| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is hipA [C]
Identifier: 91788511
GI number: 91788511
Start: 2788044
End: 2789387
Strand: Reverse
Name: hipA [C]
Synonym: Bpro_2649
Alternate gene names: 91788511
Gene position: 2789387-2788044 (Counterclockwise)
Preceding gene: 91788512
Following gene: 91788510
Centisome position: 53.64
GC content: 66.89
Gene sequence:
>1344_bases ATGAACGTCCTGGCGCTCGATATCTACGTGGGCTCCCTGCGGGCCGGGCTGCTGTTCCAGTACGGCACGGGCAGCACCGC GCTCACGCGCTTCATTCCAGACCCCTCCTTCTGGTCGCGGCCCGACGCGCCGGTGCTGTCGTGGGCCGCCACCGATGACG ACCCCCAGCGCCGTGAAATTTTCTGGCGCAGCTACGTCAGCACGCCTTTTTTCAATGCGGAAGGTGGCCGCCTGCCGGCT TTTTTCCAGAACCTGCTGCCCGAGGGGCCGCTGCGCCGCCACCTCGAAGAGCTGCGCGGCTGCGGGCCGGGCGACCACTT CGACCTGCTGGCCGCCTGCGGCACCGACTTGCCGGGCAATGTCTACGCTTACCCCGCCCACCTCGATGCCGACGCGCTCG CTGCCGTGGTGACCCAGCACAACGACGCGCTGGAGATGTCCGTCACGGCCGACCCCTTGCCCGAGGCCACGTCCCTGTCG GGCGTGCAACCCAAGCTTGCACTGGTCGCGCAGCATGGGCGTTATGTGGCGCGGACCCGGGACGTGCAGGGCACGCACAT CATTGCCAAGCTGCCGACGGTTGAATATGCCTTGCTGCCCGAGGTGGAAGAGTTGTCGCTGCGGCTTGCGCAGGCCGCCG GCGCAGATGTCTGCGCCGCATGGCTGGCCCCGCTGGAGCAGATCGTGGCCGAGCAGCCCTTTGTGCTGGGCGAGAGCCGG CATTTTCTGGTGGTCAGGCGCTTTGACCGCGGGCCCGGGGGGCACATCCACTGCGAAGACTTCGCGCAGATCCTGCGCAT ACAGCCCGAAGAAAAATATACGCACCCGGCTGCCACCTACGCCACCATGGCCAGCACGCTGCGCGGCGGCATGGGTCTGG GACAGCGGGGCGAGGCCGCTGCCGAAGAACTGATCCGCCGTGCGATGGTCAACGAGATGCTGGGCAACTACGACGCGCAT GTGAAGAATTTCGGGGTGCTCTACCGCGATGGCCGCACACCGGAATTGTCTCCAGCCTACGACGTGGTGGCCTACGCCGC CTACCTGGGGGGACGCGGCCATGCCTTGCGCTTTGTGCCCGGTGGCGAAAAACAGGCGCGGCTCACCCCGCAGACCGTGC GCAGCTTTTGCAACGCCACCGGCATGTTCGAGACCCGCGTGCGCGGCGTGCTCAATGACGCAGTGGGCAAAGCCTGCGCC TCCTGGCCGTCATTGATTGAAGCCAGCAGCCTGCTGGACAAGCAAAAGCACAACCTGCTGCGGCATTTTGAAGCGTGCGA CGCGGTGCAGAGCTGGCGGCGCAGGCGCGCAGGCAGTGCCGGCCGCAAGGCTGTGGCACCCTGA
Upstream 100 bases:
>100_bases GTACTGGAGAGGGCCCTGAGCCGGCGCTTTCCCAGGTTGACCGAATCATTGCGCAAACCCGATTGCGCTCCCAGGCCGGC GCCAAAGGCCCGCTGCCCAA
Downstream 100 bases:
>100_bases AGCTTGCACGGTGCTTGCTAGACAATCTCAAACCCTTGAAATCTGGAGCCCCCCAATGATTTTTGCGCCCGACCTTGCGA CGGTTACCCACGGCATCCAA
Product: HipA-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MNVLALDIYVGSLRAGLLFQYGTGSTALTRFIPDPSFWSRPDAPVLSWAATDDDPQRREIFWRSYVSTPFFNAEGGRLPA FFQNLLPEGPLRRHLEELRGCGPGDHFDLLAACGTDLPGNVYAYPAHLDADALAAVVTQHNDALEMSVTADPLPEATSLS GVQPKLALVAQHGRYVARTRDVQGTHIIAKLPTVEYALLPEVEELSLRLAQAAGADVCAAWLAPLEQIVAEQPFVLGESR HFLVVRRFDRGPGGHIHCEDFAQILRIQPEEKYTHPAATYATMASTLRGGMGLGQRGEAAAEELIRRAMVNEMLGNYDAH VKNFGVLYRDGRTPELSPAYDVVAYAAYLGGRGHALRFVPGGEKQARLTPQTVRSFCNATGMFETRVRGVLNDAVGKACA SWPSLIEASSLLDKQKHNLLRHFEACDAVQSWRRRRAGSAGRKAVAP
Sequences:
>Translated_447_residues MNVLALDIYVGSLRAGLLFQYGTGSTALTRFIPDPSFWSRPDAPVLSWAATDDDPQRREIFWRSYVSTPFFNAEGGRLPA FFQNLLPEGPLRRHLEELRGCGPGDHFDLLAACGTDLPGNVYAYPAHLDADALAAVVTQHNDALEMSVTADPLPEATSLS GVQPKLALVAQHGRYVARTRDVQGTHIIAKLPTVEYALLPEVEELSLRLAQAAGADVCAAWLAPLEQIVAEQPFVLGESR HFLVVRRFDRGPGGHIHCEDFAQILRIQPEEKYTHPAATYATMASTLRGGMGLGQRGEAAAEELIRRAMVNEMLGNYDAH VKNFGVLYRDGRTPELSPAYDVVAYAAYLGGRGHALRFVPGGEKQARLTPQTVRSFCNATGMFETRVRGVLNDAVGKACA SWPSLIEASSLLDKQKHNLLRHFEACDAVQSWRRRRAGSAGRKAVAP >Mature_447_residues MNVLALDIYVGSLRAGLLFQYGTGSTALTRFIPDPSFWSRPDAPVLSWAATDDDPQRREIFWRSYVSTPFFNAEGGRLPA FFQNLLPEGPLRRHLEELRGCGPGDHFDLLAACGTDLPGNVYAYPAHLDADALAAVVTQHNDALEMSVTADPLPEATSLS GVQPKLALVAQHGRYVARTRDVQGTHIIAKLPTVEYALLPEVEELSLRLAQAAGADVCAAWLAPLEQIVAEQPFVLGESR HFLVVRRFDRGPGGHIHCEDFAQILRIQPEEKYTHPAATYATMASTLRGGMGLGQRGEAAAEELIRRAMVNEMLGNYDAH VKNFGVLYRDGRTPELSPAYDVVAYAAYLGGRGHALRFVPGGEKQARLTPQTVRSFCNATGMFETRVRGVLNDAVGKACA SWPSLIEASSLLDKQKHNLLRHFEACDAVQSWRRRRAGSAGRKAVAP
Specific function: Unbalanced Or Excessive Expression Of Hipa Is Toxic To The Cell. [C]
COG id: COG3550
COG function: function code R; Uncharacterized protein related to capsule biosynthesis enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli hipA, H.influenzae HI_0665 and y4mE [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012893 - InterPro: IPR012894 - InterPro: IPR017508 [H]
Pfam domain/function: PF07804 HipA_C; PF07805 HipA_N [H]
EC number: NA
Molecular weight: Translated: 48895; Mature: 48895
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVLALDIYVGSLRAGLLFQYGTGSTALTRFIPDPSFWSRPDAPVLSWAATDDDPQRREI CCEEEEEEEEHHHHHCEEEEECCCCHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHH FWRSYVSTPFFNAEGGRLPAFFQNLLPEGPLRRHLEELRGCGPGDHFDLLAACGTDLPGN HHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCC VYAYPAHLDADALAAVVTQHNDALEMSVTADPLPEATSLSGVQPKLALVAQHGRYVARTR EEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEHCC DVQGTHIIAKLPTVEYALLPEVEELSLRLAQAAGADVCAAWLAPLEQIVAEQPFVLGESR CCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEECCCC HFLVVRRFDRGPGGHIHCEDFAQILRIQPEEKYTHPAATYATMASTLRGGMGLGQRGEAA CEEEEEEECCCCCCCEEHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHH AEELIRRAMVNEMLGNYDAHVKNFGVLYRDGRTPELSPAYDVVAYAAYLGGRGHALRFVP HHHHHHHHHHHHHHCCCCHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEECC GGEKQARLTPQTVRSFCNATGMFETRVRGVLNDAVGKACASWPSLIEASSLLDKQKHNLL CCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHFEACDAVQSWRRRRAGSAGRKAVAP HHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNVLALDIYVGSLRAGLLFQYGTGSTALTRFIPDPSFWSRPDAPVLSWAATDDDPQRREI CCEEEEEEEEHHHHHCEEEEECCCCHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHH FWRSYVSTPFFNAEGGRLPAFFQNLLPEGPLRRHLEELRGCGPGDHFDLLAACGTDLPGN HHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCC VYAYPAHLDADALAAVVTQHNDALEMSVTADPLPEATSLSGVQPKLALVAQHGRYVARTR EEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEHCC DVQGTHIIAKLPTVEYALLPEVEELSLRLAQAAGADVCAAWLAPLEQIVAEQPFVLGESR CCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEECCCC HFLVVRRFDRGPGGHIHCEDFAQILRIQPEEKYTHPAATYATMASTLRGGMGLGQRGEAA CEEEEEEECCCCCCCEEHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHH AEELIRRAMVNEMLGNYDAHVKNFGVLYRDGRTPELSPAYDVVAYAAYLGGRGHALRFVP HHHHHHHHHHHHHHCCCCHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEECC GGEKQARLTPQTVRSFCNATGMFETRVRGVLNDAVGKACASWPSLIEASSLLDKQKHNLL CCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHFEACDAVQSWRRRRAGSAGRKAVAP HHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]