Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is fadE25 [H]

Identifier: 91788432

GI number: 91788432

Start: 2689518

End: 2691401

Strand: Reverse

Name: fadE25 [H]

Synonym: Bpro_2570

Alternate gene names: 91788432

Gene position: 2691401-2689518 (Counterclockwise)

Preceding gene: 91788433

Following gene: 91788431

Centisome position: 51.76

GC content: 63.32

Gene sequence:

>1884_bases
ATGAGCCTCAGGCCTACCCTTGATTTCCTGCTCTACCAGTGGCTGGATGCCGAGTCGCTGAACCGGCGCGAACGCTTTGC
CGACCATTCGCGCGAGACCTTTGATGCGGTGTTTGACACCTGCGAGCGCATTGCCCGCGAAAAATATGCACCGTTCAATC
GCACCGTCGATACCCAGGAGCCGCGCTTCGATGGCGAAAAAGTCATCCTCCCGCAGGTCACGCACGATGCCCAGAAGGCC
TATGCGGCCTCGGGCATGCTCAGCGCCGCGCAGGACTATGACGTTGGGGGCATGCAGTTGCCCTACACCGTGGAAGCGGC
TGCCAATGCTTTTTTTGCCATGGCCTCGGTCAGCATCGGCTCGGGCATGCTAACCACAGGCAATGCCAATTTGCTGATGG
TGCACGGCACCGACGCGCAAAAGGACGTGTTTGCCAAAAATGAGTTTTCGGGGCGCTTCTCGGGCACCATGTGCCTGTCG
GAGCCGCAGGCCGGTTCGTCCCTCAGTGACGTGGTCACGCGTGCCGTGCCGGATGGCGAGGGCTTTGAAGCCGACCCGCT
CGGCCCGCGCTATCGCCTCAAGGGTAACAAGATGTGGATTTCGGCCGGCGAGCATGAGCTGACTGAAAACATCATTCATC
TGGTGCTGGCCAAGATACCCGGGCCTGACGGAAAGCTGATCCCGGGCACGCGCGGCATTTCGCTGTTCATCGTGCCCAAG
TGGCTGGTGAACGTGGAGAGCCCTCCCCCCGGCCCTCTCCCGGGGGGAGAGGGTGAGAAGGGCAGCGTGAAGGTCACGCT
GGGTCCCAGGAACGACGTGGCGTTGGCGGGCCTGAACCACAAGCTCGGCTGGCGCGGCACGATCAACACCCTGCTCAATT
TCGGTGAAGGCAAGTACCCGGTGAACGGCGAGGCGGGGGCCATCGGCTACTTGGTCGGCAAGCCGCATGAAGGGCTGCGC
TGCATGTTCCACATGATGAACGAGGCGCGCATCGGGGTGGGCACCGCGGCGACCATGCTGGGCATGGCCGGCTACTACGC
CAGCCTGGACTATGCCAAAAACCGGCCGCAGGGCCGGCCCGTCGGCCCCGGCGGCAAGGATGCCGCCCAGCCGCAAATCC
GTATCATCGAGCATGCCGACGTCAAGCGCATGCTGCTGGCGCAAAAGGCCTACTGCGAAGGCGCGTTGGCACTGGAGCTG
TATTGCGCCCGTCTGGTCGACGAACACCATACCGGCGAGCCCCAGGCCGCCGACGACGCGCGCCTGTTGCTGGAAGTGCT
GACGCCCATTGCCAAAAGCTGGCCCAGCGAATGGTGCCTGGAGGCCAACTCGCTGGCCATCCAGGTGCACGGCGGCTACG
GCTATACGCGTGACTTTCCGGTGGAGCAGTACTGGCGCGACAACCGCCTGAACATGATTCACGAAGGCACCCACGGTATC
CAGGCCATGGATTTGCTGGGGCGCAAGGTGCTGATGGAGGGAGGCAGGGGCCTGCAGTTGCTGGGGGAGCGCATCAATGC
CACAGTGGAAAAAGCCATGCGGGTGCCGGAGTTGGCCAGCTATGCCCAGGCGCTGGGCACGGCCCTGCAGCAGGTGGAGA
GCGCCACCCGGGCCGCCTGGGCCAGCGGCAAGGCTGGCGAGGCCCTCGCCAATGCGGTACCCTATATGCAGGGCTTTGGC
CATACTGTGCTGGCTTGGGTCTGGCTCGACGTGGCGCTGGCGGCCTTGGCCGCCGATTCTGCAAAATCGCTAGCTGCCAC
TGTGGGCAGATTGGCGGCCACCCGTTATTTTTATCATTACGAGTTACCCAAAATAGAAGCCTGGCTCCGGGTGGCTGAAA
CGCGCGACCTGACCTGTGCCGACATGCCTGAGGAGGCGTTTTAA

Upstream 100 bases:

>100_bases
AGCTCTGGGCCGTGGCCCAAGGCACGATAGCCCGGCTTCCCGTCAAAGCCAGCCCGACATAACTCCGACCGACATAACCC
CGACCTGGAGATCCGTCGCC

Downstream 100 bases:

>100_bases
TGGCTTTTTTCAAACCGTCGTCCGCAACCGCTTCCAGCAAATCCGTGGCGCGCCTGCAGGGCCTGATCTGGGTCCTGATT
TATGGCGGCCTGCTGACGCT

Product: acyl-CoA dehydrogenase-like protein

Products: 2-butenoyl-CoA; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 627; Mature: 626

Protein sequence:

>627_residues
MSLRPTLDFLLYQWLDAESLNRRERFADHSRETFDAVFDTCERIAREKYAPFNRTVDTQEPRFDGEKVILPQVTHDAQKA
YAASGMLSAAQDYDVGGMQLPYTVEAAANAFFAMASVSIGSGMLTTGNANLLMVHGTDAQKDVFAKNEFSGRFSGTMCLS
EPQAGSSLSDVVTRAVPDGEGFEADPLGPRYRLKGNKMWISAGEHELTENIIHLVLAKIPGPDGKLIPGTRGISLFIVPK
WLVNVESPPPGPLPGGEGEKGSVKVTLGPRNDVALAGLNHKLGWRGTINTLLNFGEGKYPVNGEAGAIGYLVGKPHEGLR
CMFHMMNEARIGVGTAATMLGMAGYYASLDYAKNRPQGRPVGPGGKDAAQPQIRIIEHADVKRMLLAQKAYCEGALALEL
YCARLVDEHHTGEPQAADDARLLLEVLTPIAKSWPSEWCLEANSLAIQVHGGYGYTRDFPVEQYWRDNRLNMIHEGTHGI
QAMDLLGRKVLMEGGRGLQLLGERINATVEKAMRVPELASYAQALGTALQQVESATRAAWASGKAGEALANAVPYMQGFG
HTVLAWVWLDVALAALAADSAKSLAATVGRLAATRYFYHYELPKIEAWLRVAETRDLTCADMPEEAF

Sequences:

>Translated_627_residues
MSLRPTLDFLLYQWLDAESLNRRERFADHSRETFDAVFDTCERIAREKYAPFNRTVDTQEPRFDGEKVILPQVTHDAQKA
YAASGMLSAAQDYDVGGMQLPYTVEAAANAFFAMASVSIGSGMLTTGNANLLMVHGTDAQKDVFAKNEFSGRFSGTMCLS
EPQAGSSLSDVVTRAVPDGEGFEADPLGPRYRLKGNKMWISAGEHELTENIIHLVLAKIPGPDGKLIPGTRGISLFIVPK
WLVNVESPPPGPLPGGEGEKGSVKVTLGPRNDVALAGLNHKLGWRGTINTLLNFGEGKYPVNGEAGAIGYLVGKPHEGLR
CMFHMMNEARIGVGTAATMLGMAGYYASLDYAKNRPQGRPVGPGGKDAAQPQIRIIEHADVKRMLLAQKAYCEGALALEL
YCARLVDEHHTGEPQAADDARLLLEVLTPIAKSWPSEWCLEANSLAIQVHGGYGYTRDFPVEQYWRDNRLNMIHEGTHGI
QAMDLLGRKVLMEGGRGLQLLGERINATVEKAMRVPELASYAQALGTALQQVESATRAAWASGKAGEALANAVPYMQGFG
HTVLAWVWLDVALAALAADSAKSLAATVGRLAATRYFYHYELPKIEAWLRVAETRDLTCADMPEEAF
>Mature_626_residues
SLRPTLDFLLYQWLDAESLNRRERFADHSRETFDAVFDTCERIAREKYAPFNRTVDTQEPRFDGEKVILPQVTHDAQKAY
AASGMLSAAQDYDVGGMQLPYTVEAAANAFFAMASVSIGSGMLTTGNANLLMVHGTDAQKDVFAKNEFSGRFSGTMCLSE
PQAGSSLSDVVTRAVPDGEGFEADPLGPRYRLKGNKMWISAGEHELTENIIHLVLAKIPGPDGKLIPGTRGISLFIVPKW
LVNVESPPPGPLPGGEGEKGSVKVTLGPRNDVALAGLNHKLGWRGTINTLLNFGEGKYPVNGEAGAIGYLVGKPHEGLRC
MFHMMNEARIGVGTAATMLGMAGYYASLDYAKNRPQGRPVGPGGKDAAQPQIRIIEHADVKRMLLAQKAYCEGALALELY
CARLVDEHHTGEPQAADDARLLLEVLTPIAKSWPSEWCLEANSLAIQVHGGYGYTRDFPVEQYWRDNRLNMIHEGTHGIQ
AMDLLGRKVLMEGGRGLQLLGERINATVEKAMRVPELASYAQALGTALQQVESATRAAWASGKAGEALANAVPYMQGFGH
TVLAWVWLDVALAALAADSAKSLAATVGRLAATRYFYHYELPKIEAWLRVAETRDLTCADMPEEAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=445, Percent_Identity=27.1910112359551, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI4557235, Length=374, Percent_Identity=25.1336898395722, Blast_Score=83, Evalue=8e-16,
Organism=Homo sapiens, GI76496475, Length=374, Percent_Identity=25.1336898395722, Blast_Score=83, Evalue=8e-16,
Organism=Homo sapiens, GI7656849, Length=360, Percent_Identity=24.7222222222222, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI226958412, Length=376, Percent_Identity=25.2659574468085, Blast_Score=76, Evalue=8e-14,
Organism=Homo sapiens, GI226958414, Length=376, Percent_Identity=25.2659574468085, Blast_Score=76, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17533517, Length=341, Percent_Identity=24.0469208211144, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17508101, Length=428, Percent_Identity=23.5981308411215, Blast_Score=78, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI86563383, Length=426, Percent_Identity=24.8826291079812, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI86563381, Length=426, Percent_Identity=24.8826291079812, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21356377, Length=411, Percent_Identity=26.7639902676399, Blast_Score=89, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24646207, Length=471, Percent_Identity=24.8407643312102, Blast_Score=77, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: 1.3.99.2

Molecular weight: Translated: 68203; Mature: 68072

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRPTLDFLLYQWLDAESLNRRERFADHSRETFDAVFDTCERIAREKYAPFNRTVDTQE
CCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PRFDGEKVILPQVTHDAQKAYAASGMLSAAQDYDVGGMQLPYTVEAAANAFFAMASVSIG
CCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEECCEEHHHHHHHHHHHHHHHCC
SGMLTTGNANLLMVHGTDAQKDVFAKNEFSGRFSGTMCLSEPQAGSSLSDVVTRAVPDGE
CCEEEECCCCEEEEECCCCCHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCC
GFEADPLGPRYRLKGNKMWISAGEHELTENIIHLVLAKIPGPDGKLIPGTRGISLFIVPK
CCCCCCCCCCEEECCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEE
WLVNVESPPPGPLPGGEGEKGSVKVTLGPRNDVALAGLNHKLGWRGTINTLLNFGEGKYP
EEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCC
VNGEAGAIGYLVGKPHEGLRCMFHMMNEARIGVGTAATMLGMAGYYASLDYAKNRPQGRP
CCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
VGPGGKDAAQPQIRIIEHADVKRMLLAQKAYCEGALALELYCARLVDEHHTGEPQAADDA
CCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHH
RLLLEVLTPIAKSWPSEWCLEANSLAIQVHGGYGYTRDFPVEQYWRDNRLNMIHEGTHGI
HHHHHHHHHHHHCCCHHHCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCEEECCCCCH
QAMDLLGRKVLMEGGRGLQLLGERINATVEKAMRVPELASYAQALGTALQQVESATRAAW
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
ASGKAGEALANAVPYMQGFGHTVLAWVWLDVALAALAADSAKSLAATVGRLAATRYFYHY
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
ELPKIEAWLRVAETRDLTCADMPEEAF
CCCHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLRPTLDFLLYQWLDAESLNRRERFADHSRETFDAVFDTCERIAREKYAPFNRTVDTQE
CCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PRFDGEKVILPQVTHDAQKAYAASGMLSAAQDYDVGGMQLPYTVEAAANAFFAMASVSIG
CCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEECCEEHHHHHHHHHHHHHHHCC
SGMLTTGNANLLMVHGTDAQKDVFAKNEFSGRFSGTMCLSEPQAGSSLSDVVTRAVPDGE
CCEEEECCCCEEEEECCCCCHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCC
GFEADPLGPRYRLKGNKMWISAGEHELTENIIHLVLAKIPGPDGKLIPGTRGISLFIVPK
CCCCCCCCCCEEECCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEE
WLVNVESPPPGPLPGGEGEKGSVKVTLGPRNDVALAGLNHKLGWRGTINTLLNFGEGKYP
EEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCC
VNGEAGAIGYLVGKPHEGLRCMFHMMNEARIGVGTAATMLGMAGYYASLDYAKNRPQGRP
CCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
VGPGGKDAAQPQIRIIEHADVKRMLLAQKAYCEGALALELYCARLVDEHHTGEPQAADDA
CCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHH
RLLLEVLTPIAKSWPSEWCLEANSLAIQVHGGYGYTRDFPVEQYWRDNRLNMIHEGTHGI
HHHHHHHHHHHHCCCHHHCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCEEECCCCCH
QAMDLLGRKVLMEGGRGLQLLGERINATVEKAMRVPELASYAQALGTALQQVESATRAAW
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
ASGKAGEALANAVPYMQGFGHTVLAWVWLDVALAALAADSAKSLAATVGRLAATRYFYHY
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
ELPKIEAWLRVAETRDLTCADMPEEAF
CCCHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: butanoyl-CoA; acceptor

Specific reaction: butanoyl-CoA + acceptor = 2-butenoyl-CoA + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]