| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788386
Identifier: 91788386
GI number: 91788386
Start: 2637412
End: 2639628
Strand: Reverse
Name: 91788386
Synonym: Bpro_2523
Alternate gene names: NA
Gene position: 2639628-2637412 (Counterclockwise)
Preceding gene: 91788387
Following gene: 91788383
Centisome position: 50.76
GC content: 61.3
Gene sequence:
>2217_bases ATGTCAAAGAAAAAAAGAAAGATAGCCGGCACATCGACTGCCGGCGAGGCCACGCCCTTGGCAAGGCCAGCCGGGGTACC CGCCGCCGCCGCGCGGAATGACTGGACCGTCATCATTTTTGCCTGCATGCTGTTTCTCGTGGCCGCCATCGGGGCGCCCT ACGAGGAAATGCTGCAGGACACCCTGAAGTCGATCGTCGTTTCATTTGCGGCGCTCGGCGCAGGCCTGCTGTTTTTCTGG CGCCAGCGCCAGCGCCACGAATACTTCCACTGGCATGCCCTGATGGGCTTCCCGCTGGCGCTCATGGCCTACGCGCTGGG CAGCATGGTGTGGTCTCACACCTACCTGGCAGGCGTAGAGGCGATTCGCTGGTTTATTTTCAGCCTGCTGCTGTGGCTGG GCCTGAACACCTTCACCCGGGAAAAGTCACCATCCCTCTTTTGGGGAATCCATGCGGGCGCCGTGGTGGCATCTCTCTGG ACGGCCTTGCAATTCTGGATCGACTTCAGATTTTTTTCTCAGGGGCCCAACCCGGCTTCCACTTTTGTCAACCGCAATTT CTTTGCGGAATATGTCGTCTGCACCCTTCCATTCTCGGCACTGCTGATCGCGCGGGCGGGCAAGCCCCAAGAAATCGCAT GGCTGACCTTCACGACCGCTTTCAACATCGTGGCCTTGCTGATGACGGGAACCCGCTCGGCGCTGGCAACCCTGTGGGTG CTGCTGTTCCTTGTTCTTCCGCTCGCCGGGTTTTTCTATCGCAGGCAACTGGCGTGTTTTGCGTGGAACCTCACCCAGCG CCTGGCCGTGATTGCCCTGCTGCTGGTCACCATCGTTGGATTGGGTTTGATCCATACCGGTAACCCGAAGATTGCTGGAG AACTCAACGGACGGAATGCGCTTGAGCGCGGCATCTTTCGCACCGTCTCTGTCGTTACCGACAGCGATGAATTCAGGACG GGCTCCTTGTCCGTTCGGTTGACCATGTGGAAGGCCACTGGCAGGATGATCCAGGACCGGCCATTGAGCGGTGTAGGCGC CGGAGCCTGGGAGGTCAATGGGCCGCTTTACCAGACTGCCGGCTCGCAGCTTGAGACCGATTACTACGCCCACAACGAAC CTTTGCAGTTGCTGGCGGAGTATGGCCTGGTGGGTTGGCTCGCCCTGGCAGGCTTGTTGGGCTACCTTGGCCTCGCCGCC TGGCGCACCCTTGGCGACCGCCGGCCCGAGGCCATGGATGAGGGGCCTGTGCGTGCCGCGGCGCTCGCCTGTCTGCTGGC ATTGCTGATGGTCAGCAATGCGGGGTTCGCCTGGCGGCTGGCCTCCACTGGCGCGCTTTTTGCCGTATTGCTGGGCCTGC TTGCGGCATCCGATGCGCGGCTGGGCTACCGGGGGTTCAGCGGTGGTTCGCGTTTGCCGTGGCATCCAGTTCTTTCCCGC ACGGCCATGTGGGCCCTGGCGGCGAGCCTGGCACTGGCGACGTACATCAGCCAGCAGGCGGCGGAAAGTGAGCGGAAAAT TATCGGCGCCGTCAAATTGGCACTCATGATTTCAGGCTCGGGCAACCCCGGCCATCCGCAATGGAATCAAACCAAAAAAC ACATGCTGCGCCTGATCGGGGAGGGCATCGCCATCAACCCCCATTACCGCAAGATCACGCCCATCGTGGCAGACGAACTG GCGCGCTGGGGGGACTGGAAAAACGCCACCTGGATCTGGGAGTCCGTGCTGGCATCCCGTCCCTACATTGTGGGCATCAT GGTCAACATTGCGCGTGGCTACGCCCAGCAGGGGGACAACGACAAGGCGTTTGCCTACCTGGCTCGCTGCAAAAAGCTGC AACCGCAGGCCGTTTCCGTGCGCGCGCTGGAGGTGATCCTGCTGGGGCACGTTGGCAACGAGGCTGAAGCCACGCGGCTG GCAAAACAGTACCTGAAAGACGGTACTTACAACTACGACCTGCTCAACGCAGCTTGGCTGCTGGGCACACAGAACAACGA CCCTGACCTGGCCATCGAGGCCATCAAGTTGCGCAACAAGGGCTGGCCTGACCAGGAGATCGATGGATTGCTCAAACTGG GCGATCTCTTCGCGGCACAGAAAAAGGATGATGCCAGGGCGCTGGCATCCTACCGGGCTGCCCTGAAGGCCGCACCTCAC AACCTGAGGGACGCCGTCCGGCAGAGAATCCCGGCGGCCTATCTGCCCAGGCTCTAA
Upstream 100 bases:
>100_bases TGGGGAGCCTTTTGAAGAAGTGGGCATTGCGCACCTTGAAATGTTCATGATGCTTTGATTCAGGGCCTGGTCAATCATCA GCGAATCACCACCGTCTCTC
Downstream 100 bases:
>100_bases GAGCCTGTTCACGATCTACAGGGGGCCGCGTTGGGACGCAATCGGGATGAGTTGCTCGCCCACGTTGCGCCGCATGGGCT TGTGCCCATGCAAGCAATTG
Product: O-antigen polymerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 738; Mature: 737
Protein sequence:
>738_residues MSKKKRKIAGTSTAGEATPLARPAGVPAAAARNDWTVIIFACMLFLVAAIGAPYEEMLQDTLKSIVVSFAALGAGLLFFW RQRQRHEYFHWHALMGFPLALMAYALGSMVWSHTYLAGVEAIRWFIFSLLLWLGLNTFTREKSPSLFWGIHAGAVVASLW TALQFWIDFRFFSQGPNPASTFVNRNFFAEYVVCTLPFSALLIARAGKPQEIAWLTFTTAFNIVALLMTGTRSALATLWV LLFLVLPLAGFFYRRQLACFAWNLTQRLAVIALLLVTIVGLGLIHTGNPKIAGELNGRNALERGIFRTVSVVTDSDEFRT GSLSVRLTMWKATGRMIQDRPLSGVGAGAWEVNGPLYQTAGSQLETDYYAHNEPLQLLAEYGLVGWLALAGLLGYLGLAA WRTLGDRRPEAMDEGPVRAAALACLLALLMVSNAGFAWRLASTGALFAVLLGLLAASDARLGYRGFSGGSRLPWHPVLSR TAMWALAASLALATYISQQAAESERKIIGAVKLALMISGSGNPGHPQWNQTKKHMLRLIGEGIAINPHYRKITPIVADEL ARWGDWKNATWIWESVLASRPYIVGIMVNIARGYAQQGDNDKAFAYLARCKKLQPQAVSVRALEVILLGHVGNEAEATRL AKQYLKDGTYNYDLLNAAWLLGTQNNDPDLAIEAIKLRNKGWPDQEIDGLLKLGDLFAAQKKDDARALASYRAALKAAPH NLRDAVRQRIPAAYLPRL
Sequences:
>Translated_738_residues MSKKKRKIAGTSTAGEATPLARPAGVPAAAARNDWTVIIFACMLFLVAAIGAPYEEMLQDTLKSIVVSFAALGAGLLFFW RQRQRHEYFHWHALMGFPLALMAYALGSMVWSHTYLAGVEAIRWFIFSLLLWLGLNTFTREKSPSLFWGIHAGAVVASLW TALQFWIDFRFFSQGPNPASTFVNRNFFAEYVVCTLPFSALLIARAGKPQEIAWLTFTTAFNIVALLMTGTRSALATLWV LLFLVLPLAGFFYRRQLACFAWNLTQRLAVIALLLVTIVGLGLIHTGNPKIAGELNGRNALERGIFRTVSVVTDSDEFRT GSLSVRLTMWKATGRMIQDRPLSGVGAGAWEVNGPLYQTAGSQLETDYYAHNEPLQLLAEYGLVGWLALAGLLGYLGLAA WRTLGDRRPEAMDEGPVRAAALACLLALLMVSNAGFAWRLASTGALFAVLLGLLAASDARLGYRGFSGGSRLPWHPVLSR TAMWALAASLALATYISQQAAESERKIIGAVKLALMISGSGNPGHPQWNQTKKHMLRLIGEGIAINPHYRKITPIVADEL ARWGDWKNATWIWESVLASRPYIVGIMVNIARGYAQQGDNDKAFAYLARCKKLQPQAVSVRALEVILLGHVGNEAEATRL AKQYLKDGTYNYDLLNAAWLLGTQNNDPDLAIEAIKLRNKGWPDQEIDGLLKLGDLFAAQKKDDARALASYRAALKAAPH NLRDAVRQRIPAAYLPRL >Mature_737_residues SKKKRKIAGTSTAGEATPLARPAGVPAAAARNDWTVIIFACMLFLVAAIGAPYEEMLQDTLKSIVVSFAALGAGLLFFWR QRQRHEYFHWHALMGFPLALMAYALGSMVWSHTYLAGVEAIRWFIFSLLLWLGLNTFTREKSPSLFWGIHAGAVVASLWT ALQFWIDFRFFSQGPNPASTFVNRNFFAEYVVCTLPFSALLIARAGKPQEIAWLTFTTAFNIVALLMTGTRSALATLWVL LFLVLPLAGFFYRRQLACFAWNLTQRLAVIALLLVTIVGLGLIHTGNPKIAGELNGRNALERGIFRTVSVVTDSDEFRTG SLSVRLTMWKATGRMIQDRPLSGVGAGAWEVNGPLYQTAGSQLETDYYAHNEPLQLLAEYGLVGWLALAGLLGYLGLAAW RTLGDRRPEAMDEGPVRAAALACLLALLMVSNAGFAWRLASTGALFAVLLGLLAASDARLGYRGFSGGSRLPWHPVLSRT AMWALAASLALATYISQQAAESERKIIGAVKLALMISGSGNPGHPQWNQTKKHMLRLIGEGIAINPHYRKITPIVADELA RWGDWKNATWIWESVLASRPYIVGIMVNIARGYAQQGDNDKAFAYLARCKKLQPQAVSVRALEVILLGHVGNEAEATRLA KQYLKDGTYNYDLLNAAWLLGTQNNDPDLAIEAIKLRNKGWPDQEIDGLLKLGDLFAAQKKDDARALASYRAALKAAPHN LRDAVRQRIPAAYLPRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81141; Mature: 81010
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKKRKIAGTSTAGEATPLARPAGVPAAAARNDWTVIIFACMLFLVAAIGAPYEEMLQD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH TLKSIVVSFAALGAGLLFFWRQRQRHEYFHWHALMGFPLALMAYALGSMVWSHTYLAGVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIRWFIFSLLLWLGLNTFTREKSPSLFWGIHAGAVVASLWTALQFWIDFRFFSQGPNPAS HHHHHHHHHHHHHCCCHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH TFVNRNFFAEYVVCTLPFSALLIARAGKPQEIAWLTFTTAFNIVALLMTGTRSALATLWV HHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCHHHHHHHHH LLFLVLPLAGFFYRRQLACFAWNLTQRLAVIALLLVTIVGLGLIHTGNPKIAGELNGRNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCEEEECCCHHH LERGIFRTVSVVTDSDEFRTGSLSVRLTMWKATGRMIQDRPLSGVGAGAWEVNGPLYQTA HHHHHHHHHHEEECCCCCEECCEEEEEEEEECCCCHHHCCCCCCCCCCCEECCCCHHHCC GSQLETDYYAHNEPLQLLAEYGLVGWLALAGLLGYLGLAAWRTLGDRRPEAMDEGPVRAA CCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH ALACLLALLMVSNAGFAWRLASTGALFAVLLGLLAASDARLGYRGFSGGSRLPWHPVLSR HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH TAMWALAASLALATYISQQAAESERKIIGAVKLALMISGSGNPGHPQWNQTKKHMLRLIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHC EGIAINPHYRKITPIVADELARWGDWKNATWIWESVLASRPYIVGIMVNIARGYAQQGDN CCCEECCCCHHCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCC DKAFAYLARCKKLQPQAVSVRALEVILLGHVGNEAEATRLAKQYLKDGTYNYDLLNAAWL CHHHHHHHHHHHCCCCHHHHHHHHHEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHEE LGTQNNDPDLAIEAIKLRNKGWPDQEIDGLLKLGDLFAAQKKDDARALASYRAALKAAPH EECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCH NLRDAVRQRIPAAYLPRL HHHHHHHHHCCHHHCCCC >Mature Secondary Structure SKKKRKIAGTSTAGEATPLARPAGVPAAAARNDWTVIIFACMLFLVAAIGAPYEEMLQD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH TLKSIVVSFAALGAGLLFFWRQRQRHEYFHWHALMGFPLALMAYALGSMVWSHTYLAGVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIRWFIFSLLLWLGLNTFTREKSPSLFWGIHAGAVVASLWTALQFWIDFRFFSQGPNPAS HHHHHHHHHHHHHCCCHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH TFVNRNFFAEYVVCTLPFSALLIARAGKPQEIAWLTFTTAFNIVALLMTGTRSALATLWV HHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCHHHHHHHHH LLFLVLPLAGFFYRRQLACFAWNLTQRLAVIALLLVTIVGLGLIHTGNPKIAGELNGRNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCEEEECCCHHH LERGIFRTVSVVTDSDEFRTGSLSVRLTMWKATGRMIQDRPLSGVGAGAWEVNGPLYQTA HHHHHHHHHHEEECCCCCEECCEEEEEEEEECCCCHHHCCCCCCCCCCCEECCCCHHHCC GSQLETDYYAHNEPLQLLAEYGLVGWLALAGLLGYLGLAAWRTLGDRRPEAMDEGPVRAA CCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH ALACLLALLMVSNAGFAWRLASTGALFAVLLGLLAASDARLGYRGFSGGSRLPWHPVLSR HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH TAMWALAASLALATYISQQAAESERKIIGAVKLALMISGSGNPGHPQWNQTKKHMLRLIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHC EGIAINPHYRKITPIVADELARWGDWKNATWIWESVLASRPYIVGIMVNIARGYAQQGDN CCCEECCCCHHCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCC DKAFAYLARCKKLQPQAVSVRALEVILLGHVGNEAEATRLAKQYLKDGTYNYDLLNAAWL CHHHHHHHHHHHCCCCHHHHHHHHHEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHEE LGTQNNDPDLAIEAIKLRNKGWPDQEIDGLLKLGDLFAAQKKDDARALASYRAALKAAPH EECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCH NLRDAVRQRIPAAYLPRL HHHHHHHHHCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA