Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788410

Identifier: 91788410

GI number: 91788410

Start: 2669261

End: 2670115

Strand: Direct

Name: 91788410

Synonym: Bpro_2548

Alternate gene names: NA

Gene position: 2669261-2670115 (Clockwise)

Preceding gene: 91788409

Following gene: 91788411

Centisome position: 51.33

GC content: 62.11

Gene sequence:

>855_bases
ATGAGAAACACACGTGCATTGGTGATGATCGCCGTGGCGGTCGTCCTCGCATTTGGAGCAGTCATCGTGGCTGCCCGCTG
GATCAGTGCCCAGGCCTCTGCAGACACCAGCAAGGTTGCGGTGGCAGCGGTTGACATCAGCCTCGGCGCCAGGCTGAGCC
CGGAAATGGTTCGCATGGTCGATTGGCCGGCGAGTGCCATGCCGCCCGGCGCCATCACCGATGCCAAGCAGCTCGAAACG
CGCGTGACGCGCACCAGCATCCAGCGCGGCGAACCCGTCATGGAAGGCAAGCTTGCGCCGCCCGGCACCCAGGGTGGCCT
TTCTGCCGTGGTCGCAGAGGGCAAACGTGCCATGACGGTGCGCGTCAATGATGTGGTGGGCGTAGCCGGGTTTGCCCTGC
CGGGCAACTTTGTGGACATCCTGGTCAATACCCAGGATGAACCAGGAAAAGGCGGCGCGGGCAAGGACCAGACCATTTCG
AAGATCGTGTTGGAGCGCATTCTGGTGCTGGCCATTGCCCAGGAATCAAGTCGCGACGAAACCAAGCCCAAGGTTGTCAA
TGCCGTCACCCTCGAATTGACACCCGACCAGGCAGAAAAACTTGATTTGGCGCGCAGCGTTGGCACCCTCTCGCTGGTTC
TGAGGAACCAGGTCGATCCAAACCCGGTGAATACAAAAGGCGCGACCAAGACAACATTGCTTGATGTCAAGGCCCCCGCG
CCCGAAGCCCGGCCTGCATCCGCGCCGAAGGCCGCAGTAAAGCCCGCGCCCAAGCGGGTGGTCAGGCCTGCACCCGCCAC
CCCAGACCGCGTTGAAGTGATCAAGGGGCTGGAGCGCAGCACCCAACAATTTTAA

Upstream 100 bases:

>100_bases
AAAAAACTCATGCCGGAATCATCAACAGCAGTGATGAATAGATGATGAATAGGTGGTGGACCATGTTGGACTATGTTGGA
CTAAACAGAGGGGGTGAAAA

Downstream 100 bases:

>100_bases
GAAACCGAAGGAGGTATTTGATGAAAACATATTCCACCGGGGCAAGACCGACTTTGTTGGGCGTGGCGCTTGCTGTAGCA
GGCGTGATGGCTGCGTCAAC

Product: Flp pilus assembly CpaB

Products: NA

Alternate protein names: Flp Pilus Assembly CpaB; SAF Domain-Containing Protein; Pilus Assembly Protein CpaB; Pilus Assembly Protein; Pilus Assembly Transmembrane Protein; Flp Pilus Assembly Protein; CtpC Protein; Flp Pilus Assembly Protein CpaB-Like Protein; Flp Pilus Assembly CpaB Domain Protein; Flp Pilus Assembly Protein RcpC/CpaB; CpaB Pilus Assembly Protein; Pilus Assembly-Related Exported Protein; Pilus Assembly Domain-Containing Protein; CpaB2 Pilus Assembly Protein; CpaB Family Protein; CpaB Family Flp Pilus Assembly Protein; CpaB2 Flp Pilus Assembly Protein CpaB; Component Of Type IV Pilus; SAF Domain Protein

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MRNTRALVMIAVAVVLAFGAVIVAARWISAQASADTSKVAVAAVDISLGARLSPEMVRMVDWPASAMPPGAITDAKQLET
RVTRTSIQRGEPVMEGKLAPPGTQGGLSAVVAEGKRAMTVRVNDVVGVAGFALPGNFVDILVNTQDEPGKGGAGKDQTIS
KIVLERILVLAIAQESSRDETKPKVVNAVTLELTPDQAEKLDLARSVGTLSLVLRNQVDPNPVNTKGATKTTLLDVKAPA
PEARPASAPKAAVKPAPKRVVRPAPATPDRVEVIKGLERSTQQF

Sequences:

>Translated_284_residues
MRNTRALVMIAVAVVLAFGAVIVAARWISAQASADTSKVAVAAVDISLGARLSPEMVRMVDWPASAMPPGAITDAKQLET
RVTRTSIQRGEPVMEGKLAPPGTQGGLSAVVAEGKRAMTVRVNDVVGVAGFALPGNFVDILVNTQDEPGKGGAGKDQTIS
KIVLERILVLAIAQESSRDETKPKVVNAVTLELTPDQAEKLDLARSVGTLSLVLRNQVDPNPVNTKGATKTTLLDVKAPA
PEARPASAPKAAVKPAPKRVVRPAPATPDRVEVIKGLERSTQQF
>Mature_284_residues
MRNTRALVMIAVAVVLAFGAVIVAARWISAQASADTSKVAVAAVDISLGARLSPEMVRMVDWPASAMPPGAITDAKQLET
RVTRTSIQRGEPVMEGKLAPPGTQGGLSAVVAEGKRAMTVRVNDVVGVAGFALPGNFVDILVNTQDEPGKGGAGKDQTIS
KIVLERILVLAIAQESSRDETKPKVVNAVTLELTPDQAEKLDLARSVGTLSLVLRNQVDPNPVNTKGATKTTLLDVKAPA
PEARPASAPKAAVKPAPKRVVRPAPATPDRVEVIKGLERSTQQF

Specific function: Unknown

COG id: COG3745

COG function: function code U; Flp pilus assembly protein CpaB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29764; Mature: 29764

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNTRALVMIAVAVVLAFGAVIVAARWISAQASADTSKVAVAAVDISLGARLSPEMVRMV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCHHHHHHC
DWPASAMPPGAITDAKQLETRVTRTSIQRGEPVMEGKLAPPGTQGGLSAVVAEGKRAMTV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEE
RVNDVVGVAGFALPGNFVDILVNTQDEPGKGGAGKDQTISKIVLERILVLAIAQESSRDE
EECCEEEECCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
TKPKVVNAVTLELTPDQAEKLDLARSVGTLSLVLRNQVDPNPVNTKGATKTTLLDVKAPA
CCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEEEEEEECCC
PEARPASAPKAAVKPAPKRVVRPAPATPDRVEVIKGLERSTQQF
CCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRNTRALVMIAVAVVLAFGAVIVAARWISAQASADTSKVAVAAVDISLGARLSPEMVRMV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCHHHHHHC
DWPASAMPPGAITDAKQLETRVTRTSIQRGEPVMEGKLAPPGTQGGLSAVVAEGKRAMTV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEE
RVNDVVGVAGFALPGNFVDILVNTQDEPGKGGAGKDQTISKIVLERILVLAIAQESSRDE
EECCEEEECCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
TKPKVVNAVTLELTPDQAEKLDLARSVGTLSLVLRNQVDPNPVNTKGATKTTLLDVKAPA
CCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEEEEEEECCC
PEARPASAPKAAVKPAPKRVVRPAPATPDRVEVIKGLERSTQQF
CCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA