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The map label for this gene is yvrC [H]

Identifier: 91788644

GI number: 91788644

Start: 2923268

End: 2924143

Strand: Reverse

Name: yvrC [H]

Synonym: Bpro_2782

Alternate gene names: 91788644

Gene position: 2924143-2923268 (Counterclockwise)

Preceding gene: 91788645

Following gene: 91788643

Centisome position: 56.23

GC content: 65.53

Gene sequence:

>876_bases
GTGAAGCGCATCGCCGGTTGGCTGGTTTTGCTGTGCCTGGTGCTGGCGGCGCCGGTCCGCGCCTTGCCCTTGCAATTGAC
TGATGACCGCGGCGTGACCCTCACGTTTGCGCAGTCACCGCAGCACATCGTCAGCATGCTGCCTTCGCTGACCGAAAGCG
TTTGCGCGCTCGATCAGTGCCATCGCCTTATAGGGGTGGATCGTTATTCCAACTACCCGGCCAGCGTGAAGCGCCTGCCC
GTGCTGGGCGGCGGGATCGACCCCAACATCGAGGGCATCGTGGCGCTCAAGCCCGATGTGGTCCTGGTGGCCACATCTTC
CCGGGCCACCGGCCGGCTGGAGGCGCTGGGCATAAAAGTCGTGGCGCTGGAGCCAAAAACCCATGCCGATGTGCGGCGCG
TGCTTCGCAAGCTCGGCGCGCTGCTGGAGGTTCCCGACGACACCGGTGCCGATCGCCTGTGGCGCGTCATCGACAGCAGT
GTCTCGGCCGCCGCGCAATCGCTCTCGCCCAAAGCCAGGGACAGCCGGGTCTACTTTGAGGTGAGCCGGGGGCCCTATGC
CGCCGGCGAGTCCTCCTTCATTGGCGAAACGCTGACCCGGCTGGGCGTGAAGAATGTGGTGCCGGCGTCGCTCGGCCCCT
TCCCCAAGCTGAATCCCGAATTTGTGGTGCGCGCCAATCCCGACGTGATCATGATCGGCAACCGCAGCATGCAGGCCATG
GAGCCTTACCCCGGCTGGGGCAGTATCAAGGCGGTCAGGGAGCGGCGTATTTGTGTCTTCGGTGTGGACGAATCCGACGT
GGTGGTGCGTCCCGGCCCGCGCATGGCCGAGGCGGCGCGCATCATGGCCAAGTGCCTTGAAGGCAAGCAGCGGTGA

Upstream 100 bases:

>100_bases
TTGTCGATGCGCTGGGTTGGCTCAACCAGGACGTGGCTGGCGCCTGCGAACGCGTGACGCTGATGGCAGCCGGTTTGCCG
CTCACCCTGAAAGGTTCGCC

Downstream 100 bases:

>100_bases
GGGCGCCGAACCGTTCTTTTGCCGTGCATGACCAGCACCGCAAGGCCTTCTGGCTGGCCGGTGCCTTGCTGGTGGCCTCC
GCAGCGCTATTGCTGCTGGG

Product: periplasmic-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MKRIAGWLVLLCLVLAAPVRALPLQLTDDRGVTLTFAQSPQHIVSMLPSLTESVCALDQCHRLIGVDRYSNYPASVKRLP
VLGGGIDPNIEGIVALKPDVVLVATSSRATGRLEALGIKVVALEPKTHADVRRVLRKLGALLEVPDDTGADRLWRVIDSS
VSAAAQSLSPKARDSRVYFEVSRGPYAAGESSFIGETLTRLGVKNVVPASLGPFPKLNPEFVVRANPDVIMIGNRSMQAM
EPYPGWGSIKAVRERRICVFGVDESDVVVRPGPRMAEAARIMAKCLEGKQR

Sequences:

>Translated_291_residues
MKRIAGWLVLLCLVLAAPVRALPLQLTDDRGVTLTFAQSPQHIVSMLPSLTESVCALDQCHRLIGVDRYSNYPASVKRLP
VLGGGIDPNIEGIVALKPDVVLVATSSRATGRLEALGIKVVALEPKTHADVRRVLRKLGALLEVPDDTGADRLWRVIDSS
VSAAAQSLSPKARDSRVYFEVSRGPYAAGESSFIGETLTRLGVKNVVPASLGPFPKLNPEFVVRANPDVIMIGNRSMQAM
EPYPGWGSIKAVRERRICVFGVDESDVVVRPGPRMAEAARIMAKCLEGKQR
>Mature_291_residues
MKRIAGWLVLLCLVLAAPVRALPLQLTDDRGVTLTFAQSPQHIVSMLPSLTESVCALDQCHRLIGVDRYSNYPASVKRLP
VLGGGIDPNIEGIVALKPDVVLVATSSRATGRLEALGIKVVALEPKTHADVRRVLRKLGALLEVPDDTGADRLWRVIDSS
VSAAAQSLSPKARDSRVYFEVSRGPYAAGESSFIGETLTRLGVKNVVPASLGPFPKLNPEFVVRANPDVIMIGNRSMQAM
EPYPGWGSIKAVRERRICVFGVDESDVVVRPGPRMAEAARIMAKCLEGKQR

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786353, Length=252, Percent_Identity=26.984126984127, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 31494; Mature: 31494

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIAGWLVLLCLVLAAPVRALPLQLTDDRGVTLTFAQSPQHIVSMLPSLTESVCALDQC
CCHHHHHHHHHHHHHHCCHHHCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
HRLIGVDRYSNYPASVKRLPVLGGGIDPNIEGIVALKPDVVLVATSSRATGRLEALGIKV
HHHHCCHHCCCCCCCHHCCEEECCCCCCCCCEEEEECCCEEEEEECCCCCCCEEEEEEEE
VALEPKTHADVRRVLRKLGALLEVPDDTGADRLWRVIDSSVSAAAQSLSPKARDSRVYFE
EEECCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
VSRGPYAAGESSFIGETLTRLGVKNVVPASLGPFPKLNPEFVVRANPDVIMIGNRSMQAM
ECCCCCCCCCCHHHHHHHHHHCHHHCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCC
EPYPGWGSIKAVRERRICVFGVDESDVVVRPGPRMAEAARIMAKCLEGKQR
CCCCCCCHHHHHHHCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKRIAGWLVLLCLVLAAPVRALPLQLTDDRGVTLTFAQSPQHIVSMLPSLTESVCALDQC
CCHHHHHHHHHHHHHHCCHHHCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
HRLIGVDRYSNYPASVKRLPVLGGGIDPNIEGIVALKPDVVLVATSSRATGRLEALGIKV
HHHHCCHHCCCCCCCHHCCEEECCCCCCCCCEEEEECCCEEEEEECCCCCCCEEEEEEEE
VALEPKTHADVRRVLRKLGALLEVPDDTGADRLWRVIDSSVSAAAQSLSPKARDSRVYFE
EEECCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
VSRGPYAAGESSFIGETLTRLGVKNVVPASLGPFPKLNPEFVVRANPDVIMIGNRSMQAM
ECCCCCCCCCCHHHHHHHHHHCHHHCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCC
EPYPGWGSIKAVRERRICVFGVDESDVVVRPGPRMAEAARIMAKCLEGKQR
CCCCCCCHHHHHHHCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]