The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yciH [C]

Identifier: 91788596

GI number: 91788596

Start: 2878401

End: 2878826

Strand: Reverse

Name: yciH [C]

Synonym: Bpro_2734

Alternate gene names: 91788596

Gene position: 2878826-2878401 (Counterclockwise)

Preceding gene: 91788597

Following gene: 91788595

Centisome position: 55.36

GC content: 61.97

Gene sequence:

>426_bases
GTGGCCGATTCGTCCGGCCTGGTTTTTTTCATCGCTGCCAAGCTCAACCCATTCATGAAAAGCAATCCATCCGGCGGACT
CGTCTATTCCACCGACGCGGGACGAATGTGCCCCGATTGCCGCAAGCCCGTGGCGGGCTGCGTTTGCCGTCAGCTCAAGG
CCATGGCAACATTGGACGGAAAGTCCGGCGGTGTGGTCCTTGTCTCCAGGGAGAGCAAAGGCCGTGGCGGGAAAAGCGTG
ACTGTGGTGAAAGGGCTGCCGCTGGATGCACTGGCGCTGGCCCAGCTGGGAAAGCAGCTCAAGACAGCGTGCGGCTCGGG
TGGCACGGTGAAGGACGGCGTGATCGAGGTGCAGGGCGAGCACTGCGAGCAGGTGATGCAGGCGCTGAAGAAGCAGGGTT
ATGTCGTCAAGCGGAGCGGTGGTTAG

Upstream 100 bases:

>100_bases
GTACTTATCGAAGTACTTATCGAAGTGCCCTGTCGGGACGCAAGCCGGGCGGTTGCGAAGGCGCTGCACCGGCCGGCAGG
TTTCAAGCCTTCACTGCACC

Downstream 100 bases:

>100_bases
TGAACCCCGAAGACCTGCAGCTCCTGCTGACCCGCGAAATGCCTTATGGCAAATACAAGGGGCGGCTGATTGCCGACTTG
CCGGGCAACTACCTCAACTG

Product: translation initiation factor 1 (eIF-1/SUI1)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MADSSGLVFFIAAKLNPFMKSNPSGGLVYSTDAGRMCPDCRKPVAGCVCRQLKAMATLDGKSGGVVLVSRESKGRGGKSV
TVVKGLPLDALALAQLGKQLKTACGSGGTVKDGVIEVQGEHCEQVMQALKKQGYVVKRSGG

Sequences:

>Translated_141_residues
MADSSGLVFFIAAKLNPFMKSNPSGGLVYSTDAGRMCPDCRKPVAGCVCRQLKAMATLDGKSGGVVLVSRESKGRGGKSV
TVVKGLPLDALALAQLGKQLKTACGSGGTVKDGVIEVQGEHCEQVMQALKKQGYVVKRSGG
>Mature_140_residues
ADSSGLVFFIAAKLNPFMKSNPSGGLVYSTDAGRMCPDCRKPVAGCVCRQLKAMATLDGKSGGVVLVSRESKGRGGKSVT
VVKGLPLDALALAQLGKQLKTACGSGGTVKDGVIEVQGEHCEQVMQALKKQGYVVKRSGG

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family [H]

Homologues:

Organism=Escherichia coli, GI87081867, Length=121, Percent_Identity=38.8429752066116, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005872
- InterPro:   IPR001950 [H]

Pfam domain/function: PF01253 SUI1 [H]

EC number: NA

Molecular weight: Translated: 14545; Mature: 14414

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADSSGLVFFIAAKLNPFMKSNPSGGLVYSTDAGRMCPDCRKPVAGCVCRQLKAMATLDG
CCCCCCEEEEEEECCCHHHCCCCCCCEEEECCCCCCCCHHCCHHHHHHHHHHHHHHHCCC
KSGGVVLVSRESKGRGGKSVTVVKGLPLDALALAQLGKQLKTACGSGGTVKDGVIEVQGE
CCCCEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCH
HCEQVMQALKKQGYVVKRSGG
HHHHHHHHHHHCCEEEEECCC
>Mature Secondary Structure 
ADSSGLVFFIAAKLNPFMKSNPSGGLVYSTDAGRMCPDCRKPVAGCVCRQLKAMATLDG
CCCCCEEEEEEECCCHHHCCCCCCCEEEECCCCCCCCHHCCHHHHHHHHHHHHHHHCCC
KSGGVVLVSRESKGRGGKSVTVVKGLPLDALALAQLGKQLKTACGSGGTVKDGVIEVQGE
CCCCEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCH
HCEQVMQALKKQGYVVKRSGG
HHHHHHHHHHHCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]