Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is katE [H]

Identifier: 91788318

GI number: 91788318

Start: 2557844

End: 2560018

Strand: Reverse

Name: katE [H]

Synonym: Bpro_2453

Alternate gene names: 91788318

Gene position: 2560018-2557844 (Counterclockwise)

Preceding gene: 91788319

Following gene: 91788314

Centisome position: 49.23

GC content: 59.22

Gene sequence:

>2175_bases
ATGCCGCGACCCAAGCGCAAAGCTGCTGGCCCCACCCGGCCAGCGGACGGCGCCAGAGACAAGCAAACCCAGCTTGATGC
CTTTACTGCCGGCTCAGCCAATGTCTTGACCACCAACCAGGGTCTACAGATTCCGGACAATCACAACTCCCTGAAGGGTG
GTGTTCGCGGCCCTACCCTGCTGGAAGATTTCATCCTCCGCGAAAAAATCACGCATTTTGATCACGAGCGCATTCCGGAA
CGTGTCGTACACGCCCGGGGTTCAGGCGCACACGGCTATTTCAAGCCCTACAAGTCGATGGTGCAGTACACCAGCGCCGC
CTTTTTGCAGGACCCTGCCATTGAAACGCCTGTATTTGTGAGGTTTTCAACCGTGGCCGGCTCCCGGGGTTCGGCAGACA
CGGTGCGGGATGTGCGGGGGTTCGCGGTCAAGTTTTACACCGCCGAAGGCAACTACGATTTGGTGGGCAACAACATTCCT
GTTTTCTTTATCCAGGACGCCATCAAATTTCCCGACCTGATCCATGCGGTCAAACCCGAACCGCACCATGAGATGCCGCA
AGCAGCAAGTGCCCATGACACTTTCTGGGATTTCGCGTCGCTGATGCCCGAGTCAACCCACATGTTGATGTGGACGATGT
CAGACCGCGCCCTGCCGCGCAGCTTTCGGATGATGGAAGGGTTCGGTGTTCATGCTTTCCGCTTTATCAATGCGCGGGGG
GATTCTCATTTCGTCAAGTTTCACTGGAAGCCAAAACTGGGGGTGCATGGCCTGGCTTGGGATGAGGCGCAGAAGATTGC
CGGCAAAGACCCCGACTTTCACCGGCGCGACCTGTGGGAAGCGATTGAGAGCGGTCATTTTCCCGAGTGGGAGCTGGGCG
TTCAGATCGTGGACGACGGCCAGGAGAGCGAGCTTGGCTTTGACATTCTGGACGCTACCAAACTCATTCCAGAGGAGCAG
GTTCCCGTCCAGATCATTGGCAAGCTGGTGCTCAACCGCAATCCGGATAATTTTTTCGCCGAAACCGAACAGGTGGCATT
TCATCCAGGCCACCTTGTGCCAGGCATTGATTTTTCAAACGATCCCCTGTTGCAGGGGCGGCTCTTCTCGTACACCGATA
CCCAGCTGTCCAGGCTCGGCGGTGCGAACTTCCATGAATTACCCATCAATCGGGCAGTTTGCCCAATGCATAACTTCCAG
CGCGACGGGATGCATCGCCAGGCCATCAGCAAGGGACGCGTGGCGTACGAGCCCAATACGCTGGGCAATGGCGCAGAGTA
CCGGGTTGATGGCGCGGCGCAAGGCTTCCAGTCTTACCCCGAGCAACTGGAGCCGCCCAAAATCCGGCGGCGCAGCCCCT
CGTTTGACGATCATTTCTCGCAGGCTACCCTGTTCTGGAACAGCCAGAGCGTTGCCGAGAAAGACCATATCGTCGCAGCG
TTCAGGTTTGAGCTGTCCAAGGTGGATGTGCCGGAAATCCGGCAGCGCATCGTGGACAACCTTGCGCATGTGGACCTGAA
ACTTGCCGGCCGGGTTGCTGTGACTTTGGGCATCGCCGCCCCGGACCCCAAAGCCGCTGCGGGCCGGCTAGGCTTTCGGG
ATTACCGAATCACCAGCAAGGTCGACGAAGATCCCACATTGCGCATGGTTGGCAGGCCGGGCGGTGGCGTGAAGACCCGC
AAGGTGGCCATTCTGGTGGCCAATGGCGTTGAATCCGCCCCTCTCCGTCGCATCCAGCAGGATTTGACGGAAGCCGGCGC
CCTGTGCAAGCTGGTTGCCCAGCACCTGGGTACAGTCAGCACCGCCAGCGGCCGCCAGCTGGCAGTCGACCATACCTTTG
CCAACATGCCGTCCGTCATGTTTGATGCCGTGCTGATTCCCGGTGGTGCGTCCAGCGCCGCAGCGCTGAGCGGGCTCGGC
GAGGCGGTTCACTTTGTGCTGGAGGCTTACAAACACGGCAAGACCATTTGTGCGGTGAACGATGGCGTGCAGTTGCTCGG
CACGCTGGGCTTCAGCCAGGGGAAAAATCCCGAGCTGGTAACAGTACCCACAGTCGGTGTCCTGATTGCCGACGGGCGCA
AGGTGCTGGATGGACAGGTGTCACAAGACTTCATGGCCGCCATTGCACTGCACCGCCACTGGGACCGCCTCAACATTGAC
GCCATTCCGGCCTGA

Upstream 100 bases:

>100_bases
TTACCCGACAGCCGTCTCTGCACTGGCCACAAGGAGTGGTCTTCCAACACGCCGAGGCGGGTCTTTTTCCAATTCTCAAG
CCCTCAAACAAGGAATCTAC

Downstream 100 bases:

>100_bases
CCATGCAGTCATGGATATGCAGGCTCGGTACGTTGCCCGCGTAGCGAACCTCAGGGTCTCAGGGTTGTAGGGTCAACTGG
TGCGCGAACCCTGCCGGGTT

Product: catalase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 724; Mature: 723

Protein sequence:

>724_residues
MPRPKRKAAGPTRPADGARDKQTQLDAFTAGSANVLTTNQGLQIPDNHNSLKGGVRGPTLLEDFILREKITHFDHERIPE
RVVHARGSGAHGYFKPYKSMVQYTSAAFLQDPAIETPVFVRFSTVAGSRGSADTVRDVRGFAVKFYTAEGNYDLVGNNIP
VFFIQDAIKFPDLIHAVKPEPHHEMPQAASAHDTFWDFASLMPESTHMLMWTMSDRALPRSFRMMEGFGVHAFRFINARG
DSHFVKFHWKPKLGVHGLAWDEAQKIAGKDPDFHRRDLWEAIESGHFPEWELGVQIVDDGQESELGFDILDATKLIPEEQ
VPVQIIGKLVLNRNPDNFFAETEQVAFHPGHLVPGIDFSNDPLLQGRLFSYTDTQLSRLGGANFHELPINRAVCPMHNFQ
RDGMHRQAISKGRVAYEPNTLGNGAEYRVDGAAQGFQSYPEQLEPPKIRRRSPSFDDHFSQATLFWNSQSVAEKDHIVAA
FRFELSKVDVPEIRQRIVDNLAHVDLKLAGRVAVTLGIAAPDPKAAAGRLGFRDYRITSKVDEDPTLRMVGRPGGGVKTR
KVAILVANGVESAPLRRIQQDLTEAGALCKLVAQHLGTVSTASGRQLAVDHTFANMPSVMFDAVLIPGGASSAAALSGLG
EAVHFVLEAYKHGKTICAVNDGVQLLGTLGFSQGKNPELVTVPTVGVLIADGRKVLDGQVSQDFMAAIALHRHWDRLNID
AIPA

Sequences:

>Translated_724_residues
MPRPKRKAAGPTRPADGARDKQTQLDAFTAGSANVLTTNQGLQIPDNHNSLKGGVRGPTLLEDFILREKITHFDHERIPE
RVVHARGSGAHGYFKPYKSMVQYTSAAFLQDPAIETPVFVRFSTVAGSRGSADTVRDVRGFAVKFYTAEGNYDLVGNNIP
VFFIQDAIKFPDLIHAVKPEPHHEMPQAASAHDTFWDFASLMPESTHMLMWTMSDRALPRSFRMMEGFGVHAFRFINARG
DSHFVKFHWKPKLGVHGLAWDEAQKIAGKDPDFHRRDLWEAIESGHFPEWELGVQIVDDGQESELGFDILDATKLIPEEQ
VPVQIIGKLVLNRNPDNFFAETEQVAFHPGHLVPGIDFSNDPLLQGRLFSYTDTQLSRLGGANFHELPINRAVCPMHNFQ
RDGMHRQAISKGRVAYEPNTLGNGAEYRVDGAAQGFQSYPEQLEPPKIRRRSPSFDDHFSQATLFWNSQSVAEKDHIVAA
FRFELSKVDVPEIRQRIVDNLAHVDLKLAGRVAVTLGIAAPDPKAAAGRLGFRDYRITSKVDEDPTLRMVGRPGGGVKTR
KVAILVANGVESAPLRRIQQDLTEAGALCKLVAQHLGTVSTASGRQLAVDHTFANMPSVMFDAVLIPGGASSAAALSGLG
EAVHFVLEAYKHGKTICAVNDGVQLLGTLGFSQGKNPELVTVPTVGVLIADGRKVLDGQVSQDFMAAIALHRHWDRLNID
AIPA
>Mature_723_residues
PRPKRKAAGPTRPADGARDKQTQLDAFTAGSANVLTTNQGLQIPDNHNSLKGGVRGPTLLEDFILREKITHFDHERIPER
VVHARGSGAHGYFKPYKSMVQYTSAAFLQDPAIETPVFVRFSTVAGSRGSADTVRDVRGFAVKFYTAEGNYDLVGNNIPV
FFIQDAIKFPDLIHAVKPEPHHEMPQAASAHDTFWDFASLMPESTHMLMWTMSDRALPRSFRMMEGFGVHAFRFINARGD
SHFVKFHWKPKLGVHGLAWDEAQKIAGKDPDFHRRDLWEAIESGHFPEWELGVQIVDDGQESELGFDILDATKLIPEEQV
PVQIIGKLVLNRNPDNFFAETEQVAFHPGHLVPGIDFSNDPLLQGRLFSYTDTQLSRLGGANFHELPINRAVCPMHNFQR
DGMHRQAISKGRVAYEPNTLGNGAEYRVDGAAQGFQSYPEQLEPPKIRRRSPSFDDHFSQATLFWNSQSVAEKDHIVAAF
RFELSKVDVPEIRQRIVDNLAHVDLKLAGRVAVTLGIAAPDPKAAAGRLGFRDYRITSKVDEDPTLRMVGRPGGGVKTRK
VAILVANGVESAPLRRIQQDLTEAGALCKLVAQHLGTVSTASGRQLAVDHTFANMPSVMFDAVLIPGGASSAAALSGLGE
AVHFVLEAYKHGKTICAVNDGVQLLGTLGFSQGKNPELVTVPTVGVLIADGRKVLDGQVSQDFMAAIALHRHWDRLNIDA
IPA

Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]

COG id: COG0753

COG function: function code P; Catalase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the catalase family. HPII subfamily [H]

Homologues:

Organism=Homo sapiens, GI4557014, Length=444, Percent_Identity=43.9189189189189, Blast_Score=364, Evalue=1e-100,
Organism=Escherichia coli, GI48994891, Length=728, Percent_Identity=54.8076923076923, Blast_Score=781, Evalue=0.0,
Organism=Caenorhabditis elegans, GI25147792, Length=492, Percent_Identity=42.479674796748, Blast_Score=372, Evalue=1e-103,
Organism=Caenorhabditis elegans, GI25151141, Length=502, Percent_Identity=42.4302788844622, Blast_Score=372, Evalue=1e-103,
Organism=Caenorhabditis elegans, GI71998444, Length=451, Percent_Identity=42.7937915742794, Blast_Score=364, Evalue=1e-101,
Organism=Saccharomyces cerevisiae, GI6320462, Length=487, Percent_Identity=39.2197125256673, Blast_Score=315, Evalue=1e-86,
Organism=Saccharomyces cerevisiae, GI6321525, Length=387, Percent_Identity=40.0516795865633, Blast_Score=282, Evalue=1e-76,
Organism=Drosophila melanogaster, GI17981717, Length=496, Percent_Identity=40.3225806451613, Blast_Score=348, Evalue=7e-96,
Organism=Drosophila melanogaster, GI19920968, Length=420, Percent_Identity=41.9047619047619, Blast_Score=338, Evalue=9e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002226
- InterPro:   IPR020835
- InterPro:   IPR010582
- InterPro:   IPR018028
- InterPro:   IPR011614 [H]

Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]

EC number: =1.11.1.6 [H]

