| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is engA
Identifier: 91788466
GI number: 91788466
Start: 2733911
End: 2735254
Strand: Reverse
Name: engA
Synonym: Bpro_2604
Alternate gene names: 91788466
Gene position: 2735254-2733911 (Counterclockwise)
Preceding gene: 91788467
Following gene: 91788465
Centisome position: 52.6
GC content: 59.45
Gene sequence:
>1344_bases ATGAAACCTGTCATTGCGTTAGTCGGCCGCCCGAATGTGGGCAAGTCGACGATTTTCAACCGGCTGACCAAGACGCGGGA TGCGATCGTGGCCGATTTCGCCGGGCTGACGCGTGACCGTCATTACGGCAATGGCAAGTTGGGCTCCCACGAGTACATCG TCATTGACACCGGCGGGTTTGAGCCCGATGCCGCGTCCGGCATATACAAGGAAATGGCCAAGCAGACCCGTCAGGCCGTT GCTGAAGCCGATGTGGTGATTTTCGTGGTCGACGCGCGTGCCGGCATCAGCGCGCAGGACCACGATATCGCCAACTTCCT GCGCAAGCTGGGCAAGCCGACGGTGCTGACCGCCAACAAGGCGGAGGGCATGACGGAAGGCGTCCAGTTCTCCGAATTTT TTGAATTGGGCCTGGGCGAAGTGCTGCCCGTTTCGGCATCCCATGGCCAGGGCATGCGTTCCCTGGTCGATCTTGCCTTG GCGCCGCTCCATCTCGCCGATCCTGATGAAGAAGCCGAGCCGCAAGACCCGTCCGTCATCCGGCTCGCTGTGGCGGGCCG TCCCAATGTGGGGAAATCCACGCTGATCAATACATGGCTGGGGGAAGAGCGCCTGGTGTCCTTCGACCTTCCTGGCACCA CCCGGGATGCCATTTCCGTGCCCTTTGAGCGTGCCGGTCAGAAGTTTGAATTGATTGACACCGCCGGTCTGCGCCGCAAA GGCAAGGTTTTTGAAGCCATCGAGAAGTTTTCCGTCGTCAAGACGCTTCAGGCGATTGAAGGTGCGAACGTCGTGCTGTT GCTGCTCGACGCCACGCAGGGCGTGACCGACCAGGATGCACATATTGCCGGGTATATCCTTGAAAGTGGTCGTGCGGTGG TGCTGGCCATCAACAAATGGGATGCGGTGGATGCCTACCAGCGGGAGACGCTGGAGCGGTCGATCGAGACCCGCCTTGCT TTCCTGAAATTTGCATCCATCCACAAGATTTCGGCGATCAAGCGCCAGGGATTGGCTCCCGTCTGGAAATCAATTGTGCA GGCCCACGCTTCGGCCAACCGCAAAATGTCCACCCCCGTGCTCACACGCCTGCTGCTTGAGGCCGTCCAGTTCCAGCAGC CGCAGCGTTCGGGTATGTTCCGCCCCAAGATGCGCTATGCGCACCAGGGCGGCATGAATCCGCCCATCATCATCATTCAT GGCAATTCGCTGGAGCATGTCACCGAAGCCTACAAACGCTATCTGGAAGGGCGGTTCCGCAAGGAGTTCGATCTGGTCGG CACGCCTATGCGCATCCAGATGAAAAGCTCGCACAACCCCTTCACGGACAAGGATTCGGCCTAA
Upstream 100 bases:
>100_bases CGGCAACACGCTGATCGCCGTGACCCACAACGGTGGGGTTTACGGTTTCAAGCCTGAGTAAACGAAATACACGAAATACA ACCTTTCCAGAAGCTGATCG
Downstream 100 bases:
>100_bases AACTACAGGCTGGACGTACCGGCTGTGGTAAGGTCAAGTTCTATTAACTTTTGAACACGGAAAATATCGTGAGCAATAAC AAAGGTCAGCTGCTGCAGGA
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MKPVIALVGRPNVGKSTIFNRLTKTRDAIVADFAGLTRDRHYGNGKLGSHEYIVIDTGGFEPDAASGIYKEMAKQTRQAV AEADVVIFVVDARAGISAQDHDIANFLRKLGKPTVLTANKAEGMTEGVQFSEFFELGLGEVLPVSASHGQGMRSLVDLAL APLHLADPDEEAEPQDPSVIRLAVAGRPNVGKSTLINTWLGEERLVSFDLPGTTRDAISVPFERAGQKFELIDTAGLRRK GKVFEAIEKFSVVKTLQAIEGANVVLLLLDATQGVTDQDAHIAGYILESGRAVVLAINKWDAVDAYQRETLERSIETRLA FLKFASIHKISAIKRQGLAPVWKSIVQAHASANRKMSTPVLTRLLLEAVQFQQPQRSGMFRPKMRYAHQGGMNPPIIIIH GNSLEHVTEAYKRYLEGRFRKEFDLVGTPMRIQMKSSHNPFTDKDSA
Sequences:
>Translated_447_residues MKPVIALVGRPNVGKSTIFNRLTKTRDAIVADFAGLTRDRHYGNGKLGSHEYIVIDTGGFEPDAASGIYKEMAKQTRQAV AEADVVIFVVDARAGISAQDHDIANFLRKLGKPTVLTANKAEGMTEGVQFSEFFELGLGEVLPVSASHGQGMRSLVDLAL APLHLADPDEEAEPQDPSVIRLAVAGRPNVGKSTLINTWLGEERLVSFDLPGTTRDAISVPFERAGQKFELIDTAGLRRK GKVFEAIEKFSVVKTLQAIEGANVVLLLLDATQGVTDQDAHIAGYILESGRAVVLAINKWDAVDAYQRETLERSIETRLA FLKFASIHKISAIKRQGLAPVWKSIVQAHASANRKMSTPVLTRLLLEAVQFQQPQRSGMFRPKMRYAHQGGMNPPIIIIH GNSLEHVTEAYKRYLEGRFRKEFDLVGTPMRIQMKSSHNPFTDKDSA >Mature_447_residues MKPVIALVGRPNVGKSTIFNRLTKTRDAIVADFAGLTRDRHYGNGKLGSHEYIVIDTGGFEPDAASGIYKEMAKQTRQAV AEADVVIFVVDARAGISAQDHDIANFLRKLGKPTVLTANKAEGMTEGVQFSEFFELGLGEVLPVSASHGQGMRSLVDLAL APLHLADPDEEAEPQDPSVIRLAVAGRPNVGKSTLINTWLGEERLVSFDLPGTTRDAISVPFERAGQKFELIDTAGLRRK GKVFEAIEKFSVVKTLQAIEGANVVLLLLDATQGVTDQDAHIAGYILESGRAVVLAINKWDAVDAYQRETLERSIETRLA FLKFASIHKISAIKRQGLAPVWKSIVQAHASANRKMSTPVLTRLLLEAVQFQQPQRSGMFRPKMRYAHQGGMNPPIIIIH GNSLEHVTEAYKRYLEGRFRKEFDLVGTPMRIQMKSSHNPFTDKDSA
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain
Homologues:
Organism=Escherichia coli, GI87082120, Length=468, Percent_Identity=48.7179487179487, Blast_Score=459, Evalue=1e-130, Organism=Escherichia coli, GI1788919, Length=150, Percent_Identity=31.3333333333333, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI2367268, Length=93, Percent_Identity=37.6344086021505, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323665, Length=144, Percent_Identity=29.8611111111111, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DER_POLSJ (Q12AC2)
Other databases:
- EMBL: CP000316 - RefSeq: YP_549418.1 - ProteinModelPortal: Q12AC2 - STRING: Q12AC2 - GeneID: 4014753 - GenomeReviews: CP000316_GR - KEGG: pol:Bpro_2604 - NMPDR: fig|296591.1.peg.320 - eggNOG: COG1160 - HOGENOM: HBG592135 - OMA: TRDRTYQ - PhylomeDB: Q12AC2 - ProtClustDB: PRK00093 - BioCyc: PSP296591:BPRO_2604-MONOMER - GO: GO:0005622 - HAMAP: MF_00195 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 - Gene3D: G3DSA:3.30.300.20 - PIRSF: PIRSF006485 - PRINTS: PR00326 - TIGRFAMs: TIGR03594 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 49145; Mature: 49145
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPVIALVGRPNVGKSTIFNRLTKTRDAIVADFAGLTRDRHYGNGKLGSHEYIVIDTGGF CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCC EPDAASGIYKEMAKQTRQAVAEADVVIFVVDARAGISAQDHDIANFLRKLGKPTVLTANK CCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCC AEGMTEGVQFSEFFELGLGEVLPVSASHGQGMRSLVDLALAPLHLADPDEEAEPQDPSVI CCCCCCCCHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE RLAVAGRPNVGKSTLINTWLGEERLVSFDLPGTTRDAISVPFERAGQKFELIDTAGLRRK EEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCCHHEECCHHHCCCEEEEEECCCCCCC GKVFEAIEKFSVVKTLQAIEGANVVLLLLDATQGVTDQDAHIAGYILESGRAVVLAINKW CHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCEEEEEECCC DAVDAYQRETLERSIETRLAFLKFASIHKISAIKRQGLAPVWKSIVQAHASANRKMSTPV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHH LTRLLLEAVQFQQPQRSGMFRPKMRYAHQGGMNPPIIIIHGNSLEHVTEAYKRYLEGRFR HHHHHHHHHHHCCHHHCCCCCHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH KEFDLVGTPMRIQMKSSHNPFTDKDSA HHHHHCCCCEEEEEECCCCCCCCCCCC >Mature Secondary Structure MKPVIALVGRPNVGKSTIFNRLTKTRDAIVADFAGLTRDRHYGNGKLGSHEYIVIDTGGF CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCC EPDAASGIYKEMAKQTRQAVAEADVVIFVVDARAGISAQDHDIANFLRKLGKPTVLTANK CCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCC AEGMTEGVQFSEFFELGLGEVLPVSASHGQGMRSLVDLALAPLHLADPDEEAEPQDPSVI CCCCCCCCHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE RLAVAGRPNVGKSTLINTWLGEERLVSFDLPGTTRDAISVPFERAGQKFELIDTAGLRRK EEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCCHHEECCHHHCCCEEEEEECCCCCCC GKVFEAIEKFSVVKTLQAIEGANVVLLLLDATQGVTDQDAHIAGYILESGRAVVLAINKW CHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCEEEEEECCC DAVDAYQRETLERSIETRLAFLKFASIHKISAIKRQGLAPVWKSIVQAHASANRKMSTPV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHH LTRLLLEAVQFQQPQRSGMFRPKMRYAHQGGMNPPIIIIHGNSLEHVTEAYKRYLEGRFR HHHHHHHHHHHCCHHHCCCCCHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH KEFDLVGTPMRIQMKSSHNPFTDKDSA HHHHHCCCCEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA