| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is cobP [H]
Identifier: 91788645
GI number: 91788645
Start: 2924140
End: 2924739
Strand: Reverse
Name: cobP [H]
Synonym: Bpro_2783
Alternate gene names: 91788645
Gene position: 2924739-2924140 (Counterclockwise)
Preceding gene: 91788646
Following gene: 91788644
Centisome position: 56.24
GC content: 63.83
Gene sequence:
>600_bases ATGACGAACATGTCGGTGGTCCGCAGTGAACTGATTCTGGGTGGCCAGAGAAGCGGCAAGTCGCGCCGCGCAGAAAGGCT CGCGCAAGCCTGGCTGGCTGATTCGCCGGACCATGGCGCCGTGTTCATCGCCACCGCGCAGGCCTGGGATGACGAGATGC GCGAACGCATTGCATGCCACCAGCGGGACCGGGCCGAACGCCTGCCCGGCATGGTCACTGTGGAGGAGCCGCTGCACCTT GCGCAGGCCATCGCGCAGCACAGCCGCAGCAGCACCCTGGTCGTGGTTGACTGCCTGACCCTGTGGCTGACCAATCGCTT GATGCCGGCGGAAAGGCCAGCTGAAAATTCACGGCCAAAAGAAACTCCAGCCCATGATTTATCCGGGGATATAGCCGTGA TTTCGGGCGCGATCCATGGGGCTGCCGGTCCCGTGGTGCTGGTCAGCAATGAAATCGGGCTGGGCGTGATTCCGATGGGC CGTGAGACGCGCGCTTTTGTCGATGCGCTGGGTTGGCTCAACCAGGACGTGGCTGGCGCCTGCGAACGCGTGACGCTGAT GGCAGCCGGTTTGCCGCTCACCCTGAAAGGTTCGCCGTGA
Upstream 100 bases:
>100_bases ATGGCGTGGAGCAATTGCACCGGATCATCATGGCCTGGAGCCGGACCGTGGGCGCTACGGCCGACACGGGCGGGTCGTCC TTGCCCCCCGAAAGCACGCC
Downstream 100 bases:
>100_bases AGCGCATCGCCGGTTGGCTGGTTTTGCTGTGCCTGGTGCTGGCGGCGCCGGTCCGCGCCTTGCCCTTGCAATTGACTGAT GACCGCGGCGTGACCCTCAC
Product: adenosylcobinamide kinase
Products: NA
Alternate protein names: Adenosylcobinamide kinase; Adenosylcobinamide-phosphate guanylyltransferase [H]
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MTNMSVVRSELILGGQRSGKSRRAERLAQAWLADSPDHGAVFIATAQAWDDEMRERIACHQRDRAERLPGMVTVEEPLHL AQAIAQHSRSSTLVVVDCLTLWLTNRLMPAERPAENSRPKETPAHDLSGDIAVISGAIHGAAGPVVLVSNEIGLGVIPMG RETRAFVDALGWLNQDVAGACERVTLMAAGLPLTLKGSP
Sequences:
>Translated_199_residues MTNMSVVRSELILGGQRSGKSRRAERLAQAWLADSPDHGAVFIATAQAWDDEMRERIACHQRDRAERLPGMVTVEEPLHL AQAIAQHSRSSTLVVVDCLTLWLTNRLMPAERPAENSRPKETPAHDLSGDIAVISGAIHGAAGPVVLVSNEIGLGVIPMG RETRAFVDALGWLNQDVAGACERVTLMAAGLPLTLKGSP >Mature_198_residues TNMSVVRSELILGGQRSGKSRRAERLAQAWLADSPDHGAVFIATAQAWDDEMRERIACHQRDRAERLPGMVTVEEPLHLA QAIAQHSRSSTLVVVDCLTLWLTNRLMPAERPAENSRPKETPAHDLSGDIAVISGAIHGAAGPVVLVSNEIGLGVIPMGR ETRAFVDALGWLNQDVAGACERVTLMAAGLPLTLKGSP
Specific function: Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate [H]
COG id: COG2087
COG function: function code H; Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788302, Length=189, Percent_Identity=34.9206349206349, Blast_Score=91, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003203 [H]
Pfam domain/function: PF02283 CobU [H]
EC number: =2.7.1.156; =2.7.7.62 [H]
Molecular weight: Translated: 21398; Mature: 21267
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNMSVVRSELILGGQRSGKSRRAERLAQAWLADSPDHGAVFIATAQAWDDEMRERIACH CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHH QRDRAERLPGMVTVEEPLHLAQAIAQHSRSSTLVVVDCLTLWLTNRLMPAERPAENSRPK HHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCC ETPAHDLSGDIAVISGAIHGAAGPVVLVSNEIGLGVIPMGRETRAFVDALGWLNQDVAGA CCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHCCHHHHHH CERVTLMAAGLPLTLKGSP HHHHHHEECCCCEEECCCC >Mature Secondary Structure TNMSVVRSELILGGQRSGKSRRAERLAQAWLADSPDHGAVFIATAQAWDDEMRERIACH CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHH QRDRAERLPGMVTVEEPLHLAQAIAQHSRSSTLVVVDCLTLWLTNRLMPAERPAENSRPK HHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCC ETPAHDLSGDIAVISGAIHGAAGPVVLVSNEIGLGVIPMGRETRAFVDALGWLNQDVAGA CCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHCCHHHHHH CERVTLMAAGLPLTLKGSP HHHHHHEECCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1655697; 1655696 [H]