Molecular weight: Translated: 79721; Mature: 79590

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPKRKAAGPTRPADGARDKQTQLDAFTAGSANVLTTNQGLQIPDNHNSLKGGVRGPTL
CCCCCCCCCCCCCCCCCCCCCHHHHHEEECCCCEEEECCCCCCCCCCCCCCCCCCCCHHH
LEDFILREKITHFDHERIPERVVHARGSGAHGYFKPYKSMVQYTSAAFLQDPAIETPVFV
HHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEE
RFSTVAGSRGSADTVRDVRGFAVKFYTAEGNYDLVGNNIPVFFIQDAIKFPDLIHAVKPE
EEEEECCCCCCHHHHHHCCCEEEEEEEECCCEEEECCCCCEEEECCHHCCHHHHHHCCCC
PHHEMPQAASAHDTFWDFASLMPESTHMLMWTMSDRALPRSFRMMEGFGVHAFRFINARG
CCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCCCEEEEEEECCC
DSHFVKFHWKPKLGVHGLAWDEAQKIAGKDPDFHRRDLWEAIESGHFPEWELGVQIVDDG
CCEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEECEEEECCC
QESELGFDILDATKLIPEEQVPVQIIGKLVLNRNPDNFFAETEQVAFHPGHLVPGIDFSN
CCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCEEECCCCCCCCCCCCC
DPLLQGRLFSYTDTQLSRLGGANFHELPINRAVCPMHNFQRDGMHRQAISKGRVAYEPNT
CCCCCCEEEECCHHHHHHHCCCCCEECCCCCCCCCCHHHHHCCHHHHHHHCCCEEECCCC
LGNGAEYRVDGAAQGFQSYPEQLEPPKIRRRSPSFDDHFSQATLFWNSQSVAEKDHIVAA
CCCCCEEEECHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCEEEEECCCCCCCHHCEEEE
FRFELSKVDVPEIRQRIVDNLAHVDLKLAGRVAVTLGIAAPDPKAAAGRLGFRDYRITSK
EEEECCCCCHHHHHHHHHHHHHHCCEEEECEEEEEEEECCCCCCHHHCCCCCEEEEECCC
VDEDPTLRMVGRPGGGVKTRKVAILVANGVESAPLRRIQQDLTEAGALCKLVAQHLGTVS
CCCCCCEEEEECCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TASGRQLAVDHTFANMPSVMFDAVLIPGGASSAAALSGLGEAVHFVLEAYKHGKTICAVN
CCCCCEEEEECHHHCCCHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
DGVQLLGTLGFSQGKNPELVTVPTVGVLIADGRKVLDGQVSQDFMAAIALHRHWDRLNID
CCHHHHHHHCCCCCCCCCEEEECCEEEEEECCCEECCCCHHHHHHHHHHHHHCCCCCCCC
AIPA
CCCC
>Mature Secondary Structure 
PRPKRKAAGPTRPADGARDKQTQLDAFTAGSANVLTTNQGLQIPDNHNSLKGGVRGPTL
CCCCCCCCCCCCCCCCCCCCHHHHHEEECCCCEEEECCCCCCCCCCCCCCCCCCCCHHH
LEDFILREKITHFDHERIPERVVHARGSGAHGYFKPYKSMVQYTSAAFLQDPAIETPVFV
HHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEE
RFSTVAGSRGSADTVRDVRGFAVKFYTAEGNYDLVGNNIPVFFIQDAIKFPDLIHAVKPE
EEEEECCCCCCHHHHHHCCCEEEEEEEECCCEEEECCCCCEEEECCHHCCHHHHHHCCCC
PHHEMPQAASAHDTFWDFASLMPESTHMLMWTMSDRALPRSFRMMEGFGVHAFRFINARG
CCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCCCEEEEEEECCC
DSHFVKFHWKPKLGVHGLAWDEAQKIAGKDPDFHRRDLWEAIESGHFPEWELGVQIVDDG
CCEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEECEEEECCC
QESELGFDILDATKLIPEEQVPVQIIGKLVLNRNPDNFFAETEQVAFHPGHLVPGIDFSN
CCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCEEECCCCCCCCCCCCC
DPLLQGRLFSYTDTQLSRLGGANFHELPINRAVCPMHNFQRDGMHRQAISKGRVAYEPNT
CCCCCCEEEECCHHHHHHHCCCCCEECCCCCCCCCCHHHHHCCHHHHHHHCCCEEECCCC
LGNGAEYRVDGAAQGFQSYPEQLEPPKIRRRSPSFDDHFSQATLFWNSQSVAEKDHIVAA
CCCCCEEEECHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCEEEEECCCCCCCHHCEEEE
FRFELSKVDVPEIRQRIVDNLAHVDLKLAGRVAVTLGIAAPDPKAAAGRLGFRDYRITSK
EEEECCCCCHHHHHHHHHHHHHHCCEEEECEEEEEEEECCCCCCHHHCCCCCEEEEECCC
VDEDPTLRMVGRPGGGVKTRKVAILVANGVESAPLRRIQQDLTEAGALCKLVAQHLGTVS
CCCCCCEEEEECCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TASGRQLAVDHTFANMPSVMFDAVLIPGGASSAAALSGLGEAVHFVLEAYKHGKTICAVN
CCCCCEEEEECHHHCCCHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
DGVQLLGTLGFSQGKNPELVTVPTVGVLIADGRKVLDGQVSQDFMAAIALHRHWDRLNID
CCHHHHHHHCCCCCCCCCEEEECCEEEEEECCCEECCCCHHHHHHHHHHHHHCCCCCCCC
AIPA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA