| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is serB [C]
Identifier: 91788582
GI number: 91788582
Start: 2866893
End: 2867603
Strand: Direct
Name: serB [C]
Synonym: Bpro_2720
Alternate gene names: 91788582
Gene position: 2866893-2867603 (Clockwise)
Preceding gene: 91788581
Following gene: 91788583
Centisome position: 55.13
GC content: 63.99
Gene sequence:
>711_bases ATGCAACCCACTGAAATCTCCCCCGGCCTCGTCGTCAACGTCGCCACACCCGACCTGAAACTCAGCGATTTCAAGCTGAT CGCCTTTGACATGGACTCTACGCTCATCAACATTGAGTGCGTGGACGAAATTGCCGACGCGGCCGGCCGCAAGGCGGAAG TGGCGGCCATCACCGAAGCGGCCATGCGCGGCGAAATCAGCGACTACAAGGAAAGCCTTCGCCAGCGCGTGGCCCTGCTC AAGGGCGTCAGCGTCGCCAGCATGGACGAGGTCTACCGCACGCGGCTCCGGTTGAACCCCGGCGCCGCCAGGCTGGTACA AGCCTGCAAGGACGCCGGCCTGAAGGTGCTGCTGGTCAGCGGCGGCTTCACCTTTTTTACCGACCGCATCCGGGACGAGC TGGGTATTGACTACACCCGCTCCAATGTCCTGGAGACCACGGACGGCCTGCTCACCGGCCGCATGGTGGACCAGCCTTGG GGCGATATCTGCGACGGCGAAGAAAAGCGCAAGATGCTGCTGGAGACCTGCGGCCAGCTGGGCATCAGCCCGCGGCAGGC CATTGCCATGGGTGACGGCGCCAACGACCTGCCCATGATGGGTGAAGCCGGTTTGTCGGTGGCCTACCACGCCAAGCCCA GGGTGCGCGAGCAGGCCATGGTGGCCATCAACGAGGGCGGGCTGGACCGGTTGCTGGAACTCGTGAAATAG
Upstream 100 bases:
>100_bases TGCAAAACCTGGAGCACCTGAGCCGCGTGAAATCGTGGATGCGCAACACGCAGCCAGCCACACAGCGCGGTGTATCTCTT TAACCGTATTTTTTTAATCC
Downstream 100 bases:
>100_bases GCCGGCGCCGCCGCCATGCCCTTATTCAGGAAATTCGAAAGGCTGCTGCACGCCTACCCGGAGGCCGAGCCAGCCGTACT GCCCAAGGGCTTCGTCGCCT
Product: phosphoserine phosphatase
Products: NA
Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MQPTEISPGLVVNVATPDLKLSDFKLIAFDMDSTLINIECVDEIADAAGRKAEVAAITEAAMRGEISDYKESLRQRVALL KGVSVASMDEVYRTRLRLNPGAARLVQACKDAGLKVLLVSGGFTFFTDRIRDELGIDYTRSNVLETTDGLLTGRMVDQPW GDICDGEEKRKMLLETCGQLGISPRQAIAMGDGANDLPMMGEAGLSVAYHAKPRVREQAMVAINEGGLDRLLELVK
Sequences:
>Translated_236_residues MQPTEISPGLVVNVATPDLKLSDFKLIAFDMDSTLINIECVDEIADAAGRKAEVAAITEAAMRGEISDYKESLRQRVALL KGVSVASMDEVYRTRLRLNPGAARLVQACKDAGLKVLLVSGGFTFFTDRIRDELGIDYTRSNVLETTDGLLTGRMVDQPW GDICDGEEKRKMLLETCGQLGISPRQAIAMGDGANDLPMMGEAGLSVAYHAKPRVREQAMVAINEGGLDRLLELVK >Mature_236_residues MQPTEISPGLVVNVATPDLKLSDFKLIAFDMDSTLINIECVDEIADAAGRKAEVAAITEAAMRGEISDYKESLRQRVALL KGVSVASMDEVYRTRLRLNPGAARLVQACKDAGLKVLLVSGGFTFFTDRIRDELGIDYTRSNVLETTDGLLTGRMVDQPW GDICDGEEKRKMLLETCGQLGISPRQAIAMGDGANDLPMMGEAGLSVAYHAKPRVREQAMVAINEGGLDRLLELVK
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Escherichia coli, GI1790849, Length=203, Percent_Identity=47.7832512315271, Blast_Score=169, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6321647, Length=212, Percent_Identity=39.1509433962264, Blast_Score=151, Evalue=8e-38, Organism=Drosophila melanogaster, GI24661601, Length=112, Percent_Identity=32.1428571428571, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR023190 - InterPro: IPR004469 [H]
Pfam domain/function: PF01842 ACT; PF00702 Hydrolase [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 25646; Mature: 25646
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPTEISPGLVVNVATPDLKLSDFKLIAFDMDSTLINIECVDEIADAAGRKAEVAAITEA CCCCCCCCCEEEEEECCCCEECCEEEEEEECCCEEEEEEEHHHHHHHCCCCHHHHHHHHH AMRGEISDYKESLRQRVALLKGVSVASMDEVYRTRLRLNPGAARLVQACKDAGLKVLLVS HHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEE GGFTFFTDRIRDELGIDYTRSNVLETTDGLLTGRMVDQPWGDICDGEEKRKMLLETCGQL CCHHHHHHHHHHHHCCCHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHC GISPRQAIAMGDGANDLPMMGEAGLSVAYHAKPRVREQAMVAINEGGLDRLLELVK CCCHHHEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHEEEECCCCHHHHHHHHC >Mature Secondary Structure MQPTEISPGLVVNVATPDLKLSDFKLIAFDMDSTLINIECVDEIADAAGRKAEVAAITEA CCCCCCCCCEEEEEECCCCEECCEEEEEEECCCEEEEEEEHHHHHHHCCCCHHHHHHHHH AMRGEISDYKESLRQRVALLKGVSVASMDEVYRTRLRLNPGAARLVQACKDAGLKVLLVS HHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEE GGFTFFTDRIRDELGIDYTRSNVLETTDGLLTGRMVDQPWGDICDGEEKRKMLLETCGQL CCHHHHHHHHHHHHCCCHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHC GISPRQAIAMGDGANDLPMMGEAGLSVAYHAKPRVREQAMVAINEGGLDRLLELVK CCCHHHEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHEEEECCCCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]