| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is zupT [H]
Identifier: 91788357
GI number: 91788357
Start: 2612662
End: 2613453
Strand: Direct
Name: zupT [H]
Synonym: Bpro_2494
Alternate gene names: 91788357
Gene position: 2612662-2613453 (Clockwise)
Preceding gene: 91788356
Following gene: 91788358
Centisome position: 50.24
GC content: 65.4
Gene sequence:
>792_bases ATGCTGCTCGCTTCCATCGTAATGGCCTGCTTGCTGGGCGGCGTCCTGAGTGTGGTCGTTGCAGGTTTCCTGCTGAAGGG TTTGCCGCAGCACTGGCTGCCGCGCATGGTCGGCTTCTCGGCGGGCTTGCTGCTGGGCGCCGCAATGCTCTCGGTCCTGC CCGAGGCCTTTGAATCGGGGGCCGATGCCCATACGCTGTTTGTCGTGCTGCTGGCAGGGTTCGTCGGCTTTTATGCGCTG CAGCGCACGGCGCTCTGGCGCCATAGCCACAGCACGCCGGATGAGGCCGGCCAATCGACCCAGACGCACACCCATCACAC GCACGCCCACGCCCCTGGCCTGGGGCGGGAAACCGTGCTGACCGTGTTGATCGGCGACGGTTTTCATAATTTTGTCGACG GCGTCCTGATTGCGGCCGCTTTTCTGACGGACCCTGCGCTCGGCTGGGCGACCGCGATCGCCGTCATCGCCCATGAGATC CCGCAGGAGGCCGGGGATTTTGTGCTGCTGCTGGCCTCTGGCTTGGGCTTTCGCCGGGCGCTGGCGCTCAATGCGCTGTC CGGACTGGCGTCGGTGCTGGGTGGCCTGGTCGGGTATTGGGGCCTTTCGCATGCGCAGGCTTTTTTGCCTTATGCGCTGG TGTTGGCGGCCGCCAGCTTTATCTACATCGCCATTGCGGATTTGCTGCCGTACCTGCGCCGCGAGCCTGCTGGCGCGCAG ATCGCCTGGCAGACCGTGGCGCTGACGGCCGGTCTGGTGGCTGCTGCGTGGCTATCTGCGTCTCACGGATGA
Upstream 100 bases:
>100_bases GATCGCGCGCCGCGCGCCCTATGTTTCCGGCGGGCTCATCCTGCTGGTCGGCCTGTATGTCGGATACCACGGCTACATCG GCCTGGCCGGAGGCTAAGCC
Downstream 100 bases:
>100_bases CTCGCACAGGCTGAACCGCGCAGGCTCCATGGGCTACCATCTCCCAAAAAGGAGACAAGGATGAACATTCAACCAGCGCG GACCACTTGCATGCAAATGA
Product: zinc/iron permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MLLASIVMACLLGGVLSVVVAGFLLKGLPQHWLPRMVGFSAGLLLGAAMLSVLPEAFESGADAHTLFVVLLAGFVGFYAL QRTALWRHSHSTPDEAGQSTQTHTHHTHAHAPGLGRETVLTVLIGDGFHNFVDGVLIAAAFLTDPALGWATAIAVIAHEI PQEAGDFVLLLASGLGFRRALALNALSGLASVLGGLVGYWGLSHAQAFLPYALVLAAASFIYIAIADLLPYLRREPAGAQ IAWQTVALTAGLVAAAWLSASHG
Sequences:
>Translated_263_residues MLLASIVMACLLGGVLSVVVAGFLLKGLPQHWLPRMVGFSAGLLLGAAMLSVLPEAFESGADAHTLFVVLLAGFVGFYAL QRTALWRHSHSTPDEAGQSTQTHTHHTHAHAPGLGRETVLTVLIGDGFHNFVDGVLIAAAFLTDPALGWATAIAVIAHEI PQEAGDFVLLLASGLGFRRALALNALSGLASVLGGLVGYWGLSHAQAFLPYALVLAAASFIYIAIADLLPYLRREPAGAQ IAWQTVALTAGLVAAAWLSASHG >Mature_263_residues MLLASIVMACLLGGVLSVVVAGFLLKGLPQHWLPRMVGFSAGLLLGAAMLSVLPEAFESGADAHTLFVVLLAGFVGFYAL QRTALWRHSHSTPDEAGQSTQTHTHHTHAHAPGLGRETVLTVLIGDGFHNFVDGVLIAAAFLTDPALGWATAIAVIAHEI PQEAGDFVLLLASGLGFRRALALNALSGLASVLGGLVGYWGLSHAQAFLPYALVLAAASFIYIAIADLLPYLRREPAGAQ IAWQTVALTAGLVAAAWLSASHG
Specific function: Mediates zinc uptake. May also transport other divalent cations [H]
COG id: COG0428
COG function: function code P; Predicted divalent heavy-metal cations transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily [H]
Homologues:
Organism=Homo sapiens, GI187936949, Length=109, Percent_Identity=39.4495412844037, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI55741750, Length=109, Percent_Identity=39.4495412844037, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI223633937, Length=113, Percent_Identity=36.283185840708, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI223633939, Length=113, Percent_Identity=36.283185840708, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI153252201, Length=111, Percent_Identity=38.7387387387387, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI205830426, Length=119, Percent_Identity=36.9747899159664, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI153252214, Length=110, Percent_Identity=38.1818181818182, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI190358541, Length=113, Percent_Identity=37.1681415929204, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI205830424, Length=113, Percent_Identity=37.1681415929204, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI190360568, Length=113, Percent_Identity=37.1681415929204, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI205830