| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is ypeB [C]
Identifier: 91788595
GI number: 91788595
Start: 2878189
End: 2878401
Strand: Reverse
Name: ypeB [C]
Synonym: Bpro_2733
Alternate gene names: 91788595
Gene position: 2878401-2878189 (Counterclockwise)
Preceding gene: 91788596
Following gene: 91788594
Centisome position: 55.35
GC content: 59.15
Gene sequence:
>213_bases GTGAACCCCGAAGACCTGCAGCTCCTGCTGACCCGCGAAATGCCTTATGGCAAATACAAGGGGCGGCTGATTGCCGACTT GCCGGGCAACTACCTCAACTGGTTTGCCCGTGAAGGTTTTCCGAAGGGCGAGATTGGTCGCCTGCTGGCGCTGATGCACG AGATCGACCACAACGGCCTGTCGTCGCTACTGGATCCGCTTCGCAAGCGATAG
Upstream 100 bases:
>100_bases CGGTGAAGGACGGCGTGATCGAGGTGCAGGGCGAGCACTGCGAGCAGGTGATGCAGGCGCTGAAGAAGCAGGGTTATGTC GTCAAGCGGAGCGGTGGTTA
Downstream 100 bases:
>100_bases GGTTCGCCGTCTGTCGAAGATCGCCAAAATGCTATTAAAAATATGGTTCTTCATCAATTTCACTGTGATTTTTTGCTCGC TGCGGGACAATCCAGTGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MNPEDLQLLLTREMPYGKYKGRLIADLPGNYLNWFAREGFPKGEIGRLLALMHEIDHNGLSSLLDPLRKR
Sequences:
>Translated_70_residues MNPEDLQLLLTREMPYGKYKGRLIADLPGNYLNWFAREGFPKGEIGRLLALMHEIDHNGLSSLLDPLRKR >Mature_70_residues MNPEDLQLLLTREMPYGKYKGRLIADLPGNYLNWFAREGFPKGEIGRLLALMHEIDHNGLSSLLDPLRKR
Specific function: Unknown
COG id: COG3530
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082098, Length=70, Percent_Identity=44.2857142857143, Blast_Score=61, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8094; Mature: 8094
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPEDLQLLLTREMPYGKYKGRLIADLPGNYLNWFAREGFPKGEIGRLLALMHEIDHNGL CCCCHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCH SSLLDPLRKR HHHHHHHHCC >Mature Secondary Structure MNPEDLQLLLTREMPYGKYKGRLIADLPGNYLNWFAREGFPKGEIGRLLALMHEIDHNGL CCCCHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCH SSLLDPLRKR HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA