| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is hflK [H]
Identifier: 91788463
GI number: 91788463
Start: 2730930
End: 2732354
Strand: Reverse
Name: hflK [H]
Synonym: Bpro_2601
Alternate gene names: 91788463
Gene position: 2732354-2730930 (Counterclockwise)
Preceding gene: 91788464
Following gene: 91788462
Centisome position: 52.54
GC content: 61.47
Gene sequence:
>1425_bases ATGAACCTGAATCCCGTGCTGCAGACGTTGACGACCTTGCCAGGTCGGCTGAAACAACGCGCCCAAGGCATGTTCAATCT CAACGATCCACGTTGGGGCCGCGACGATGACAAGCCCTCATCCGATGAGACCAAGCCAGACATGCCTCGTGACGACAAGC AGCCTTCCAGGCCAGTTCGACCACAAGGCCAGGGGCCCAATCAGGGGCCACCTGACCTGGACGAACTCTGGCGCGATTTC AATCGCAAGCTCGGCGGCCTCTTTGGCGGCGCAAAAAGCGCCGGCAAGCGGGGTGGCTTTGGGGGCGGTAACAACGGGGG TGACGGCGGTAATGGCGGTGGTTTTCAGCCCGACATGAAAAGTGCGGGTATCGGCGCGGGCCTGATCGCCGCAGTGGCCG TCCTGATCTGGCTGGGCACCGGGTTTTTCATTGTGCAAGAGGGCCAGCAGGCCGTCATTACTCAGTTCGGCAAATACCAC TCGACCGTGGGCGCGGGTTTCAACTGGCGCCTGCCGTACCCTGTGCAGCGCCATGAAATGGTCGTGGTCACCCAGATAAG GTCGGTTGATGTGGGGCGCGACACCATCATCAAGGCAACAGGACTTCGCGATTCGGCCATGCTGACTGAAGACGAGAACA TTGTCGAAATCAAATTCGCGGTCCAGTACCGTTTGAGTGACGCGCGTGCCTACCTGTTTGAAAGCAAGGACCCGGCCAGC GCCGTGGTGCAGGCTGCCGAAACGGCCGTGCGTGAAGTGGTGGGAAAAATGAAGATGGATTTGGCGCTTGCAGACGAGCG CGACCAGATCGGCCCCCGCGTGCGGGCCCTGATGCAGATCATTCTGGACCGCTACAAGGTGGGTGTTGAAGTCGTGGGCA TCAATCTTCAGCAAAGCGGTGTGCGTCCTCCCGAACAGGTGCAGGCTGCATTCGATGACGTGCTCAGGGCGGGTCAGGAG CGTGAGCGCTCAAAGAACGAAGCCCAAGCCTATGCCAATGATGTGATTCCCCGCGCCGTGGGTTCAGCTTCACGCCTCAA GGAGGAGTCGGAAGCTTACAAGGCGCGAATTGTGGCGCAGGCCCAGGGTGATGCCCAGCGTTTCCGCTCGGTGCTGACCG AATACCAGAAGGCGCCTCAGGTCACCCGCGATCGCATGTACCTGGATGCCATGCAGCAGGTCTACACCAATGTCACCAAG GTGCTGGTGGAGTCCCGCCAGGGCTCCAACCTGCTGTATCTTCCGCTCGACAAGATCATGCAGATGACCGCGCAGGGTGG TGCAGCGGCAGGCGCCGAGATCCCGCTACTGCCGGGCAGTGGAACGGCACCGCCCGCCGCGGCCCCTTCGCCGTCGGGTG GTAGCCTGCCCCTGGATGCCCGTTCACGCGATGCTTCCCGCACCCGCGACCGTGAAACACGCTAA
Upstream 100 bases:
>100_bases GTGACCGGAGAAATTCTCCAAACAGCCGACGACCTTGCCTGATCGGGCAATTTCATTAGGCACAATGTCGGTGTAGTCAA AAATAAGCGAGTTTGATCCC
Downstream 100 bases:
>100_bases GGAAGAAAAACGTGAATAGAGTTGGATTTTTCGTATCTTCATTGCTGGTGGTGCTGGCGCTGCTGAGTTCCACCCTGTTT GTCGTCGACCAGCGTCAGTT
Product: HflK protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MNLNPVLQTLTTLPGRLKQRAQGMFNLNDPRWGRDDDKPSSDETKPDMPRDDKQPSRPVRPQGQGPNQGPPDLDELWRDF NRKLGGLFGGAKSAGKRGGFGGGNNGGDGGNGGGFQPDMKSAGIGAGLIAAVAVLIWLGTGFFIVQEGQQAVITQFGKYH STVGAGFNWRLPYPVQRHEMVVVTQIRSVDVGRDTIIKATGLRDSAMLTEDENIVEIKFAVQYRLSDARAYLFESKDPAS AVVQAAETAVREVVGKMKMDLALADERDQIGPRVRALMQIILDRYKVGVEVVGINLQQSGVRPPEQVQAAFDDVLRAGQE RERSKNEAQAYANDVIPRAVGSASRLKEESEAYKARIVAQAQGDAQRFRSVLTEYQKAPQVTRDRMYLDAMQQVYTNVTK VLVESRQGSNLLYLPLDKIMQMTAQGGAAAGAEIPLLPGSGTAPPAAAPSPSGGSLPLDARSRDASRTRDRETR
Sequences:
>Translated_474_residues MNLNPVLQTLTTLPGRLKQRAQGMFNLNDPRWGRDDDKPSSDETKPDMPRDDKQPSRPVRPQGQGPNQGPPDLDELWRDF NRKLGGLFGGAKSAGKRGGFGGGNNGGDGGNGGGFQPDMKSAGIGAGLIAAVAVLIWLGTGFFIVQEGQQAVITQFGKYH STVGAGFNWRLPYPVQRHEMVVVTQIRSVDVGRDTIIKATGLRDSAMLTEDENIVEIKFAVQYRLSDARAYLFESKDPAS AVVQAAETAVREVVGKMKMDLALADERDQIGPRVRALMQIILDRYKVGVEVVGINLQQSGVRPPEQVQAAFDDVLRAGQE RERSKNEAQAYANDVIPRAVGSASRLKEESEAYKARIVAQAQGDAQRFRSVLTEYQKAPQVTRDRMYLDAMQQVYTNVTK VLVESRQGSNLLYLPLDKIMQMTAQGGAAAGAEIPLLPGSGTAPPAAAPSPSGGSLPLDARSRDASRTRDRETR >Mature_474_residues MNLNPVLQTLTTLPGRLKQRAQGMFNLNDPRWGRDDDKPSSDETKPDMPRDDKQPSRPVRPQGQGPNQGPPDLDELWRDF NRKLGGLFGGAKSAGKRGGFGGGNNGGDGGNGGGFQPDMKSAGIGAGLIAAVAVLIWLGTGFFIVQEGQQAVITQFGKYH STVGAGFNWRLPYPVQRHEMVVVTQIRSVDVGRDTIIKATGLRDSAMLTEDENIVEIKFAVQYRLSDARAYLFESKDPAS AVVQAAETAVREVVGKMKMDLALADERDQIGPRVRALMQIILDRYKVGVEVVGINLQQSGVRPPEQVQAAFDDVLRAGQE RERSKNEAQAYANDVIPRAVGSASRLKEESEAYKARIVAQAQGDAQRFRSVLTEYQKAPQVTRDRMYLDAMQQVYTNVTK VLVESRQGSNLLYLPLDKIMQMTAQGGAAAGAEIPLLPGSGTAPPAAAPSPSGGSLPLDARSRDASRTRDRETR
Specific function: HflC and HflK could encode or regulate a protease [H]
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790616, Length=294, Percent_Identity=36.3945578231293, Blast_Score=204, Evalue=1e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR010201 - InterPro: IPR020980 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7; PF12221 HflK_N [H]
EC number: NA
Molecular weight: Translated: 51470; Mature: 51470
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLNPVLQTLTTLPGRLKQRAQGMFNLNDPRWGRDDDKPSSDETKPDMPRDDKQPSRPVR CCCHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PQGQGPNQGPPDLDELWRDFNRKLGGLFGGAKSAGKRGGFGGGNNGGDGGNGGGFQPDMK CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHH SAGIGAGLIAAVAVLIWLGTGFFIVQEGQQAVITQFGKYHSTVGAGFNWRLPYPVQRHEM HCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE VVVTQIRSVDVGRDTIIKATGLRDSAMLTEDENIVEIKFAVQYRLSDARAYLFESKDPAS EEEEEHHHCCCCCHHEEEECCCCCCCEECCCCCEEEEEEEEEEEHHHHHHEEECCCCHHH AVVQAAETAVREVVGKMKMDLALADERDQIGPRVRALMQIILDRYKVGVEVVGINLQQSG HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHCCEEEEEEEEHHCC VRPPEQVQAAFDDVLRAGQERERSKNEAQAYANDVIPRAVGSASRLKEESEAYKARIVAQ CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH AQGDAQRFRSVLTEYQKAPQVTRDRMYLDAMQQVYTNVTKVLVESRQGSNLLYLPLDKIM CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHH QMTAQGGAAAGAEIPLLPGSGTAPPAAAPSPSGGSLPLDARSRDASRTRDRETR HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC >Mature Secondary Structure MNLNPVLQTLTTLPGRLKQRAQGMFNLNDPRWGRDDDKPSSDETKPDMPRDDKQPSRPVR CCCHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PQGQGPNQGPPDLDELWRDFNRKLGGLFGGAKSAGKRGGFGGGNNGGDGGNGGGFQPDMK CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHH SAGIGAGLIAAVAVLIWLGTGFFIVQEGQQAVITQFGKYHSTVGAGFNWRLPYPVQRHEM HCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE VVVTQIRSVDVGRDTIIKATGLRDSAMLTEDENIVEIKFAVQYRLSDARAYLFESKDPAS EEEEEHHHCCCCCHHEEEECCCCCCCEECCCCCEEEEEEEEEEEHHHHHHEEECCCCHHH AVVQAAETAVREVVGKMKMDLALADERDQIGPRVRALMQIILDRYKVGVEVVGINLQQSG HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHCCEEEEEEEEHHCC VRPPEQVQAAFDDVLRAGQERERSKNEAQAYANDVIPRAVGSASRLKEESEAYKARIVAQ CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH AQGDAQRFRSVLTEYQKAPQVTRDRMYLDAMQQVYTNVTKVLVESRQGSNLLYLPLDKIM CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHH QMTAQGGAAAGAEIPLLPGSGTAPPAAAPSPSGGSLPLDARSRDASRTRDRETR HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]