405, Length=132, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI40255101, Length=282, Percent_Identity=27.6595744680851, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI190014617, Length=286, Percent_Identity=27.972027972028, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI205830407, Length=127, Percent_Identity=33.8582677165354, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI206597541, Length=134, Percent_Identity=40.2985074626866, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI206597539, Length=134, Percent_Identity=40.2985074626866, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI24586665, Length=127, Percent_Identity=33.8582677165354, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI205830403, Length=127, Percent_Identity=33.8582677165354, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI117553619, Length=119, Percent_Identity=37.8151260504202, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI117553608, Length=119, Percent_Identity=37.8151260504202, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI115430255, Length=113, Percent_Identity=37.1681415929204, Blast_Score=64, Evalue=1e-10, Organism=Caenorhabditis elegans, GI193209531, Length=231, Percent_Identity=27.2727272727273, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI71998183, Length=150, Percent_Identity=32, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17538884, Length=109, Percent_Identity=40.3669724770642, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71994730, Length=241, Percent_Identity=27.3858921161826, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI32566718, Length=113, Percent_Identity=31.858407079646, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI32566720, Length=113, Percent_Identity=31.858407079646, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71992548, Length=134, Percent_Identity=29.8507462686567, Blast_Score=67, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6322166, Length=223, Percent_Identity=29.5964125560538, Blast_Score=85, Evalue=1e-17, Organism=Drosophila melanogaster, GI161083817, Length=111, Percent_Identity=45.945945945946, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI24664383, Length=111, Percent_Identity=45.945945945946, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI45549201, Length=111, Percent_Identity=38.7387387387387, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI17864610, Length=153, Percent_Identity=28.7581699346405, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003689 [H]
Pfam domain/function: PF02535 Zip [H]
EC number: NA
Molecular weight: Translated: 27380; Mature: 27380
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLASIVMACLLGGVLSVVVAGFLLKGLPQHWLPRMVGFSAGLLLGAAMLSVLPEAFESG CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ADAHTLFVVLLAGFVGFYALQRTALWRHSHSTPDEAGQSTQTHTHHTHAHAPGLGRETVL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHH TVLIGDGFHNFVDGVLIAAAFLTDPALGWATAIAVIAHEIPQEAGDFVLLLASGLGFRRA HHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCHHHH LALNALSGLASVLGGLVGYWGLSHAQAFLPYALVLAAASFIYIAIADLLPYLRREPAGAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH IAWQTVALTAGLVAAAWLSASHG HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLLASIVMACLLGGVLSVVVAGFLLKGLPQHWLPRMVGFSAGLLLGAAMLSVLPEAFESG CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ADAHTLFVVLLAGFVGFYALQRTALWRHSHSTPDEAGQSTQTHTHHTHAHAPGLGRETVL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHH TVLIGDGFHNFVDGVLIAAAFLTDPALGWATAIAVIAHEIPQEAGDFVLLLASGLGFRRA HHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCHHHH LALNALSGLASVLGGLVGYWGLSHAQAFLPYALVLAAASFIYIAIADLLPYLRREPAGAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH IAWQTVALTAGLVAAAWLSASHG HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA