| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788428
Identifier: 91788428
GI number: 91788428
Start: 2687599
End: 2688048
Strand: Reverse
Name: 91788428
Synonym: Bpro_2566
Alternate gene names: NA
Gene position: 2688048-2687599 (Counterclockwise)
Preceding gene: 91788429
Following gene: 91788427
Centisome position: 51.69
GC content: 62.0
Gene sequence:
>450_bases ATGAATTTTGGCGCTGAAATCCCTTTCGTTCACCACCTTGGCTTCACGCTGGAGCTGTTTGAAGGCGGTGAATCGGTCCT TGGCTACACGCCGCGGCCCGAACACCTGAACTCGTTTTCCGTCACGCACGGCGGTGCGGTGATGACGCTGATGGACGTGA CCATGGCGACGGCCGCGCGCAGTGTGCAAAAAGACATGGGCGTGGTCACCATCGAAATGAAGACCAGCTTCATGCGGCCC GCACCGGGCGACGGCAGCAAGCTCACGGGCAAGGGCCGGCTCATGCACCGCACCGCCACGATGGCGTTCACCGAAGCCAC GCTGTACGACGACCAGGGCCGTGCTTGCGCACATGCCACCGGTACCTTCAAATACGTCAAGCGCCTGCCGACGGGGCCTG GAGCCGTGAACGGGCTCAATCCGCCTGTCAGTCCCATCTCGACGGATTAA
Upstream 100 bases:
>100_bases TGCCCCCCGAGGGGGCGCATTTTTCCTTGGGGCGGCCCGGCGGAAAAATCGTGGCCATCGCGCTTGTCGCTCCGGGTACT GCACTGCGAGGATTTTTTCA
Downstream 100 bases:
>100_bases ACCTTTTGAGCATCAAATCTGCCTTAAGTACCTGAGGAATATCCGTTATCGGCTGTCAGCTATTAAACCAATAGCATTGA TGGAAATTCCAACATTTTTT
Product: phenylacetic acid degradation-like protein
Products: NA
Alternate protein names: Phenylacetic Acid Degradation-Related Protein; Phenylacetic Acid Degradation-Like Protein; Thioesterase-Related Protein; Thioesterase Superfamily; Thioesterase; Aromatic Compounds Catabolic Protein; Thioesterase Family Protein
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MNFGAEIPFVHHLGFTLELFEGGESVLGYTPRPEHLNSFSVTHGGAVMTLMDVTMATAARSVQKDMGVVTIEMKTSFMRP APGDGSKLTGKGRLMHRTATMAFTEATLYDDQGRACAHATGTFKYVKRLPTGPGAVNGLNPPVSPISTD
Sequences:
>Translated_149_residues MNFGAEIPFVHHLGFTLELFEGGESVLGYTPRPEHLNSFSVTHGGAVMTLMDVTMATAARSVQKDMGVVTIEMKTSFMRP APGDGSKLTGKGRLMHRTATMAFTEATLYDDQGRACAHATGTFKYVKRLPTGPGAVNGLNPPVSPISTD >Mature_149_residues MNFGAEIPFVHHLGFTLELFEGGESVLGYTPRPEHLNSFSVTHGGAVMTLMDVTMATAARSVQKDMGVVTIEMKTSFMRP APGDGSKLTGKGRLMHRTATMAFTEATLYDDQGRACAHATGTFKYVKRLPTGPGAVNGLNPPVSPISTD
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15916; Mature: 15916
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFGAEIPFVHHLGFTLELFEGGESVLGYTPRPEHLNSFSVTHGGAVMTLMDVTMATAAR CCCCCCCCEEECCCCEEEEECCCCEEECCCCCCCCCCEEEECCCCEEEHHHHHHHHHHHH SVQKDMGVVTIEMKTSFMRPAPGDGSKLTGKGRLMHRTATMAFTEATLYDDQGRACAHAT HHHHHCCEEEEEEECCCCCCCCCCCCEECCCCEEEEEEHHEEEEEEEEECCCCCEEECCC GTFKYVKRLPTGPGAVNGLNPPVSPISTD HHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNFGAEIPFVHHLGFTLELFEGGESVLGYTPRPEHLNSFSVTHGGAVMTLMDVTMATAAR CCCCCCCCEEECCCCEEEEECCCCEEECCCCCCCCCCEEEECCCCEEEHHHHHHHHHHHH SVQKDMGVVTIEMKTSFMRPAPGDGSKLTGKGRLMHRTATMAFTEATLYDDQGRACAHAT HHHHHCCEEEEEEECCCCCCCCCCCCEECCCCEEEEEEHHEEEEEEEEECCCCCEEECCC GTFKYVKRLPTGPGAVNGLNPPVSPISTD HHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA