| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788580
Identifier: 91788580
GI number: 91788580
Start: 2865924
End: 2866232
Strand: Direct
Name: 91788580
Synonym: Bpro_2718
Alternate gene names: NA
Gene position: 2865924-2866232 (Clockwise)
Preceding gene: 91788579
Following gene: 91788581
Centisome position: 55.11
GC content: 56.96
Gene sequence:
>309_bases ATGCATCACGTCGCTGAAAAAACTGCTGAATACCCAGTGGAAGCCCCGGCACGTCATGTCCGCCTGTTTCGCAACGGGGC GAATCAGGCCGTGCGAATTCCCAAAGAATTTGAATTGCCCGGCAAAGAGGCGGTCATGCACCGCGAAGGCGACAAGCTCA TCATCGAACCGATTCAACCAAAGCATCCCAAGGGCAGCGCTGCGGCACTGCTGGCCGCGCTGGAAAGCATGAAAAGCTGG GAGCCCATGCTCGAAGAATTTCCCGACGTGGACGAGGGGCTCTTGCCGCTGGATGACATCAAGCTATGA
Upstream 100 bases:
>100_bases TGGTGCGCGATGTGCTCAGGAGTTTGGGGCAGCCCAAACCCGTGACATATGCCGAGGCATAGGCTAAACTAACGCATATC CGCACTCATTGGAGAAGATC
Downstream 100 bases:
>100_bases GTAGAAGGTTTCTGCTCGACACCAATATCATTTCCAACATGATGCGTGACGCCAACGGCATCGCCGCCCAGCGCTTTGCA CAAATCGCAAAAGAATTCGA
Product: virulence-associated protein VapB-like protein
Products: NA
Alternate protein names: SpoVT/AbrB-Like; SpoVT/AbrB Family Protein; Virulence-Associated Protein VapB-Like; SpoVT/AbrB Domain Protein; SpoVT/AbrB Domain-Containing Protein; NtrP Protein; Virulence-Associated Protein
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MHHVAEKTAEYPVEAPARHVRLFRNGANQAVRIPKEFELPGKEAVMHREGDKLIIEPIQPKHPKGSAAALLAALESMKSW EPMLEEFPDVDEGLLPLDDIKL
Sequences:
>Translated_102_residues MHHVAEKTAEYPVEAPARHVRLFRNGANQAVRIPKEFELPGKEAVMHREGDKLIIEPIQPKHPKGSAAALLAALESMKSW EPMLEEFPDVDEGLLPLDDIKL >Mature_102_residues MHHVAEKTAEYPVEAPARHVRLFRNGANQAVRIPKEFELPGKEAVMHREGDKLIIEPIQPKHPKGSAAALLAALESMKSW EPMLEEFPDVDEGLLPLDDIKL
Specific function: Unknown
COG id: COG4456
COG function: function code S; Virulence-associated protein and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11441; Mature: 11441
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHVAEKTAEYPVEAPARHVRLFRNGANQAVRIPKEFELPGKEAVMHREGDKLIIEPIQP CCCCHHHHHCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCHHHHHCCCCCEEEECCCCC KHPKGSAAALLAALESMKSWEPMLEEFPDVDEGLLPLDDIKL CCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MHHVAEKTAEYPVEAPARHVRLFRNGANQAVRIPKEFELPGKEAVMHREGDKLIIEPIQP CCCCHHHHHCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCHHHHHCCCCCEEEECCCCC KHPKGSAAALLAALESMKSWEPMLEEFPDVDEGLLPLDDIKL CCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA