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The map label for this gene is dapA [H]

Identifier: 91788698

GI number: 91788698

Start: 2990855

End: 2991772

Strand: Direct

Name: dapA [H]

Synonym: Bpro_2837

Alternate gene names: 91788698

Gene position: 2990855-2991772 (Clockwise)

Preceding gene: 91788697

Following gene: 91788699

Centisome position: 57.51

GC content: 62.53

Gene sequence:

>918_bases
ATGGCAGCCAGGTTCAAGGGCGTATTTCCGGTGGTGCCCACCACCTTCAACGATGCGGGCGAGCTGGACCTCGAAAGCCA
GAAGCGCTGCATCGACTTCATGATTGACGCGGGCTCGAACGGCCTGTGCATTCTGGCGAATTTTTCCGAGCAGTTTTTGC
TGTCGGATGACGAGCGCGAAACGCTCACGCAAACCATCCTCAAGCACGTCGCGGGCCGGGTGCCGGTGATTGTGACCACC
ACGCACTTTGGCACGCGGGTATGCGCCGAGCGCAGCCGCCGCGCACAGGATGCCGGCGCCGCCATGGTGATGGTCATGCC
GCCGTATCACGGCGCCACACTGAGAGCGAGCGAGGAGAAGATTTACGAGTTCTACGCCGCGCTATCCAACGCCATCGACA
TCCCGATCATGATCCAGGATGCCCCCATGAGCGGCACGACGCTGTCTGCAGCCTTTCTGGCACGCATGGCCAAGGAAATC
AAGCAGGTCTCCTATTTCAAGATTGAAACTGCCGGCGCAGCATCCAAGCTGCGCGAGCTGATTCGCCTCGGCGGCGATGC
CATTGAAGGCCCCTGGGATGGCGAAGAAGCCATCACGCTGCTGCCCGACATGGATGCCGGTGCGACAGGCGCCATGACTG
GCGGGGGCTACCCCGACGGCATACGCCGCATTGTTGATGCCTATGCCGCAGGCCGCCGTGAAGAGGCGATCGCGCAATAC
ACACGCTGGCTGCCGCTGATCAACTACGAAAACCGCCAGGGCGGCATCCTGACGGCCAAGGCGCTGATGAAGGCCGGTGG
CGTCATCGCCTGCGAAGCCCCGCGCCATCCGTTTCCCGCCATGCACCCCGAGGTACGCAAAGGCCTGATCGAAACCGCCC
GGCGGCTTGATCCCTTGGTCTTGCGCTGGGGTAAGTAA

Upstream 100 bases:

>100_bases
CAGAAAACGGCTTCCTGCAGCTTGACGACAACAAGCCCGGCCTGGGCCTGACGCTCAAGACCGAGTTCCTCGAAGACTTC
AACATCATTGAGTGAGCACC

Downstream 100 bases:

>100_bases
TTTTCTCGTTAGCTCCTTAAAAAATTCCAGATATATATATAGAGAGACAAATCATGAAAACCCGTTCCTTTCTCAAACTC
GCCCTGTCTGTGGCTGTGCT

Product: 2-dehydro-3-deoxy-L-arabinonate dehydratase

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MAARFKGVFPVVPTTFNDAGELDLESQKRCIDFMIDAGSNGLCILANFSEQFLLSDDERETLTQTILKHVAGRVPVIVTT
THFGTRVCAERSRRAQDAGAAMVMVMPPYHGATLRASEEKIYEFYAALSNAIDIPIMIQDAPMSGTTLSAAFLARMAKEI
KQVSYFKIETAGAASKLRELIRLGGDAIEGPWDGEEAITLLPDMDAGATGAMTGGGYPDGIRRIVDAYAAGRREEAIAQY
TRWLPLINYENRQGGILTAKALMKAGGVIACEAPRHPFPAMHPEVRKGLIETARRLDPLVLRWGK

Sequences:

>Translated_305_residues
MAARFKGVFPVVPTTFNDAGELDLESQKRCIDFMIDAGSNGLCILANFSEQFLLSDDERETLTQTILKHVAGRVPVIVTT
THFGTRVCAERSRRAQDAGAAMVMVMPPYHGATLRASEEKIYEFYAALSNAIDIPIMIQDAPMSGTTLSAAFLARMAKEI
KQVSYFKIETAGAASKLRELIRLGGDAIEGPWDGEEAITLLPDMDAGATGAMTGGGYPDGIRRIVDAYAAGRREEAIAQY
TRWLPLINYENRQGGILTAKALMKAGGVIACEAPRHPFPAMHPEVRKGLIETARRLDPLVLRWGK
>Mature_304_residues
AARFKGVFPVVPTTFNDAGELDLESQKRCIDFMIDAGSNGLCILANFSEQFLLSDDERETLTQTILKHVAGRVPVIVTTT
HFGTRVCAERSRRAQDAGAAMVMVMPPYHGATLRASEEKIYEFYAALSNAIDIPIMIQDAPMSGTTLSAAFLARMAKEIK
QVSYFKIETAGAASKLRELIRLGGDAIEGPWDGEEAITLLPDMDAGATGAMTGGGYPDGIRRIVDAYAAGRREEAIAQYT
RWLPLINYENRQGGILTAKALMKAGGVIACEAPRHPFPAMHPEVRKGLIETARRLDPLVLRWGK

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Escherichia coli, GI1786463, Length=182, Percent_Identity=29.6703296703297, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI87082415, Length=180, Percent_Identity=24.4444444444444, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1788823, Length=287, Percent_Identity=24.0418118466899, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 33260; Mature: 33129

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARFKGVFPVVPTTFNDAGELDLESQKRCIDFMIDAGSNGLCILANFSEQFLLSDDERE
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCEEEEECCCCCEECCCCHHH
TLTQTILKHVAGRVPVIVTTTHFGTRVCAERSRRAQDAGAAMVMVMPPYHGATLRASEEK
HHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEECHHHH
IYEFYAALSNAIDIPIMIQDAPMSGTTLSAAFLARMAKEIKQVSYFKIETAGAASKLREL
HHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHH
IRLGGDAIEGPWDGEEAITLLPDMDAGATGAMTGGGYPDGIRRIVDAYAAGRREEAIAQY
HHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
TRWLPLINYENRQGGILTAKALMKAGGVIACEAPRHPFPAMHPEVRKGLIETARRLDPLV
HHHCCCEECCCCCCCEEHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHE
LRWGK
EECCC
>Mature Secondary Structure 
AARFKGVFPVVPTTFNDAGELDLESQKRCIDFMIDAGSNGLCILANFSEQFLLSDDERE
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCEEEEECCCCCEECCCCHHH
TLTQTILKHVAGRVPVIVTTTHFGTRVCAERSRRAQDAGAAMVMVMPPYHGATLRASEEK
HHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEECHHHH
IYEFYAALSNAIDIPIMIQDAPMSGTTLSAAFLARMAKEIKQVSYFKIETAGAASKLREL
HHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHH
IRLGGDAIEGPWDGEEAITLLPDMDAGATGAMTGGGYPDGIRRIVDAYAAGRREEAIAQY
HHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
TRWLPLINYENRQGGILTAKALMKAGGVIACEAPRHPFPAMHPEVRKGLIETARRLDPLV
HHHCCCEECCCCCCCEEHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHE
LRWGK
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA