| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788508
Identifier: 91788508
GI number: 91788508
Start: 2785317
End: 2786117
Strand: Reverse
Name: 91788508
Synonym: Bpro_2646
Alternate gene names: NA
Gene position: 2786117-2785317 (Counterclockwise)
Preceding gene: 91788509
Following gene: 91788507
Centisome position: 53.58
GC content: 64.04
Gene sequence:
>801_bases ATGCAAATACGTGACTGGTTATGTGTCGGGGTTGTCGGGCTGTTCATTGGGGGCTGCGCGGGAATGCTCGGTGGTGTGAC CCCGGAGACAAGATCTGCAGTAGCGCCGACGGGCAAGCTCCGGGTCGCATTCCTCTCGGCGCCGATCTATGCGACCAAGG ATTCCGCGACAGGCGAGCTCAAAGGTGTTGCGGTCGATCTCGGGAAGGAACTCGCGCGCCGAGTGGGCGTGCCGTTCCAG CCGGTCGTTTATCCCAACCCGCCCGCGCTGCTCGGCGGCGCGAAGTCCGGCGAATGGGACGTTGCGCTGACGGGAATCAA TGCCGAGCGCGCGGCGGTGATGGATTTTTCGGCGCCTTACATGGAAGTCGAACAGGGTTACCTTGTTCGCGCCGGTGTCA CTATCGCCAGGGCGTCGGACGTGGACAAGGCCGGGATCCGGATCGGGGTACTCGAAAAATCTGGCGCCGACCTCCATCTT TCAAACTCTCTGAAGGATGCGGCGCTGGTCCGCGTCAAGAGCCTCCCCGAGAACTATGCCCTGCTGGATACCGGAAAGGC CGACGTGATTGCCGCTACCAAAACGGCTCTCTTCGAAGGGGCCGCGAGCCGGCCGGGCTCACGGGTTCTCGACGGCCGGA TTCTGGTCGAGCCGATCAGCATGGGCGTGCCCAAGGGGCGCAATGCCGCCGCTGCTGTGTACGTCGGCCAGTTCGTCGAG GAGGCGAAAGCGGCGGGGCTGGTCAAGTCCGCGATCGAGCGGGCCGGCCTGCGCGGCGTAGTCGTCGCTCCACTTAAATG A
Upstream 100 bases:
>100_bases CGGTGGGGCACACTGGGGAGCTCCGTCTTGGTCTGTAGCCTCGTTGGCCGCCGCTCACCTCAATTCGTTGAGAGCAACGG TAACTTCAGAGGAGGACGCC
Downstream 100 bases:
>100_bases GGCGCGTTCGGGCAGCACCAACGAGGAGGAAGCATTGAGAAGAAATACGCTCATCCCGCTTGAGGCCGCGTCAGGTCGTC CAGCGTCACCCAGCGTCACC
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MQIRDWLCVGVVGLFIGGCAGMLGGVTPETRSAVAPTGKLRVAFLSAPIYATKDSATGELKGVAVDLGKELARRVGVPFQ PVVYPNPPALLGGAKSGEWDVALTGINAERAAVMDFSAPYMEVEQGYLVRAGVTIARASDVDKAGIRIGVLEKSGADLHL SNSLKDAALVRVKSLPENYALLDTGKADVIAATKTALFEGAASRPGSRVLDGRILVEPISMGVPKGRNAAAAVYVGQFVE EAKAAGLVKSAIERAGLRGVVVAPLK
Sequences:
>Translated_266_residues MQIRDWLCVGVVGLFIGGCAGMLGGVTPETRSAVAPTGKLRVAFLSAPIYATKDSATGELKGVAVDLGKELARRVGVPFQ PVVYPNPPALLGGAKSGEWDVALTGINAERAAVMDFSAPYMEVEQGYLVRAGVTIARASDVDKAGIRIGVLEKSGADLHL SNSLKDAALVRVKSLPENYALLDTGKADVIAATKTALFEGAASRPGSRVLDGRILVEPISMGVPKGRNAAAAVYVGQFVE EAKAAGLVKSAIERAGLRGVVVAPLK >Mature_266_residues MQIRDWLCVGVVGLFIGGCAGMLGGVTPETRSAVAPTGKLRVAFLSAPIYATKDSATGELKGVAVDLGKELARRVGVPFQ PVVYPNPPALLGGAKSGEWDVALTGINAERAAVMDFSAPYMEVEQGYLVRAGVTIARASDVDKAGIRIGVLEKSGADLHL SNSLKDAALVRVKSLPENYALLDTGKADVIAATKTALFEGAASRPGSRVLDGRILVEPISMGVPKGRNAAAAVYVGQFVE EAKAAGLVKSAIERAGLRGVVVAPLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27506; Mature: 27506
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIRDWLCVGVVGLFIGGCAGMLGGVTPETRSAVAPTGKLRVAFLSAPIYATKDSATGEL CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCCE KGVAVDLGKELARRVGVPFQPVVYPNPPALLGGAKSGEWDVALTGINAERAAVMDFSAPY EEEEEHHHHHHHHHCCCCCCCEECCCCCCEECCCCCCCEEEEEECCCCCCEEEEECCCCC MEVEQGYLVRAGVTIARASDVDKAGIRIGVLEKSGADLHLSNSLKDAALVRVKSLPENYA EECCCCEEEECCEEEEECCCCCCCCEEEEEEECCCCCEEECCCCCHHHHHHHHCCCCCEE LLDTGKADVIAATKTALFEGAASRPGSRVLDGRILVEPISMGVPKGRNAAAAVYVGQFVE EEECCCCCEEEHHHHHHHCCCCCCCCCEEECCEEEEEEHHCCCCCCCCCCHHHHHHHHHH EAKAAGLVKSAIERAGLRGVVVAPLK HHHHHHHHHHHHHHCCCCEEEEECCC >Mature Secondary Structure MQIRDWLCVGVVGLFIGGCAGMLGGVTPETRSAVAPTGKLRVAFLSAPIYATKDSATGEL CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCCE KGVAVDLGKELARRVGVPFQPVVYPNPPALLGGAKSGEWDVALTGINAERAAVMDFSAPY EEEEEHHHHHHHHHCCCCCCCEECCCCCCEECCCCCCCEEEEEECCCCCCEEEEECCCCC MEVEQGYLVRAGVTIARASDVDKAGIRIGVLEKSGADLHLSNSLKDAALVRVKSLPENYA EECCCCEEEECCEEEEECCCCCCCCEEEEEEECCCCCEEECCCCCHHHHHHHHCCCCCEE LLDTGKADVIAATKTALFEGAASRPGSRVLDGRILVEPISMGVPKGRNAAAAVYVGQFVE EEECCCCCEEEHHHHHHHCCCCCCCCCEEECCEEEEEEHHCCCCCCCCCCHHHHHHHHHH EAKAAGLVKSAIERAGLRGVVVAPLK HHHHHHHHHHHHHHCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA