Click here to switch to the map view.

The map label for this gene is tnpA [H]

Identifier: 91788594

GI number: 91788594

Start: 2876846

End: 2878069

Strand: Reverse

Name: tnpA [H]

Synonym: Bpro_2732

Alternate gene names: 91788594

Gene position: 2878069-2876846 (Counterclockwise)

Preceding gene: 91788595

Following gene: 91788585

Centisome position: 55.34

GC content: 56.37

Gene sequence:

>1224_bases
ATGAAAGATACGGCGCTGTATGAGCAGCTTCTTGGACTGAAGGCACCCTGGTCGGTCAAGAAGGTAGACCTTTCTTTGAC
AGACCAGCGCGTGGTGGTCGAAGTCGTGTTGAAGAAGGGTCAGGTATGGGCTGACTCCACCGATGCGACCAAGAGGGCTC
ACATCAATGGCTGGAGCGAGCGCCAATGGCGTCACCTTGATACATGCCAGTTTGAGACGATCATCAGGGCACGTATTCCC
CAGCTCAAATTCAGTGACGGCACTGTCGAAGAGTTGATGGTGCCCTGGGCGGAGCGCTACAGCCGGGTCACCACCTTGAT
GGCTGCGTTCGTTATCAAACTGCTTGAAGCCTGTCCCACCACGCAAGCCGTATGTACGCTCACACGACTGTCCTGGAGCA
CGGTCAACGCCATCATGGTCAGCGCCGTGGCGCGAGGCATGCTGCGGCGTACCGAGGAAGAGATTTCGTACCTTGGCATC
GATGAAAAGAGTTCGGAGAGAGGCCACACCTACGCCAGCATCCTGACCGACATTGACCGCTCGCGGGTGCTGGACTTGGT
GCCAGACAGGAAGCTGGGAGCGGCCGTGAGCTTGCTGGAAACGCTTTCTCCGGCGCAACGCATGTCGGTCAAGGCGGTGG
CCATGGATATGTGGCCGGCGTACATGAGTGCGGCCAGGCAATGCATGCCGCAGGCGGACATCGTGCATGACAAGTTTCAC
ATCTCCAAGTACCTTGGTGAGGCAGTGGATGCTGTGAGAAAACAGGAGCACCGCAAGTTGTCCCAAGCAGGCACCTCGCC
ATTGGCAGGCAGCAAATGGGCGTGGTTGAGAAAGTATCCCGATGGCCGTAGCGCTGAAGCCGTCTCGTTTCGGGCCTTGA
ACCAGCTCAACTTGAAGACAAGCCGGGCCTGGTGCATCAAGGAGAACTTTACCCAGTTCTGGAGCTACAGCTACAAAGGA
GCTGCCAAGCGCTTCTTCAAAGCCTGGTCGAATAACGCGATGAGGAGTCGCCTGGAGCCTGTGAAAAAGGTAGTCAGGAT
GCTCCGACGCCACGAGGAAGGACTGCTGAACTATAGCCAACATGGAATCAGCAACGCCTGTGCAGAAGGCTTCAATAGTG
CCATCCAGCTCATCAAAGCCAATGCGCGCGGGTTTCGCAACTTCACCAACTACCGGGCAAGGATTCTGTTTCATTGTGGA
AAGTTGAACTTGGCTATGGCCTAG

Upstream 100 bases:

>100_bases
ATCGCCAAAATGCTATTAAAAATATGGTTCTTCATCAATTTCACTGTGATTTTTTGCTCGCTGCGGGACAATCCAGTGAT
TCAAAATTACCAGCTTGAAC

Downstream 100 bases:

>100_bases
GAAAAGCTCCCAGTGAATTCAACGAAGCTCCAAAAATATAGTTGATGGGTGGCGTTTTTGATCGGCGACAGGGCCTTTTT
TGAAATGAAAATTCCGGAGG

Product: transposase, IS204/IS1001/IS1096/IS1165

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MKDTALYEQLLGLKAPWSVKKVDLSLTDQRVVVEVVLKKGQVWADSTDATKRAHINGWSERQWRHLDTCQFETIIRARIP
QLKFSDGTVEELMVPWAERYSRVTTLMAAFVIKLLEACPTTQAVCTLTRLSWSTVNAIMVSAVARGMLRRTEEEISYLGI
DEKSSERGHTYASILTDIDRSRVLDLVPDRKLGAAVSLLETLSPAQRMSVKAVAMDMWPAYMSAARQCMPQADIVHDKFH
ISKYLGEAVDAVRKQEHRKLSQAGTSPLAGSKWAWLRKYPDGRSAEAVSFRALNQLNLKTSRAWCIKENFTQFWSYSYKG
AAKRFFKAWSNNAMRSRLEPVKKVVRMLRRHEEGLLNYSQHGISNACAEGFNSAIQLIKANARGFRNFTNYRARILFHCG
KLNLAMA

Sequences:

>Translated_407_residues
MKDTALYEQLLGLKAPWSVKKVDLSLTDQRVVVEVVLKKGQVWADSTDATKRAHINGWSERQWRHLDTCQFETIIRARIP
QLKFSDGTVEELMVPWAERYSRVTTLMAAFVIKLLEACPTTQAVCTLTRLSWSTVNAIMVSAVARGMLRRTEEEISYLGI
DEKSSERGHTYASILTDIDRSRVLDLVPDRKLGAAVSLLETLSPAQRMSVKAVAMDMWPAYMSAARQCMPQADIVHDKFH
ISKYLGEAVDAVRKQEHRKLSQAGTSPLAGSKWAWLRKYPDGRSAEAVSFRALNQLNLKTSRAWCIKENFTQFWSYSYKG
AAKRFFKAWSNNAMRSRLEPVKKVVRMLRRHEEGLLNYSQHGISNACAEGFNSAIQLIKANARGFRNFTNYRARILFHCG
KLNLAMA
>Mature_407_residues
MKDTALYEQLLGLKAPWSVKKVDLSLTDQRVVVEVVLKKGQVWADSTDATKRAHINGWSERQWRHLDTCQFETIIRARIP
QLKFSDGTVEELMVPWAERYSRVTTLMAAFVIKLLEACPTTQAVCTLTRLSWSTVNAIMVSAVARGMLRRTEEEISYLGI
DEKSSERGHTYASILTDIDRSRVLDLVPDRKLGAAVSLLETLSPAQRMSVKAVAMDMWPAYMSAARQCMPQADIVHDKFH
ISKYLGEAVDAVRKQEHRKLSQAGTSPLAGSKWAWLRKYPDGRSAEAVSFRALNQLNLKTSRAWCIKENFTQFWSYSYKG
AAKRFFKAWSNNAMRSRLEPVKKVVRMLRRHEEGLLNYSQHGISNACAEGFNSAIQLIKANARGFRNFTNYRARILFHCG
KLNLAMA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 46256; Mature: 46256

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDTALYEQLLGLKAPWSVKKVDLSLTDQRVVVEVVLKKGQVWADSTDATKRAHINGWSE
CCHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCEECCCCCCHHHHHCCCCCH
RQWRHLDTCQFETIIRARIPQLKFSDGTVEELMVPWAERYSRVTTLMAAFVIKLLEACPT
HHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TQAVCTLTRLSWSTVNAIMVSAVARGMLRRTEEEISYLGIDEKSSERGHTYASILTDIDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
SRVLDLVPDRKLGAAVSLLETLSPAQRMSVKAVAMDMWPAYMSAARQCMPQADIVHDKFH
HHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ISKYLGEAVDAVRKQEHRKLSQAGTSPLAGSKWAWLRKYPDGRSAEAVSFRALNQLNLKT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCC
SRAWCIKENFTQFWSYSYKGAAKRFFKAWSNNAMRSRLEPVKKVVRMLRRHEEGLLNYSQ
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HGISNACAEGFNSAIQLIKANARGFRNFTNYRARILFHCGKLNLAMA
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEECC
>Mature Secondary Structure
MKDTALYEQLLGLKAPWSVKKVDLSLTDQRVVVEVVLKKGQVWADSTDATKRAHINGWSE
CCHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCEECCCCCCHHHHHCCCCCH
RQWRHLDTCQFETIIRARIPQLKFSDGTVEELMVPWAERYSRVTTLMAAFVIKLLEACPT
HHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TQAVCTLTRLSWSTVNAIMVSAVARGMLRRTEEEISYLGIDEKSSERGHTYASILTDIDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
SRVLDLVPDRKLGAAVSLLETLSPAQRMSVKAVAMDMWPAYMSAARQCMPQADIVHDKFH
HHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ISKYLGEAVDAVRKQEHRKLSQAGTSPLAGSKWAWLRKYPDGRSAEAVSFRALNQLNLKT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCC
SRAWCIKENFTQFWSYSYKGAAKRFFKAWSNNAMRSRLEPVKKVVRMLRRHEEGLLNYSQ
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HGISNACAEGFNSAIQLIKANARGFRNFTNYRARILFHCGKLNLAMA
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]