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The map label for this gene is cph2 [H]

Identifier: 91788334

GI number: 91788334

Start: 2580593

End: 2581816

Strand: Direct

Name: cph2 [H]

Synonym: Bpro_2469

Alternate gene names: 91788334

Gene position: 2580593-2581816 (Clockwise)

Preceding gene: 91788333

Following gene: 91788335

Centisome position: 49.62

GC content: 59.8

Gene sequence:

>1224_bases
ATGTCGATCAACAACTTACATTTTCTGGTTGCCGAAGACCATGATTTCCAGCGCAGCACGGTGGTGAGGATGCTTGACGG
CTTGGGCGCAAAGAGTGTCCATGAAGCGGCGGACGGCCATGACGCGTTGACCATCATCCGCGACCCCGATCGGCCCATCG
ATATCGTCATCTGCGACCTTGATATGCCGGGCATGGACGGCATGGAATTCATTCGCCGCCTGGGTGAGTGCGAGTCCCCG
GTGTCGGTCATCATCGCCAGTGCGCTGGAGCGTAACCTGATCGCCTCGGTCGAGACCATGACAGAGGCCTACGGTATCCA
GCTGCTGGGCGTTGTGGAAAAACCGCTCAACCCCGCAAAGCTGGGGCTGCTGATCGAACGCCATAAGGCAACACAGACCC
GGCGGGACCAGCCTGGGACGACAGCTCCATCATTCACGCTGGAGGAGATCGTGGAAGGATTGAGGAACGATGAGTTCGAA
CCCTTTCTTCAACCCAAGGTCGAATTGGCCACCGGGAAAATCAAGGGGGCAGAAGCACTCGCGCGCTGGCGCCATCCTTA
TAGGGGTATCGTCGCCCCCCACGCGTTCATCGGCCGGCTCGAAGATAAGGGCATGATCGATACGCTCATGGAAGTCATGC
TGAGAAAGTCAGCGGCACTGTGCAGGACCTGGCTCAGTGCCGGGCTGCAGGCCACCGTGTCGGTCAACCTGTCGCCCCAA
TCGCTGGGCGACGTGCACCTTGCCGACCGCGTGACGCAGCTTGTGCTCGACCAGGGGCTGGAGCCACGCCATATGGTCCT
CGAGGTAACCGAGTCCGTGGCCACAACCAATGTAGGCAGAGCACTCGAGAACCTCGCGCGCCTGCGCATGAAGGGCTTCG
GCTTGTCTATTGACGATTACGGCACCGGCTACGCCTCAATGCAGCAACTCACGCGAATCGCCTTTACCGAGCTCAAGATC
GATCAATCCTTTGTGACAAACGCAACCAAGCAGGCATCGGCCAGGGTGGTCCTTGAATCGAGTCTCGACATCGCGAGGAA
GCTCAACATCACAGCGGTAGCCGAAGGGGTTGAAACGCAGGCAGACTGGAATTTGCTGCGCCAGCTCGGCTGCGCCTTCG
CACAGGGCTATTTCATCGCAAGGCCGATGGAGGCGGGGGCCTACCTCGATTGGGCTCGGGGTTGGAAACCGCCGGACCCG
CAAGGTACTGTTTCCCCCAGCTAG

Upstream 100 bases:

>100_bases
GTTCCAGCACGAATTGCAACGCCTGAACGCCTATTTAGACGCTCTGTGAAGCGGGTGACCGGCAAAAACCCAAGAAAGGC
CGCGGACGAAAGGATGTGAA

Downstream 100 bases:

>100_bases
CTGGTCAACGTTATTTCGCCGAAATGGTCAAACTTACTGCAGTCAGCCATGTGCCCCGTCATTAGCAGACCGCATTGCCA
TCGCCAGCACAGGGAAGCAA

Product: response regulator receiver/diguanylate phosphodiesterase

Products: NA

Alternate protein names: Bacteriophytochrome cph2 [H]

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MSINNLHFLVAEDHDFQRSTVVRMLDGLGAKSVHEAADGHDALTIIRDPDRPIDIVICDLDMPGMDGMEFIRRLGECESP
VSVIIASALERNLIASVETMTEAYGIQLLGVVEKPLNPAKLGLLIERHKATQTRRDQPGTTAPSFTLEEIVEGLRNDEFE
PFLQPKVELATGKIKGAEALARWRHPYRGIVAPHAFIGRLEDKGMIDTLMEVMLRKSAALCRTWLSAGLQATVSVNLSPQ
SLGDVHLADRVTQLVLDQGLEPRHMVLEVTESVATTNVGRALENLARLRMKGFGLSIDDYGTGYASMQQLTRIAFTELKI
DQSFVTNATKQASARVVLESSLDIARKLNITAVAEGVETQADWNLLRQLGCAFAQGYFIARPMEAGAYLDWARGWKPPDP
QGTVSPS

Sequences:

>Translated_407_residues
MSINNLHFLVAEDHDFQRSTVVRMLDGLGAKSVHEAADGHDALTIIRDPDRPIDIVICDLDMPGMDGMEFIRRLGECESP
VSVIIASALERNLIASVETMTEAYGIQLLGVVEKPLNPAKLGLLIERHKATQTRRDQPGTTAPSFTLEEIVEGLRNDEFE
PFLQPKVELATGKIKGAEALARWRHPYRGIVAPHAFIGRLEDKGMIDTLMEVMLRKSAALCRTWLSAGLQATVSVNLSPQ
SLGDVHLADRVTQLVLDQGLEPRHMVLEVTESVATTNVGRALENLARLRMKGFGLSIDDYGTGYASMQQLTRIAFTELKI
DQSFVTNATKQASARVVLESSLDIARKLNITAVAEGVETQADWNLLRQLGCAFAQGYFIARPMEAGAYLDWARGWKPPDP
QGTVSPS
>Mature_406_residues
SINNLHFLVAEDHDFQRSTVVRMLDGLGAKSVHEAADGHDALTIIRDPDRPIDIVICDLDMPGMDGMEFIRRLGECESPV
SVIIASALERNLIASVETMTEAYGIQLLGVVEKPLNPAKLGLLIERHKATQTRRDQPGTTAPSFTLEEIVEGLRNDEFEP
FLQPKVELATGKIKGAEALARWRHPYRGIVAPHAFIGRLEDKGMIDTLMEVMLRKSAALCRTWLSAGLQATVSVNLSPQS
LGDVHLADRVTQLVLDQGLEPRHMVLEVTESVATTNVGRALENLARLRMKGFGLSIDDYGTGYASMQQLTRIAFTELKID
QSFVTNATKQASARVVLESSLDIARKLNITAVAEGVETQADWNLLRQLGCAFAQGYFIARPMEAGAYLDWARGWKPPDPQ
GTVSPS

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 GGDEF domains [H]

Homologues:

Organism=Escherichia coli, GI87081921, Length=241, Percent_Identity=33.195020746888, Blast_Score=149, Evalue=4e-37,
Organism=Escherichia coli, GI87081845, Length=260, Percent_Identity=34.2307692307692, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1787541, Length=244, Percent_Identity=30.7377049180328, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1788502, Length=259, Percent_Identity=32.8185328185328, Blast_Score=129, Evalue=4e-31,
Organism=Escherichia coli, GI1790496, Length=230, Percent_Identity=30.8695652173913, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI226510982, Length=238, Percent_Identity=33.1932773109244, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1787055, Length=234, Percent_Identity=33.3333333333333, Blast_Score=122, Evalue=5e-29,
Organism=Escherichia coli, GI1786507, Length=253, Percent_Identity=30.4347826086957, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI87081743, Length=272, Percent_Identity=29.7794117647059, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI87081980, Length=266, Percent_Identity=31.5789473684211, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI87082096, Length=149, Percent_Identity=36.9127516778523, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1788849, Length=149, Percent_Identity=36.241610738255, Blast_Score=92, Evalue=8e-20,
Organism=Escherichia coli, GI1787410, Length=152, Percent_Identity=28.2894736842105, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR003018
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515 [H]

Pfam domain/function: PF00563 EAL; PF01590 GAF; PF00990 GGDEF; PF00360 Phytochrome [H]

EC number: NA

Molecular weight: Translated: 44738; Mature: 44607

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSINNLHFLVAEDHDFQRSTVVRMLDGLGAKSVHEAADGHDALTIIRDPDRPIDIVICDL
CCCCCEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEECCCCCEEEEEECC
DMPGMDGMEFIRRLGECESPVSVIIASALERNLIASVETMTEAYGIQLLGVVEKPLNPAK
CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEHHHCCCCHHH
LGLLIERHKATQTRRDQPGTTAPSFTLEEIVEGLRNDEFEPFLQPKVELATGKIKGAEAL
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHH
ARWRHPYRGIVAPHAFIGRLEDKGMIDTLMEVMLRKSAALCRTWLSAGLQATVSVNLSPQ
HHHCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHH
SLGDVHLADRVTQLVLDQGLEPRHMVLEVTESVATTNVGRALENLARLRMKGFGLSIDDY
HCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GTGYASMQQLTRIAFTELKIDQSFVTNATKQASARVVLESSLDIARKLNITAVAEGVETQ
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEECCCHHHHHHCCHHHHHCCCCCH
ADWNLLRQLGCAFAQGYFIARPMEAGAYLDWARGWKPPDPQGTVSPS
HHHHHHHHHHHHHHCCEEEECCCCCCCEEEHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SINNLHFLVAEDHDFQRSTVVRMLDGLGAKSVHEAADGHDALTIIRDPDRPIDIVICDL
CCCCEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEECCCCCEEEEEECC
DMPGMDGMEFIRRLGECESPVSVIIASALERNLIASVETMTEAYGIQLLGVVEKPLNPAK
CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEHHHCCCCHHH
LGLLIERHKATQTRRDQPGTTAPSFTLEEIVEGLRNDEFEPFLQPKVELATGKIKGAEAL
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHH
ARWRHPYRGIVAPHAFIGRLEDKGMIDTLMEVMLRKSAALCRTWLSAGLQATVSVNLSPQ
HHHCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHH
SLGDVHLADRVTQLVLDQGLEPRHMVLEVTESVATTNVGRALENLARLRMKGFGLSIDDY
HCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GTGYASMQQLTRIAFTELKIDQSFVTNATKQASARVVLESSLDIARKLNITAVAEGVETQ
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEECCCHHHHHHCCHHHHHCCCCCH
ADWNLLRQLGCAFAQGYFIARPMEAGAYLDWARGWKPPDPQGTVSPS
HHHHHHHHHHHHHHCCEEEECCCCCCCEEEHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231; 10978170; 11063585 [H]