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHCCCCCHHHHHHHHH
RYPLVRGIRSKPVTSATPAQSVAGQPGSMQDEAWLRGFSLLRKHGLSWDLRVPAWHLPEA
HHHHHHCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHH
AQVAQMFPDVPMVLNHHGFAWDRSEEGLKRWRGWMEVLARQPNVHVKLSEFGLRDQPWNE
HHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCC
QSNARIVRDTLAIFGWERCMFASNFPVASLRIGFRPLVEAVWRMLDKLAPDQRQAVMSGN
CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHCCC
ALRFYRINLPPAQT
CEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]