| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788574
Identifier: 91788574
GI number: 91788574
Start: 2857338
End: 2858045
Strand: Reverse
Name: 91788574
Synonym: Bpro_2712
Alternate gene names: NA
Gene position: 2858045-2857338 (Counterclockwise)
Preceding gene: 91788577
Following gene: 91788572
Centisome position: 54.96
GC content: 62.01
Gene sequence:
>708_bases ATGCGTACTCAAAAATGGATAGCTGCTTGCTTGCTGCTGGCAGGGGCCGCAGGCGCTTTGGCGCAAACCACGCCGCGAGA GCCCCTGCAAAATGTGGCTCAGCTGTCGGCCAGCGGGTCGGTAGAGGTGCAGCAGGATCTGCTGTCAATTTCAATGAGCA CCACGGTAGGCGGCACCGATGCAGGTGCGGTGCAAACCCAGCTCAAGCAGGCGCTTGACACCGCATTGGCCCAGGCCCGG CAGGCCGTAGCCCCCGGCCAGATGGATGTGCGGACCGGGAACTTCAGCCTGTACCCGCGCTACGGCAAGGACGGCAAGAT CAATGGCTGGCAGGGTTCCACCGAATTGGTGCTTGAAGGCCGGGATTTTTCACGCATTACCAGCACGGCTGGCAAGATCC AGACCCTGACGCTGGCCAATGTCAGCTTCGCCTTGAGTCGTGAGCAGCGTGCCAGGGTGGAGGGCGAAGCCCAGGCGCTG GCGATCGAGCGCTTCAAGGCCAAAGCCGGCGAGGTATCGAAAAGCTTCGGCTTTAACAGCTACACGCTGCGCGAGGTGTC CATCACCGCCAACGACCAGGGCTACCCCCCTCGTCCGCGCATGATGGCCATGCAGGCCAAGGGCGATATGGCGGAAGCGG CCATTCCGGTGGAGGCTGGCAAGAGCACGGTGCTGGTGAGTGTGAGTGGATCAGTTCAGATGAAGTAG
Upstream 100 bases:
>100_bases CGGGCACATACACGGTGGGAGGCCGCGTGGAGTTGCGCCAGTTTCTGTACATGATTTCCACTCTTCACTCTTTCTTCACT GCCCGAAAGGTAATCACTCG
Downstream 100 bases:
>100_bases AGGGTTGCTCGCATACGCCCTCTTTTCGGGGGCATTCCTCAGGCCGCTGACAGGCGGTTTTTACGTGCAATAACCACGGC ACGCAGATGGTCGTAGATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MRTQKWIAACLLLAGAAGALAQTTPREPLQNVAQLSASGSVEVQQDLLSISMSTTVGGTDAGAVQTQLKQALDTALAQAR QAVAPGQMDVRTGNFSLYPRYGKDGKINGWQGSTELVLEGRDFSRITSTAGKIQTLTLANVSFALSREQRARVEGEAQAL AIERFKAKAGEVSKSFGFNSYTLREVSITANDQGYPPRPRMMAMQAKGDMAEAAIPVEAGKSTVLVSVSGSVQMK
Sequences:
>Translated_235_residues MRTQKWIAACLLLAGAAGALAQTTPREPLQNVAQLSASGSVEVQQDLLSISMSTTVGGTDAGAVQTQLKQALDTALAQAR QAVAPGQMDVRTGNFSLYPRYGKDGKINGWQGSTELVLEGRDFSRITSTAGKIQTLTLANVSFALSREQRARVEGEAQAL AIERFKAKAGEVSKSFGFNSYTLREVSITANDQGYPPRPRMMAMQAKGDMAEAAIPVEAGKSTVLVSVSGSVQMK >Mature_235_residues MRTQKWIAACLLLAGAAGALAQTTPREPLQNVAQLSASGSVEVQQDLLSISMSTTVGGTDAGAVQTQLKQALDTALAQAR QAVAPGQMDVRTGNFSLYPRYGKDGKINGWQGSTELVLEGRDFSRITSTAGKIQTLTLANVSFALSREQRARVEGEAQAL AIERFKAKAGEVSKSFGFNSYTLREVSITANDQGYPPRPRMMAMQAKGDMAEAAIPVEAGKSTVLVSVSGSVQMK
Specific function: Unknown
COG id: COG3471
COG function: function code S; Predicted periplasmic/secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24900; Mature: 24900
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTQKWIAACLLLAGAAGALAQTTPREPLQNVAQLSASGSVEVQQDLLSISMSTTVGGTD CCCHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC AGAVQTQLKQALDTALAQARQAVAPGQMDVRTGNFSLYPRYGKDGKINGWQGSTELVLEG CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCEEEEEC RDFSRITSTAGKIQTLTLANVSFALSREQRARVEGEAQALAIERFKAKAGEVSKSFGFNS CCHHHHHHCCCCEEEEEEECHHEECCHHHHHHHCCHHHHHHHHHHHHHHCCHHHHCCCCC YTLREVSITANDQGYPPRPRMMAMQAKGDMAEAAIPVEAGKSTVLVSVSGSVQMK EEEEEEEEEECCCCCCCCCCEEEEECCCCHHHHEEEEECCCCEEEEEECCCEEEC >Mature Secondary Structure MRTQKWIAACLLLAGAAGALAQTTPREPLQNVAQLSASGSVEVQQDLLSISMSTTVGGTD CCCHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC AGAVQTQLKQALDTALAQARQAVAPGQMDVRTGNFSLYPRYGKDGKINGWQGSTELVLEG CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCEEEEEC RDFSRITSTAGKIQTLTLANVSFALSREQRARVEGEAQALAIERFKAKAGEVSKSFGFNS CCHHHHHHCCCCEEEEEEECHHEECCHHHHHHHCCHHHHHHHHHHHHHHCCHHHHCCCCC YTLREVSITANDQGYPPRPRMMAMQAKGDMAEAAIPVEAGKSTVLVSVSGSVQMK EEEEEEEEEECCCCCCCCCCEEEEECCCCHHHHEEEEECCCCEEEEEECCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA