| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788327
Identifier: 91788327
GI number: 91788327
Start: 2567892
End: 2568491
Strand: Direct
Name: 91788327
Synonym: Bpro_2462
Alternate gene names: NA
Gene position: 2567892-2568491 (Clockwise)
Preceding gene: 91788326
Following gene: 91788328
Centisome position: 49.38
GC content: 63.0
Gene sequence:
>600_bases ATGGAAATTCTGATCAACATATTGCGCGCTGCAGCGCGCTTGCGCCCAGGCAGCGCCTTGGCTGTTGTGGCATTGGGCAT GGTGCTCTTGCCCGGCAAGGCCAGCGCGGCCGACGAATCGGTGGAATACGCCGTCAAAGCGGCTTTTCTGCACAAGTTCG GCTCCTTTGTCGAATGGCCTGCAACAGCCTTTGCTTCACCGACCAGTCCGTTTCAGCTGTGCGTCGTGGGCGAGGATCCG TTCGGTGCCGCCCTCGACAAGGCCGTCAGCGGCCAGCAGATCGCCCGACGGCCGGTCGAGGTGCGGCGACTGAAGATGGT CAAACCGGACTCAGGCTGCCACATCGTGTACCTTGCCGCCTCGGAGGCGCAGCGCAGCGCCCAGATCATCGAAGCGCTAC GCGGCAGCAGCGTGCTAACGGTGAGTGATGGCCGGTCGCCCGGGGCGGTCACGGGAATCATCAATTTCGTCATCAAGGAT GATCGGGTGCGCTTTGACATCGACGACGAAGCCGCCGCGCAGAACAGGCTGGCCATCAGTTCCAAGCTGCTGAGCGTAGC GCTCAGCGTCAAGCCCAGACGGGTCGGGGAGGGCCGTTAA
Upstream 100 bases:
>100_bases TTTCGTTGACCGCATTCAACCTGCTTGACAAGGGTCATCCGGAGTTCGGTTCCGGATCGGCGCGCAGTGAGATCGGGCGC AGCTTCTACGCAAAAATGCT
Downstream 100 bases:
>100_bases ATGGACTGGCTTGCAAACGTTCCGATTCGCACCAAACTGCTGCTGATCAGCGTGCTGACCAGCGCGATTGCGCTGCTGCT GGCCGGTGCGGCCATCATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MEILINILRAAARLRPGSALAVVALGMVLLPGKASAADESVEYAVKAAFLHKFGSFVEWPATAFASPTSPFQLCVVGEDP FGAALDKAVSGQQIARRPVEVRRLKMVKPDSGCHIVYLAASEAQRSAQIIEALRGSSVLTVSDGRSPGAVTGIINFVIKD DRVRFDIDDEAAAQNRLAISSKLLSVALSVKPRRVGEGR
Sequences:
>Translated_199_residues MEILINILRAAARLRPGSALAVVALGMVLLPGKASAADESVEYAVKAAFLHKFGSFVEWPATAFASPTSPFQLCVVGEDP FGAALDKAVSGQQIARRPVEVRRLKMVKPDSGCHIVYLAASEAQRSAQIIEALRGSSVLTVSDGRSPGAVTGIINFVIKD DRVRFDIDDEAAAQNRLAISSKLLSVALSVKPRRVGEGR >Mature_199_residues MEILINILRAAARLRPGSALAVVALGMVLLPGKASAADESVEYAVKAAFLHKFGSFVEWPATAFASPTSPFQLCVVGEDP FGAALDKAVSGQQIARRPVEVRRLKMVKPDSGCHIVYLAASEAQRSAQIIEALRGSSVLTVSDGRSPGAVTGIINFVIKD DRVRFDIDDEAAAQNRLAISSKLLSVALSVKPRRVGEGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21139; Mature: 21139
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEILINILRAAARLRPGSALAVVALGMVLLPGKASAADESVEYAVKAAFLHKFGSFVEWP CHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCC ATAFASPTSPFQLCVVGEDPFGAALDKAVSGQQIARRPVEVRRLKMVKPDSGCHIVYLAA CHHCCCCCCCEEEEEECCCCCCHHHHHHCCCHHHHHCCHHHHHEEEECCCCCCEEEEEEC SEAQRSAQIIEALRGSSVLTVSDGRSPGAVTGIINFVIKDDRVRFDIDDEAAAQNRLAIS CCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHEEEECCEEEEECCCHHHHHHHHHHH SKLLSVALSVKPRRVGEGR HHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MEILINILRAAARLRPGSALAVVALGMVLLPGKASAADESVEYAVKAAFLHKFGSFVEWP CHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCC ATAFASPTSPFQLCVVGEDPFGAALDKAVSGQQIARRPVEVRRLKMVKPDSGCHIVYLAA CHHCCCCCCCEEEEEECCCCCCHHHHHHCCCHHHHHCCHHHHHEEEECCCCCCEEEEEEC SEAQRSAQIIEALRGSSVLTVSDGRSPGAVTGIINFVIKDDRVRFDIDDEAAAQNRLAIS CCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHEEEECCEEEEECCCHHHHHHHHHHH SKLLSVALSVKPRRVGEGR HHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA