| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91788368
Identifier: 91788368
GI number: 91788368
Start: 2621427
End: 2621777
Strand: Direct
Name: 91788368
Synonym: Bpro_2505
Alternate gene names: NA
Gene position: 2621427-2621777 (Clockwise)
Preceding gene: 91788362
Following gene: 91788369
Centisome position: 50.41
GC content: 64.1
Gene sequence:
>351_bases ATGGCCCGCAAGGTGTTGTCTTTCCTGCTAATTCTGTCGCTGTTCTGGCAGTCGGCCGCTATCGCCGGCGTCTACGCACT GACGGAGATCGAGGAAACAGGCCATGTGGTCTTGCATTGGCAGGACTCGGAGCACCATCACCATGATGACGGCGCTCTGC ATGCCGACGACTCGGGCGGCACCGTCCAGCACATGCATGCGGACAGCGCGAGCAACTCCCCGGGCTTGCTGACCGCGGGC TGGGACACGCTGCCGGCGCTGCATTCCGGTAGACCGGCCATCCTGGCCGAACCACCATTTCCCTCTGCGTTCCCGCAGGG CCTTTTGCGGCCCCCGAGAACGCCCATCTGA
Upstream 100 bases:
>100_bases AGGGAAAAAAGTGGGAAGACCTTGCGGCCGTGGCGGAGTTTACTGCTGAATATGCTTTACGTCCAAAAAAACTAAAGCGC AATGCCACTAGAATTGCGCG
Downstream 100 bases:
>100_bases CCCACGGTGCGGCTGTGTCAGCCGTGGGCCTCGTCATGCTCAGTCGAGCGTGACGAGGCTGATCCCAATTTCCACCGCTC CCCAAACAACTGCGCCAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MARKVLSFLLILSLFWQSAAIAGVYALTEIEETGHVVLHWQDSEHHHHDDGALHADDSGGTVQHMHADSASNSPGLLTAG WDTLPALHSGRPAILAEPPFPSAFPQGLLRPPRTPI
Sequences:
>Translated_116_residues MARKVLSFLLILSLFWQSAAIAGVYALTEIEETGHVVLHWQDSEHHHHDDGALHADDSGGTVQHMHADSASNSPGLLTAG WDTLPALHSGRPAILAEPPFPSAFPQGLLRPPRTPI >Mature_115_residues ARKVLSFLLILSLFWQSAAIAGVYALTEIEETGHVVLHWQDSEHHHHDDGALHADDSGGTVQHMHADSASNSPGLLTAGW DTLPALHSGRPAILAEPPFPSAFPQGLLRPPRTPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12509; Mature: 12378
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKVLSFLLILSLFWQSAAIAGVYALTEIEETGHVVLHWQDSEHHHHDDGALHADDSGG CHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCCCCCCCEEECCCCC TVQHMHADSASNSPGLLTAGWDTLPALHSGRPAILAEPPFPSAFPQGLLRPPRTPI EEEEEECCCCCCCCCEEEECCCCCCHHHCCCCEEEECCCCCCCCCHHCCCCCCCCC >Mature Secondary Structure ARKVLSFLLILSLFWQSAAIAGVYALTEIEETGHVVLHWQDSEHHHHDDGALHADDSGG HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCCCCCCCEEECCCCC TVQHMHADSASNSPGLLTAGWDTLPALHSGRPAILAEPPFPSAFPQGLLRPPRTPI EEEEEECCCCCCCCCEEEECCCCCCHHHCCCCEEEECCCCCCCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA