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The map label for this gene is aidB [H]

Identifier: 91788426

GI number: 91788426

Start: 2684700

End: 2686439

Strand: Reverse

Name: aidB [H]

Synonym: Bpro_2564

Alternate gene names: 91788426

Gene position: 2686439-2684700 (Counterclockwise)

Preceding gene: 91788427

Following gene: 91788425

Centisome position: 51.66

GC content: 65.52

Gene sequence:

>1740_bases
ATGGACATCACCCATGAAGTCTTCAACCAGCCGGAGCCGCTGGCGGACTACAACCTGTTCGACACCAACCGCCCCCTGCG
CGACGCGCTGAAGTTCAACGCACCGGCACTGGACACCACCGAGCTGGCAGCCCTGGGCGCCATGCTGGGCAGTACCGGGA
TGCAAACCCACGCGCGCTTGGCCAATATTCATGCCCCGGAGCTGCACAGCCACGACCGCTTTGGCCGACGGCTGGACCAG
GTGGAGTTTCATCCGAGCTATCACGAGTTGATGAAACTCGCGATCGGTGCCGGCTTGCATGGCACCCCTTGGGCCAGCCC
TCACCCTGGCCCTCTCCCAGAGGGAGAGGGAACCGGACACCCTGCGCCAAAGGGGAAGCGAGTCAGACACCCTCTCCCTC
TGGGAGAGGGCAGGGGTGAGGGCCTGTCCCCGCATGTGCTGCGCGCCGCTGGCTTCATGCTCTTTACGGAGCTCGAACCA
TCGGTGCTGTGCCCGATCTCCATGACCTATGCGGTCACGCCGGCGCTGCGCAGCAATGCGGCCATCTATGCCGACTGGGC
TCCCGGGCTCACCGGTCGCGCCTATGACTCTGAACTCAAGCCATGGCAGGGCAAGGCCGGCCTCACCATGGGCATGGGCA
TGACCGAAAAGCAGGGCGGCTCGGATGTGCGGGCCAACACCACCCGGGCCGAGCCCGCGGGCAGTGACGGCTGGGGAGCG
CGTTACACCCTCACGGGCCACAAGTGGTTTTTCTCGGCACCCATGTGCGACGCCTTTCTGGTGCTGGCCCAAACCACCAG
CGGCTTGAGCTGCTTTTTCCTGCCGCGCATTCTTCCCGATGGCAGCCTGAACGCCATCCGCATCCAGCGCCTCAAGGACA
AGCTGGGCAACAAGGCCAATGCCAGTTCAGAAGTAGAGTTCGAGGGTGCCCAGGCCTGGCTGGTGGGTGAAGAAGGCCGC
GGCATTCCGCAAATTCTGGAGATGGGCACCATGACCCGGCTGGACTGCGCCCTGGGCACCAGCGGCCTGATGCGCCAGGC
CCTGAGCCTCGCGCTCAACCACACGTCGCAGCGCAAGGCCTTCGGCAAATTGCTGATAGACCAGCCGCTGATGCGCAATG
TGCTGGCCGACCTGGCGCTCGAATCGGAAGCCGCCACGGCGCTGGCCCTTCGCCTGGCCCGTGCGTTCGACAGGGCTGCC
GACGCGCATGAAGCGGTGATGGCGCGCCTGCTCACCCCGATCGCCAAGTTCTGGATCTGCAAGCGCGGCAGCCACTTTGC
GCAGGAAGCCATGGAATGCCTGGGCGGCAACGGTTATGTGGAGGAGGGCGGTGTTGGCGTCATGGCCCGCATCTACCGCG
AAATGCCGCTGAACTCCATCTGGGAAGGCGCCGGCAACATCATGGCGCTGGACTTGCTGCGCGCCCTGCGCAAGGCCGAT
GCTGTGGCGGCACTGGAGCATGAGCTTTCTGCCGCCAGGGGCGCACATCCGGCGCTGGACCGGCTCGCCGCAGCCTTGCC
CACGCGGGTGGAGCAGATGGCCACGGAACTGGAGGCGCGCCGGCTGGCGCAAGATGTTGCGCTGGCAGTGCAGGCTGCGC
TACTGTTGCAGACAGCACCGGCGCCGGTGTTCAGCGCATTTTGTGACTCGCGCATTTCCGGCAACTGGGGCCAGACCTTC
GGCACGCTGGCTGCAGGCACTGATTTCGACACCATCATCGCCCGGGCCATGCCCCGGTAA

Upstream 100 bases:

>100_bases
CCGCACCAGAGGCCTTCCTCGGTCTGCTCAAGGGCAGAAACTTCGGCAAACAGCTGGTCAAGCTCATTTAGCCTGTAGCC
ATCAGGCCAGGAGTCGTGCC

Downstream 100 bases:

>100_bases
ACACGCAGACCTTCAGGAGACATCCATGCAAGAGCTGATTCTTCATCACTACCCGACTTCGCCTTTCGCCGAGAAAATCC
GGTTGATCCTGGGCTATAAA

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MDITHEVFNQPEPLADYNLFDTNRPLRDALKFNAPALDTTELAALGAMLGSTGMQTHARLANIHAPELHSHDRFGRRLDQ
VEFHPSYHELMKLAIGAGLHGTPWASPHPGPLPEGEGTGHPAPKGKRVRHPLPLGEGRGEGLSPHVLRAAGFMLFTELEP
SVLCPISMTYAVTPALRSNAAIYADWAPGLTGRAYDSELKPWQGKAGLTMGMGMTEKQGGSDVRANTTRAEPAGSDGWGA
RYTLTGHKWFFSAPMCDAFLVLAQTTSGLSCFFLPRILPDGSLNAIRIQRLKDKLGNKANASSEVEFEGAQAWLVGEEGR
GIPQILEMGTMTRLDCALGTSGLMRQALSLALNHTSQRKAFGKLLIDQPLMRNVLADLALESEAATALALRLARAFDRAA
DAHEAVMARLLTPIAKFWICKRGSHFAQEAMECLGGNGYVEEGGVGVMARIYREMPLNSIWEGAGNIMALDLLRALRKAD
AVAALEHELSAARGAHPALDRLAAALPTRVEQMATELEARRLAQDVALAVQAALLLQTAPAPVFSAFCDSRISGNWGQTF
GTLAAGTDFDTIIARAMPR

Sequences:

>Translated_579_residues
MDITHEVFNQPEPLADYNLFDTNRPLRDALKFNAPALDTTELAALGAMLGSTGMQTHARLANIHAPELHSHDRFGRRLDQ
VEFHPSYHELMKLAIGAGLHGTPWASPHPGPLPEGEGTGHPAPKGKRVRHPLPLGEGRGEGLSPHVLRAAGFMLFTELEP
SVLCPISMTYAVTPALRSNAAIYADWAPGLTGRAYDSELKPWQGKAGLTMGMGMTEKQGGSDVRANTTRAEPAGSDGWGA
RYTLTGHKWFFSAPMCDAFLVLAQTTSGLSCFFLPRILPDGSLNAIRIQRLKDKLGNKANASSEVEFEGAQAWLVGEEGR
GIPQILEMGTMTRLDCALGTSGLMRQALSLALNHTSQRKAFGKLLIDQPLMRNVLADLALESEAATALALRLARAFDRAA
DAHEAVMARLLTPIAKFWICKRGSHFAQEAMECLGGNGYVEEGGVGVMARIYREMPLNSIWEGAGNIMALDLLRALRKAD
AVAALEHELSAARGAHPALDRLAAALPTRVEQMATELEARRLAQDVALAVQAALLLQTAPAPVFSAFCDSRISGNWGQTF
GTLAAGTDFDTIIARAMPR
>Mature_579_residues
MDITHEVFNQPEPLADYNLFDTNRPLRDALKFNAPALDTTELAALGAMLGSTGMQTHARLANIHAPELHSHDRFGRRLDQ
VEFHPSYHELMKLAIGAGLHGTPWASPHPGPLPEGEGTGHPAPKGKRVRHPLPLGEGRGEGLSPHVLRAAGFMLFTELEP
SVLCPISMTYAVTPALRSNAAIYADWAPGLTGRAYDSELKPWQGKAGLTMGMGMTEKQGGSDVRANTTRAEPAGSDGWGA
RYTLTGHKWFFSAPMCDAFLVLAQTTSGLSCFFLPRILPDGSLNAIRIQRLKDKLGNKANASSEVEFEGAQAWLVGEEGR
GIPQILEMGTMTRLDCALGTSGLMRQALSLALNHTSQRKAFGKLLIDQPLMRNVLADLALESEAATALALRLARAFDRAA
DAHEAVMARLLTPIAKFWICKRGSHFAQEAMECLGGNGYVEEGGVGVMARIYREMPLNSIWEGAGNIMALDLLRALRKAD
AVAALEHELSAARGAHPALDRLAAALPTRVEQMATELEARRLAQDVALAVQAALLLQTAPAPVFSAFCDSRISGNWGQTF
GTLAAGTDFDTIIARAMPR

Specific function: May help to prevent alkylation damage by protecting DNA and destroying alkylating agents [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=276, Percent_Identity=25.7246376811594, Blast_Score=83, Evalue=7e-16,
Organism=Homo sapiens, GI4557233, Length=278, Percent_Identity=30.5755395683453, Blast_Score=83, Evalue=7e-16,
Organism=Homo sapiens, GI226958414, Length=277, Percent_Identity=25.6317689530686, Blast_Score=83, Evalue=8e-16,
Organism=Homo sapiens, GI4557235, Length=271, Percent_Identity=25.0922509225092, Blast_Score=77, Evalue=6e-14,
Organism=Homo sapiens, GI76496475, Length=271, Percent_Identity=25.0922509225092, Blast_Score=76, Evalue=9e-14,
Organism=Homo sapiens, GI4501857, Length=306, Percent_Identity=28.1045751633987, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI4501859, Length=264, Percent_Identity=27.2727272727273, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI4557231, Length=297, Percent_Identity=25.9259259259259, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI187960098, Length=297, Percent_Identity=25.9259259259259, Blast_Score=71, Evalue=4e-12,
Organism=Homo sapiens, GI4503943, Length=305, Percent_Identity=29.5081967213115, Blast_Score=69, Evalue=2e-11,
Organism=Escherichia coli, GI87082384, Length=547, Percent_Identity=48.6288848263254, Blast_Score=455, Evalue=1e-129,
Organism=Caenorhabditis elegans, GI86563381, Length=487, Percent_Identity=28.7474332648871, Blast_Score=169, Evalue=5e-42,
Organism=Caenorhabditis elegans, GI86563383, Length=487, Percent_Identity=28.7474332648871, Blast_Score=168, Evalue=6e-42,
Organism=Caenorhabditis elegans, GI17538396, Length=284, Percent_Identity=28.169014084507, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17508101, Length=264, Percent_Identity=26.8939393939394, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71985184, Length=276, Percent_Identity=25, Blast_Score=79, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17506239, Length=264, Percent_Identity=25.3787878787879, Blast_Score=75, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17569725, Length=273, Percent_Identity=26.7399267399267, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17505929, Length=286, Percent_Identity=29.020979020979, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17551932, Length=268, Percent_Identity=27.2388059701493, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21355753, Length=268, Percent_Identity=26.4925373134328, Blast_Score=86, Evalue=9e-17,
Organism=Drosophila melanogaster, GI281363737, Length=273, Percent_Identity=24.5421245421245, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21356377, Length=275, Percent_Identity=28.3636363636364, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24660351, Length=287, Percent_Identity=27.8745644599303, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24646207, Length=273, Percent_Identity=24.5421245421245, Blast_Score=66, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M [H]

EC number: NA

Molecular weight: Translated: 62370; Mature: 62370

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: PS00072 ACYL_COA_DH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDITHEVFNQPEPLADYNLFDTNRPLRDALKFNAPALDTTELAALGAMLGSTGMQTHARL
CCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHH
ANIHAPELHSHDRFGRRLDQVEFHPSYHELMKLAIGAGLHGTPWASPHPGPLPEGEGTGH
HHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PAPKGKRVRHPLPLGEGRGEGLSPHVLRAAGFMLFTELEPSVLCPISMTYAVTPALRSNA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCCEECCCHHHHEECHHHHCCC
AIYADWAPGLTGRAYDSELKPWQGKAGLTMGMGMTEKQGGSDVRANTTRAEPAGSDGWGA
EEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RYTLTGHKWFFSAPMCDAFLVLAQTTSGLSCFFLPRILPDGSLNAIRIQRLKDKLGNKAN
EEEEECCCEEECCCHHHHHHHHHHCCCCCEEEEHHHHCCCCCCCHHHHHHHHHHHCCCCC
ASSEVEFEGAQAWLVGEEGRGIPQILEMGTMTRLDCALGTSGLMRQALSLALNHTSQRKA
CCCCEEECCCEEEEECCCCCCHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCHHHHH
FGKLLIDQPLMRNVLADLALESEAATALALRLARAFDRAADAHEAVMARLLTPIAKFWIC
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRGSHFAQEAMECLGGNGYVEEGGVGVMARIYREMPLNSIWEGAGNIMALDLLRALRKAD
CCCCHHHHHHHHHHCCCCEECCCCCHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHH
AVAALEHELSAARGAHPALDRLAAALPTRVEQMATELEARRLAQDVALAVQAALLLQTAP
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
APVFSAFCDSRISGNWGQTFGTLAAGTDFDTIIARAMPR
CHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHCCC
>Mature Secondary Structure
MDITHEVFNQPEPLADYNLFDTNRPLRDALKFNAPALDTTELAALGAMLGSTGMQTHARL
CCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHH
ANIHAPELHSHDRFGRRLDQVEFHPSYHELMKLAIGAGLHGTPWASPHPGPLPEGEGTGH
HHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PAPKGKRVRHPLPLGEGRGEGLSPHVLRAAGFMLFTELEPSVLCPISMTYAVTPALRSNA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCCEECCCHHHHEECHHHHCCC
AIYADWAPGLTGRAYDSELKPWQGKAGLTMGMGMTEKQGGSDVRANTTRAEPAGSDGWGA
EEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RYTLTGHKWFFSAPMCDAFLVLAQTTSGLSCFFLPRILPDGSLNAIRIQRLKDKLGNKAN
EEEEECCCEEECCCHHHHHHHHHHCCCCCEEEEHHHHCCCCCCCHHHHHHHHHHHCCCCC
ASSEVEFEGAQAWLVGEEGRGIPQILEMGTMTRLDCALGTSGLMRQALSLALNHTSQRKA
CCCCEEECCCEEEEECCCCCCHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCHHHHH
FGKLLIDQPLMRNVLADLALESEAATALALRLARAFDRAADAHEAVMARLLTPIAKFWIC
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRGSHFAQEAMECLGGNGYVEEGGVGVMARIYREMPLNSIWEGAGNIMALDLLRALRKAD
CCCCHHHHHHHHHHCCCCEECCCCCHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHH
AVAALEHELSAARGAHPALDRLAAALPTRVEQMATELEARRLAQDVALAVQAALLLQTAP
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
APVFSAFCDSRISGNWGQTFGTLAAGTDFDTIIARAMPR
CHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961409; 7610040; 9278503 [H]