| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is hflX [H]
Identifier: 91788464
GI number: 91788464
Start: 2732413
End: 2733573
Strand: Reverse
Name: hflX [H]
Synonym: Bpro_2602
Alternate gene names: 91788464
Gene position: 2733573-2732413 (Counterclockwise)
Preceding gene: 91788465
Following gene: 91788463
Centisome position: 52.57
GC content: 60.47
Gene sequence:
>1161_bases GTGAAAACACCAACTCTTGCCCTGCTGGTTGGCGTTGATCTGGGTTTGCCGAACTTTGATGCCGATCTGCAGGAACTGGG TTTGCTCGCGCAAACCGCAGGCCTGCAGCCCGTTGCACGCGTGACGTGCAGGCGAAAAGCCCCCGATGCAGCCCTGTTCA TAGGTTCTGGCAAGGCCGACGAGATCAAAATGCTGGCGCTGGATACTGGCGCGTCTGAAATCCTGTTCGACCAGTCGCTC AGTCCGGCCCAGCAACGCAACCTGGAGCGGCATCTGGAGTTGCCGGTCAATGATCGCACCCTGCTGATTCTCGAGATTTT TGCCCAGCGCGCCCACAGCCACGAGGGCAAGCTTCAGGTCGAACTGGCCCGGCTGCAGTACGTCTCAACGCGCCTCGTGC GCCGCTGGTCTCACCTGGAGCGCCAGACCGGCGGGGCGGGTGTGCGCGGCGGCCCCGGCGAAAAGCAGATTGAACTGGAC AAGCGCATGATCGGCGACGCCATCAAGCGCACCAAGGAGCGTCTGGGCAAGGTCAAGAAGCAGCGGCAAACGCAGCGAAA GCAGCGTGAGCGGCGCAACTCGTTCACGATCTCGCTGGTCGGCTACACCAATGCCGGTAAATCCACGTTGTTCAATGCGC TGGTCAAGGCACGCGCCTACGCTGCCGACCAGCTTTTTGCCACCCTCGATACCACGACGAGACAACTCTACCTGGGTGAC GCCGCACGTTCGGTCTCCCTCTCTGACACGGTAGGCTTCATCCGGGATTTGCCACACGGGCTGATTGACGCGTTTGCCGC TACATTGCAGGAAGCTGCGGACGCGGACCTGCTGCTGCATGTGGTGGATGGTTCGAACCCCGACTATCTGGAGCAAATTG AGCAAGTGCAACGGGTCCTGGCAGAAATTGGCGCGGCTGACGTGCCGCAGATTCTCGTGTTCAACAAGCTGGATGCTGTT GAGAAGGGCAACTCACCTCTGTCCTTGCGCGACATGTTCGAACTCAGGGATGCATTTGAGGGGGCGAGCCGGAGCGTGGA CCGCGTATTTGTCAGCGCGCTGACGGGTGAGGGCCTGCCTTTGCTGCGTGAGCTTCTGGCCAGTCATGTGGCAAGCATGG TGACCGGAGAAATTCTCCAAACAGCCGACGACCTTGCCTGA
Upstream 100 bases:
>100_bases ACAAGCATGCGATCTCAACCATCGTTCCCGGACGCGCTGTGAGTTTTGCGACCGGCGAATCCGAAGAAAGCCCCGCCAGC TGAGTTCCTATGATGCTCCG
Downstream 100 bases:
>100_bases TCGGGCAATTTCATTAGGCACAATGTCGGTGTAGTCAAAAATAAGCGAGTTTGATCCCATGAACCTGAATCCCGTGCTGC AGACGTTGACGACCTTGCCA
Product: GTP-binding protein, HSR1-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MKTPTLALLVGVDLGLPNFDADLQELGLLAQTAGLQPVARVTCRRKAPDAALFIGSGKADEIKMLALDTGASEILFDQSL SPAQQRNLERHLELPVNDRTLLILEIFAQRAHSHEGKLQVELARLQYVSTRLVRRWSHLERQTGGAGVRGGPGEKQIELD KRMIGDAIKRTKERLGKVKKQRQTQRKQRERRNSFTISLVGYTNAGKSTLFNALVKARAYAADQLFATLDTTTRQLYLGD AARSVSLSDTVGFIRDLPHGLIDAFAATLQEAADADLLLHVVDGSNPDYLEQIEQVQRVLAEIGAADVPQILVFNKLDAV EKGNSPLSLRDMFELRDAFEGASRSVDRVFVSALTGEGLPLLRELLASHVASMVTGEILQTADDLA
Sequences:
>Translated_386_residues MKTPTLALLVGVDLGLPNFDADLQELGLLAQTAGLQPVARVTCRRKAPDAALFIGSGKADEIKMLALDTGASEILFDQSL SPAQQRNLERHLELPVNDRTLLILEIFAQRAHSHEGKLQVELARLQYVSTRLVRRWSHLERQTGGAGVRGGPGEKQIELD KRMIGDAIKRTKERLGKVKKQRQTQRKQRERRNSFTISLVGYTNAGKSTLFNALVKARAYAADQLFATLDTTTRQLYLGD AARSVSLSDTVGFIRDLPHGLIDAFAATLQEAADADLLLHVVDGSNPDYLEQIEQVQRVLAEIGAADVPQILVFNKLDAV EKGNSPLSLRDMFELRDAFEGASRSVDRVFVSALTGEGLPLLRELLASHVASMVTGEILQTADDLA >Mature_386_residues MKTPTLALLVGVDLGLPNFDADLQELGLLAQTAGLQPVARVTCRRKAPDAALFIGSGKADEIKMLALDTGASEILFDQSL SPAQQRNLERHLELPVNDRTLLILEIFAQRAHSHEGKLQVELARLQYVSTRLVRRWSHLERQTGGAGVRGGPGEKQIELD KRMIGDAIKRTKERLGKVKKQRQTQRKQRERRNSFTISLVGYTNAGKSTLFNALVKARAYAADQLFATLDTTTRQLYLGD AARSVSLSDTVGFIRDLPHGLIDAFAATLQEAADADLLLHVVDGSNPDYLEQIEQVQRVLAEIGAADVPQILVFNKLDAV EKGNSPLSLRDMFELRDAFEGASRSVDRVFVSALTGEGLPLLRELLASHVASMVTGEILQTADDLA
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310133118, Length=257, Percent_Identity=36.1867704280156, Blast_Score=115, Evalue=7e-26, Organism=Homo sapiens, GI310133116, Length=202, Percent_Identity=39.6039603960396, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI310124269, Length=183, Percent_Identity=40.9836065573771, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI310124267, Length=183, Percent_Identity=40.9836065573771, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI310124171, Length=183, Percent_Identity=40.9836065573771, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI310124169, Length=183, Percent_Identity=40.9836065573771, Blast_Score=114, Evalue=1e-25, Organism=Escherichia coli, GI1790615, Length=359, Percent_Identity=50.974930362117, Blast_Score=326, Evalue=2e-90, Organism=Caenorhabditis elegans, GI17561038, Length=305, Percent_Identity=33.7704918032787, Blast_Score=128, Evalue=6e-30, Organism=Drosophila melanogaster, GI24650079, Length=286, Percent_Identity=34.6153846153846, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI20129375, Length=145, Percent_Identity=37.2413793103448, Blast_Score=66, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 42322; Mature: 42322
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTPTLALLVGVDLGLPNFDADLQELGLLAQTAGLQPVARVTCRRKAPDAALFIGSGKAD CCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCC EIKMLALDTGASEILFDQSLSPAQQRNLERHLELPVNDRTLLILEIFAQRAHSHEGKLQV CEEEEEEECCCHHHHHCCCCCHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEE ELARLQYVSTRLVRRWSHLERQTGGAGVRGGPGEKQIELDKRMIGDAIKRTKERLGKVKK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QRQTQRKQRERRNSFTISLVGYTNAGKSTLFNALVKARAYAADQLFATLDTTTRQLYLGD HHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC AARSVSLSDTVGFIRDLPHGLIDAFAATLQEAADADLLLHVVDGSNPDYLEQIEQVQRVL HHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHH AEIGAADVPQILVFNKLDAVEKGNSPLSLRDMFELRDAFEGASRSVDRVFVSALTGEGLP HHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LLRELLASHVASMVTGEILQTADDLA HHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTPTLALLVGVDLGLPNFDADLQELGLLAQTAGLQPVARVTCRRKAPDAALFIGSGKAD CCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCC EIKMLALDTGASEILFDQSLSPAQQRNLERHLELPVNDRTLLILEIFAQRAHSHEGKLQV CEEEEEEECCCHHHHHCCCCCHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEE ELARLQYVSTRLVRRWSHLERQTGGAGVRGGPGEKQIELDKRMIGDAIKRTKERLGKVKK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QRQTQRKQRERRNSFTISLVGYTNAGKSTLFNALVKARAYAADQLFATLDTTTRQLYLGD HHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC AARSVSLSDTVGFIRDLPHGLIDAFAATLQEAADADLLLHVVDGSNPDYLEQIEQVQRVL HHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHH AEIGAADVPQILVFNKLDAVEKGNSPLSLRDMFELRDAFEGASRSVDRVFVSALTGEGLP HHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LLRELLASHVASMVTGEILQTADDLA HHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]