| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is cbiG [H]
Identifier: 91788635
GI number: 91788635
Start: 2914969
End: 2915751
Strand: Reverse
Name: cbiG [H]
Synonym: Bpro_2773
Alternate gene names: 91788635
Gene position: 2915751-2914969 (Counterclockwise)
Preceding gene: 91788636
Following gene: 91788634
Centisome position: 56.07
GC content: 63.35
Gene sequence:
>783_bases ATGAGCACGAACACTTTGCCGGAAACCAGTTCCGCTACACCTTCGGATGTGCGCGTCGTTCTGGTCGCCATCACCAAACA CGGCGCCCAGCAAACGGCAGAGCTGGCGCGCCAGTTGCCCCAGGCCAGCGTCTGTGTGGCCGACAAGTTCGCACCGCTGA TGGCCGGTTTGCCCAATCCGGTGCGCGCCTACAGCGGGGCTTTTCGCGACGAAATCGCAACGCTGTTTACCGATTTTGAC CAGGTGGTATTTTTCGTTTCGCTGGGCGCCGTGGTCCGCCTGATTGCCCCGCACCTGAAAAGCAAAGACGAAGACCCGGG CGTGCTGGTGGTGGATGACGCGGCGCAGTTTGTGATTCCCGTGCTGTCAGGCCATGTGGGCGGAGCCAACGCCATGGCCG AGCAGGTGGCCGCGCTGCTGGGCGCAACCGCCGTGCTGACCACCGCTTCCGACGTGGGCAAGACCATTCCGGTCGACATT CTGGGCCGCGAGCTGGGCTGGAAGGTCGAAGCCCCCAAGATCAACATCACCCGTGTCTCGGCCCATGTGGTCAACGGCGA GCCGATTGCCGTGGTGCAGGAGGTGGGCAGCCCGAACTGGTGGACCCGGCCTACGCCGCTGCCTGCAAGCATTCACAAGT TTGAGCGGTTTGAGGATGTGGATTTGGCGCGGTTCAAGGCGGTTTTGTGGATTACGGATGCGGAGGTCACGGAGACCCGC TGGACCGAACTGCATGAGCGCCTGGTGGTGTACCGTCCGCCGCTGGGGCAGGGCGCGCAATGA
Upstream 100 bases:
>100_bases TGTCGCTGCTGCTGGTCAAAAATCCCCACCGCGAACGTGGCGAGATGCTGCGCGGCTGCCGCAAGAAAACAAGCACTGAA ATTGAAGAGGAAACCCAGGA
Downstream 100 bases:
>100_bases TGATTCCTGGCGTGGGGGATGCTCCCGGGCTGGAGCTGCAAGGCGTGTCGCTGCAGCGGGATGGCCGTATGGTTCTGGAT GCACTGGATCTGCAGGTTCC
Product: cobalamin (vitamin B12) biosynthesis CbiG protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MSTNTLPETSSATPSDVRVVLVAITKHGAQQTAELARQLPQASVCVADKFAPLMAGLPNPVRAYSGAFRDEIATLFTDFD QVVFFVSLGAVVRLIAPHLKSKDEDPGVLVVDDAAQFVIPVLSGHVGGANAMAEQVAALLGATAVLTTASDVGKTIPVDI LGRELGWKVEAPKINITRVSAHVVNGEPIAVVQEVGSPNWWTRPTPLPASIHKFERFEDVDLARFKAVLWITDAEVTETR WTELHERLVVYRPPLGQGAQ
Sequences:
>Translated_260_residues MSTNTLPETSSATPSDVRVVLVAITKHGAQQTAELARQLPQASVCVADKFAPLMAGLPNPVRAYSGAFRDEIATLFTDFD QVVFFVSLGAVVRLIAPHLKSKDEDPGVLVVDDAAQFVIPVLSGHVGGANAMAEQVAALLGATAVLTTASDVGKTIPVDI LGRELGWKVEAPKINITRVSAHVVNGEPIAVVQEVGSPNWWTRPTPLPASIHKFERFEDVDLARFKAVLWITDAEVTETR WTELHERLVVYRPPLGQGAQ >Mature_259_residues STNTLPETSSATPSDVRVVLVAITKHGAQQTAELARQLPQASVCVADKFAPLMAGLPNPVRAYSGAFRDEIATLFTDFDQ VVFFVSLGAVVRLIAPHLKSKDEDPGVLVVDDAAQFVIPVLSGHVGGANAMAEQVAALLGATAVLTTASDVGKTIPVDIL GRELGWKVEAPKINITRVSAHVVNGEPIAVVQEVGSPNWWTRPTPLPASIHKFERFEDVDLARFKAVLWITDAEVTETRW TELHERLVVYRPPLGQGAQ
Specific function: Unknown
COG id: COG2073
COG function: function code H; Cobalamin biosynthesis protein CbiG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021745 - InterPro: IPR021744 - InterPro: IPR002750 [H]
Pfam domain/function: PF01890 CbiG; PF11761 CbiG_mid; PF11760 CbiG_N [H]
EC number: NA
Molecular weight: Translated: 27971; Mature: 27840
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTNTLPETSSATPSDVRVVLVAITKHGAQQTAELARQLPQASVCVADKFAPLMAGLPNP CCCCCCCCCCCCCCCHHEEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCH VRAYSGAFRDEIATLFTDFDQVVFFVSLGAVVRLIAPHLKSKDEDPGVLVVDDAAQFVIP HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHH VLSGHVGGANAMAEQVAALLGATAVLTTASDVGKTIPVDILGRELGWKVEAPKINITRVS HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEECCEEEEEEEE AHVVNGEPIAVVQEVGSPNWWTRPTPLPASIHKFERFEDVDLARFKAVLWITDAEVTETR EEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCHHHEEEEEEEECCCHHHHH WTELHERLVVYRPPLGQGAQ HHHHHHCEEEECCCCCCCCC >Mature Secondary Structure STNTLPETSSATPSDVRVVLVAITKHGAQQTAELARQLPQASVCVADKFAPLMAGLPNP CCCCCCCCCCCCCCHHEEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCH VRAYSGAFRDEIATLFTDFDQVVFFVSLGAVVRLIAPHLKSKDEDPGVLVVDDAAQFVIP HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHH VLSGHVGGANAMAEQVAALLGATAVLTTASDVGKTIPVDILGRELGWKVEAPKINITRVS HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEECCEEEEEEEE AHVVNGEPIAVVQEVGSPNWWTRPTPLPASIHKFERFEDVDLARFKAVLWITDAEVTETR EEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCHHHEEEEEEEECCCHHHHH WTELHERLVVYRPPLGQGAQ HHHHHHCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501034; 11677609 [H]